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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Acidobacteriota
Anticodon = GCC
HIT:
8 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.239419 (1 seq.)
>W1711575886
MNJR01000027
Acidobacteriota
Acidobacteria bacterium 13_1_20CM_3_53_8 [MNJR]
133931
134009
+
Gly
GCC
[ENA]
¡û
Identical group No.414704 (1 seq.)
>W1910697278
MEKM01000066
Acidobacteriota
Acidobacteria bacterium RIFCSPHIGHO2_01_FULL_67_28 [MEKM]
14936
14860
-
Gly
GCC
[ENA]
¡û
Identical group No.554508 (1 seq.)
>W131179227
ARMF01000006
Acidobacteriota
Bryobacterales bacterium KBS 96 KBS 96 [ARMF]
1165631
1165706
+
Gly
GCC
[ENA]
¡û
Identical group No.554512 (1 seq.)
>W131179253
ARMF01000008
Acidobacteriota
Bryobacterales bacterium KBS 96 KBS 96 [ARMF]
813883
813808
-
Gly
GCC
[ENA]
¡û
Identical group No.696621 (1 seq.)
>W1910697618
MEKX01000007
Acidobacteriota
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10 [MEKX]
11945
11871
-
Gly
GCC
[ENA]
¡û
Identical group No.726400 (1 seq.)
>W1910697657
MEKY01000046
Acidobacteriota
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11 [MEKY]
2739
2665
-
Gly
GCC
[ENA]
¡û
Identical group No.772459 (1 seq.)
>W141564032
JIAL01000001
Acidobacteriota
Pseudacidobacterium ailaaui PMMR2 [JIAL]
1187886
1187960
+
Gly
GCC
[ENA]
¡û
Identical group No.812420 (1 seq.)
>W1910697664
MEKY01000049
Acidobacteriota
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11 [MEKY]
957
1030
+
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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