tRNA genes clustered and arranged according to each identical group

Acidithiobacillia

Anticodon = GTA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.181024 (27 seq.)
>W1710777623 LJBT01000002 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 42275 42191 - Tyr GTA [ENA] ¡û
>W1711010490 LQRJ01000069 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 48548 48464 - Tyr GTA [ENA] ¡û
>W1711168333 LVXZ01000041 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 5854 5938 + Tyr GTA [ENA] ¡û
>W1711220218 LXQG01000189 Acidithiobacillia Acidithiobacillus caldus [LXQG] 25585 25669 + Tyr GTA [ENA] ¡û
>W1711292978 LZYE01000255 Acidithiobacillia Acidithiobacillus caldus [LZYE] 14228 14312 + Tyr GTA [ENA] ¡û
>W1711292996 LZYF01000026 Acidithiobacillia Acidithiobacillus caldus [LZYF] 18513 18429 - Tyr GTA [ENA] ¡û
>W1711293038 LZYG01000022 Acidithiobacillia Acidithiobacillus caldus [LZYG] 46 130 + Tyr GTA [ENA] ¡û
>W1711293100 LZYH01000631 Acidithiobacillia Acidithiobacillus caldus [LZYH] 1373 1457 + Tyr GTA [ENA] ¡û
>W131231791 AUIS01000034 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 18514 18598 + Tyr GTA [ENA] ¡û
>WENV181406422 OGCG01000244 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 391 307 - Tyr GTA [ENA] ¢þ
>C08000393 CP001132 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 53993 [CP001132] 453541 453625 + Tyr GTA [Ensembl] ¡û
>W09134886 ACVD01000014 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [ACVD] 712 628 - Tyr GTA [ENA] ¡û
>C181130795 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 517754 517838 + Tyr GTA - ¡û
>C191005128 AP018795 Acidithiobacillia Acidithiobacillus ferridurans JCM 18981 [AP018795] 1077744 1077660 - Tyr GTA - ¡û
>C09100346 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 275027 275111 + Tyr GTA [Ensembl] ¡û
>W1810257142 PQJK01000011 Acidithiobacillia Acidithiobacillus ferridurans IO-2C [PQJK] 25254 25338 + Tyr GTA [ENA] ¡û
>W1810679269 QKQP01000001 Acidithiobacillia Acidithiobacillus ferrooxidans CCM 4253 [QKQP] 1293136 1293052 - Tyr GTA [ENA] ¡û
>C151007936 CP005986 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [CP005986] 605080 605164 + Tyr GTA [Ensembl] ¡û
>W10127992 AEFB01001065 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 2475 2559 + Tyr GTA [ENA] ¡û
>C11100479 CP002573 Acidithiobacillia Acidithiobacillus caldus SM-1 [CP002573] 597295 597379 + Tyr GTA [Ensembl] ¡û
>W11135537 AEFB01001065 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 2475 2559 + Tyr GTA [ENA] ¡û
>W1610627917 LIEB01000044 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 187725 187809 + Tyr GTA [ENA] ¡û
>W1610641809 LJBT01000002 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 42275 42191 - Tyr GTA [ENA] ¡û
>W1610859010 LQRJ01000069 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 48548 48464 - Tyr GTA [ENA] ¡û
>W1610978248 LVXZ01000041 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 5854 5938 + Tyr GTA [ENA] ¡û
>W1611004690 LXQG01000189 Acidithiobacillia Acidithiobacillus caldus [LXQG] 25585 25669 + Tyr GTA [ENA] ¡û
>W1710759044 LIEB01000044 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 187725 187809 + Tyr GTA [ENA] ¡û
Identical group No.187517 (9 seq.)
>W1711169854 LVZL01000001 Acidithiobacillia Acidithiobacillus ferrivorans [LVZL] 58183 58099 - Tyr GTA [ENA] ¡û
>W1711312144 MASQ01000020 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 4115 4199 + Tyr GTA [ENA] ¡û
>W141262934 CCCS020000037 Acidithiobacillia Acidithiobacillus ferrivorans [CCCS] 39758 39674 - Tyr GTA [ENA] ¡û
>WENV170008370 AOMP01000795 [AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 1570 1654 + Tyr GTA [ENA] ¢þ
>WENV170008537 AOMQ01002396 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 1153 1237 + Tyr GTA [ENA] ¢þ
>WENV170008539 AOMQ01002414 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 129 45 - Tyr GTA [ENA] ¢þ
>C11100733 CP002985 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [CP002985] 2702805 2702721 - Tyr GTA [Ensembl] ¡û
>W11164260 AFJD01000003 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [AFJD] 224066 224150 + Tyr GTA [ENA] ¡û
>W1611057345 MASQ01000020 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 4115 4199 + Tyr GTA [ENA] ¡û
Identical group No.197394 (8 seq.)
>W1710799180 LJUK01000073 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 13907 13991 + Tyr GTA [ENA] ¡û
>W1710799770 LJVB01000099 Acidithiobacillia Acidithiobacillales bacterium SM1_46 [LJVB] 511 427 - Tyr GTA [ENA] ¡û
>WENV180254441 OBEQ010630353 [OBEQ] groundwater metagenome; groundwater 372 288 - Tyr GTA [ENA] ¢þ
>WENV180350782 OBLQ010010801 [OBLQ] soil metagenome; soil 3021 3105 + Tyr GTA [ENA] ¢þ
>WENV181288191 OFGY01023659 [OFGY] soil metagenome; Clay 640 556 - Tyr GTA [ENA] ¢þ
>C181000790 AP014879 Gammaproteobacteria Sulfuricaulis limicola HA5 [AP014879] 2358896 2358812 - Tyr GTA - ¡û
>W1610663137 LJUK01000073 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 13907 13991 + Tyr GTA [ENA] ¡û
>W1610663727 LJVB01000099 Acidithiobacillia Acidithiobacillales bacterium SM1_46 [LJVB] 511 427 - Tyr GTA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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