tRNA genes clustered and arranged according to each identical group

Acidobacteria

Anticodon = GAT

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.281053 (54 seq.)
>W1711502606 MKSV01000010 Acidobacteriota Acidobacteriales bacterium 59-55 [MKSV] 200620 200696 + Ile GAT [ENA] ¡û
>W131179148 ARMD01000022 Acidobacteriota Acidobacteriaceae bacterium KBS 83 [ARMD] 435128 435052 - Ile GAT [ENA] ¡û
>W131179175 ARME01000006 Acidobacteriota Acidobacteriaceae bacterium KBS 89 [ARME] 314662 314586 - Ile GAT [ENA] ¡û
>W131179259 ARMF01000009 Acidobacteriota Bryobacterales bacterium KBS 96 KBS 96 [ARMF] 868574 868650 + Ile GAT [ENA] ¡û
>W131216813 ATWD01000001 Acidobacteriota Acidobacteriaceae bacterium TAA 166 TAA166 [ATWD] 1167383 1167307 - Ile GAT [ENA] ¡û
>WENV180289475 OBIS01062711 [OBIS] soil metagenome; Alaskan Permafrost 84 160 + Ile GAT [ENA] ¢þ
>WENV180294417 OBIY01130339 [OBIY] beach sand metagenome; beach sand 133 57 - Ile GAT [ENA] ¢þ
>WENV180343367 OBLK01008187 [OBLK] soil metagenome; Clay 441 365 - Ile GAT [ENA] ¢þ
>WENV180356035 OBNJ01019949 [OBNJ] sediment metagenome; sediment 186 110 - Ile GAT [ENA] ¢þ
>WENV180692270 OCZS010435865 [OCZS] soil metagenome; soil 222 146 - Ile GAT [ENA] ¢þ
>WENV181162774 OEIO01013201 [OEIO] marine metagenome; sea ice 681 605 - Ile GAT [ENA] ¢þ
>WENV181191327 OEPS010058787 [OEPS] soil metagenome; soil 792 716 - Ile GAT [ENA] ¢þ
>WENV181291696 OFHC01002681 [OFHC] soil metagenome; Clay 277 353 + Ile GAT [ENA] ¢þ
>WENV181292429 OFHE01010408 [OFHE] soil metagenome; Clay 280 356 + Ile GAT [ENA] ¢þ
>WENV181295325 OFHI01020374 [OFHI] soil metagenome; Clay 734 658 - Ile GAT [ENA] ¢þ
>WENV181295903 OFHJ01001773 [OFHJ] soil metagenome; Clay 3091 3015 - Ile GAT [ENA] ¢þ
>WENV181321577 OFKM01017494 [OFKM] marine metagenome; sea ice 11 87 + Ile GAT [ENA] ¢þ
>W141148493 AWXZ01000027 Alphaproteobacteria Lutibaculum baratangense AMV1 [AWXZ] 3589 3513 - Ile GAT [ENA] ¡û
>WENV183630971 OOGU01013632 [OOGU] marine metagenome; sea ice 1152 1076 - Ile GAT [ENA] ¢þ
>WENV183697754 OUNK010062854 [OUNK] metagenome; soil 748 672 - Ile GAT [ENA] ¢þ
>WENV170008609 AOMQ01006510 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 531 607 + Ile GAT [ENA] ¢þ
>WENV170130547 CENR01009611 [CENR] marine metagenome genome assembly TARA_018_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1488 1412 - Ile GAT [ENA] ¢þ
>WENV170152028 CEOE01021551 [CEOE] marine metagenome genome assembly TARA_025_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2409 2333 - Ile GAT [ENA] ¢þ
>WENV170234267 CEQK01031805 [CEQK] marine metagenome genome assembly TARA_076_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 450 526 + Ile GAT [ENA] ¢þ
>WENV170267270 CERF01038547 [CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 642 566 - Ile GAT [ENA] ¢þ
>WENV170269102 CERH01042268 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 147 223 + Ile GAT [ENA] ¢þ
>WENV170366414 CETO01064522 [CETO] marine metagenome genome assembly TARA_122_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 217 293 + Ile GAT [ENA] ¢þ
>WENV170576167 FPLS01059454 [FPLS] metagenome; unknown 82 6 - Ile GAT [ENA] ¢þ
>C181193329 CP030840 Acidobacteriota Acidisarcina polymorpha SBC82 [CP030840] 1124114 1124038 - Ile GAT - ¡û
>W141557288 JHVA01000001 Acidobacteriota Acidobacteriaceae bacterium KBS 146 KBS 146 [JHVA] 4069690 4069766 + Ile GAT [ENA] ¡û
>W141564067 JIAL01000001 Acidobacteriota Pseudacidobacterium ailaaui PMMR2 [JIAL] 772441 772365 - Ile GAT [ENA] ¡û
>W141564289 JIAQ01000013 Acidobacteriota Acidobacteriaceae bacterium URHE0068 [JIAQ] 141886 141810 - Ile GAT [ENA] ¡û
>W141817021 JQKI01000003 Acidobacteriota Edaphobacter aggregans DSM 19364 [JQKI] 4305 4229 - Ile GAT [ENA] ¡û
>C09100216 CP001472 Acidobacteriota Acidobacterium capsulatum ATCC 51196 [CP001472] 2865104 2865180 + Ile GAT [Ensembl] ¡û
>W1910548833 FZOU01000006 Acidobacteriota Granulicella rosea DSM 18704 [FZOU] 241046 240970 - Ile GAT [ENA] ¡û
>W1910548835 FZOU01000006 Acidobacteriota Granulicella rosea DSM 18704 [FZOU] 223288 223212 - Ile GAT [ENA] ¡û
>W1911748651 QWEV01000005 Acidobacteriota Acidipila sp. EB88 [QWEV] 1581544 1581468 - Ile GAT [ENA] ¡û
>W1911748659 QWEV01000005 Acidobacteriota Acidipila sp. EB88 [QWEV] 955785 955709 - Ile GAT [ENA] ¡û
>W1810915036 QVQT01000003 Acidobacteriota Paracidobacterium acidisoli 4G-K13 [QVQT] 436434 436510 + Ile GAT [ENA] ¡û
>SRA1013918 SRR023820.32840 Pru Toh Daeng peat swamp (SRP001114) 123 199 + Ile GAT [SRA]
>W10119530 ADVY01000015 Acidobacteria Acidobacterium sp. MP5ACTX9 [ADVY] MP5ACTX9 [ADVY] 84999 84923 - Ile GAT [ENA] ¡û
>C11100547 CP002480 Acidobacteriota Granulicella tundricola MP5ACTX9 [CP002480] 3730404 3730328 - Ile GAT [Ensembl] ¡û
>W11125796 ADVY01000015 Acidobacteria Acidobacterium sp. MP5ACTX9 [ADVY] MP5ACTX9 [ADVY] 84999 84923 - Ile GAT [ENA] ¡û
>W1511591116 LBHJ01000004 Acidobacteriota Silvibacterium bohemicum S15 [LBHJ] 886097 886021 - Ile GAT [ENA] ¡û
>C121011796 CP003379 Acidobacteriota Terriglobus roseus DSM 18391 [CP003379] 926150 926226 + Ile GAT [Ensembl] ¡û
>C121011801 CP003379 Acidobacteriota Terriglobus roseus DSM 18391 [CP003379] 2076252 2076328 + Ile GAT [Ensembl] ¡û
>W1610576094 LAIJ01000009 Acidobacteriota Terracidiphilus gabretensis [LAIJ] 2035335 2035411 + Ile GAT [ENA] ¡û
>ENV001127 AY534293 Environmental sample from ENV division of INSDC 188 264 + Ile GAT [ENA]
>W1710534866 FNSD01000001 Acidobacteriota Terriglobus roseus [FNSD] 2832852 2832928 + Ile GAT [ENA] ¡û
>W1710534891 FNSD01000001 Acidobacteriota Terriglobus roseus [FNSD] 1637912 1637836 - Ile GAT [ENA] ¡û
>W1710575754 FOZL01000001 Acidobacteriota Granulicella pectinivorans [FOZL] 4436732 4436656 - Ile GAT [ENA] ¡û
>W1710601618 FUXL01000010 Alphaproteobacteria Consotaella salsifontis USBA 369 [FUXL] 2422 2346 - Ile GAT [ENA] ¡û
>W1710601627 FUXL01000019 Alphaproteobacteria Consotaella salsifontis USBA 369 [FUXL] 92659 92735 + Ile GAT [ENA] ¡û
>W1710694358 LAIJ01000009 Acidobacteriota Terracidiphilus gabretensis [LAIJ] 2035335 2035411 + Ile GAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK