This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Acidithiobacillia
Anticodon = CCC
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.491021 (9 seq.)
>W1711190274
LWRY01000155
Acidithiobacillia
Acidithiobacillus thiooxidans [LWRY]
6559
6486
-
Gly
CCC
[ENA]
¡û
>W1711190313
LWRZ01000029
Acidithiobacillia
Acidithiobacillus thiooxidans [LWRZ]
20038
20111
+
Gly
CCC
[ENA]
¡û
>W1711190417
LWSA01000143
Acidithiobacillia
Acidithiobacillus thiooxidans [LWSA]
7900
7827
-
Gly
CCC
[ENA]
¡û
>W1711190545
LWSB01000182
Acidithiobacillia
Acidithiobacillus thiooxidans [LWSB]
7932
7859
-
Gly
CCC
[ENA]
¡û
>W1711190593
LWSC01000048
Acidithiobacillia
Acidithiobacillus thiooxidans [LWSC]
14069
13996
-
Gly
CCC
[ENA]
¡û
>W1711190654
LWSD01000032
Acidithiobacillia
Acidithiobacillus thiooxidans [LWSD]
15853
15926
+
Gly
CCC
[ENA]
¡û
>W1711293179
LZYI01000116
Acidithiobacillia
Acidithiobacillus thiooxidans [LZYI]
7918
7845
-
Gly
CCC
[ENA]
¡û
>W141206802
AZMO01000080
Acidithiobacillia
Acidithiobacillus thiooxidans A01 [AZMO]
7829
7756
-
Gly
CCC
[ENA]
¡û
>W1710743655
LGYM01000007
Acidithiobacillia
Acidithiobacillus thiooxidans [LGYM]
22577
22650
+
Gly
CCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK