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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Actinobacteria
Anticodon = TTG
HIT:
2 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.659879 (34 seq.)
>W1710872186
LMLU01000005
Actinomycetota
Arthrobacter sp. Leaf234 [LMLU]
489426
489498
+
Gln
TTG
[ENA]
¡û
>W1711603227
MOLR01000008
Actinomycetota
Arthrobacter sp. UCD-GKA [MOLR]
120825
120897
+
Gln
TTG
[ENA]
¡û
>W1712049553
NFSD01000034
Actinomycetota
Arthrobacter agilis [NFSD]
241185
241113
-
Gln
TTG
[ENA]
¡û
>W131087257
AOCK01000003
Actinomycetota
Paeniglutamicibacter gangotriensis Lz1y [AOCK]
290484
290412
-
Gln
TTG
[ENA]
¡û
>W131236636
AUMN01000006
Actinomycetota
Arthrobacter castelli DSM 16402 [AUMN]
173386
173458
+
Gln
TTG
[ENA]
¡û
>W141075198
ASZW01000287
Actinomycetota
Arthrobacter sp. CAL618 [ASZW]
32048
31976
-
Gln
TTG
[ENA]
¡û
>W141213402
AZRY01000139
Actinomycetota
Arthrobacter sp. H20 [AZRY]
50804
50732
-
Gln
TTG
[ENA]
¡û
>W141213448
AZRZ01000360
Actinomycetota
Arthrobacter sp. H41 [AZRZ]
3491
3563
+
Gln
TTG
[ENA]
¡û
>W141213502
AZSA01000260
Actinomycetota
Arthrobacter sp. Br18 [AZSA]
2479
2407
-
Gln
TTG
[ENA]
¡û
>W141213594
AZSC01000267
Actinomycetota
Arthrobacter sp. H5 [AZSC]
24044
23972
-
Gln
TTG
[ENA]
¡û
>C191193410
LR131272
Actinomycetota
Arthrobacter agilis NCTC2676_1 [LR131272]
862172
862244
+
Gln
TTG
-
¡û
>W1910373992
FUHW01000044
Actinomycetota
Arthrobacter rhombi B Ar 00.02 [FUHW]
166561
166634
+
Gln
TTG
[ENA]
¡û
>W1910841604
NADW01000016
Bacillota
Bacillus sp. SRB_336 [NADW]
166028
166101
+
Gln
TTG
[ENA]
¡û
>W1911203432
NRGU01000030
Actinomycetota
Glutamicibacter sp. BW78 [NRGU]
57186
57113
-
Gln
TTG
[ENA]
¡û
>W1911567687
PCPT01000007
Actinomycetota
Arthrobacter sp. MYb227 [PCPT]
108271
108343
+
Gln
TTG
[ENA]
¡û
>W1911823656
QZVT01000003
Actinomycetota
Arthrobacter cheniae Hz2 [QZVT]
289012
288940
-
Gln
TTG
[ENA]
¡û
>W1810167463
PJIM01000003
Actinomycetota
Arthrobacter sp. SX1312 [PJIM]
182822
182750
-
Gln
TTG
[ENA]
¡û
>W1810167637
PJIQ01000007
Actinomycetota
Arthrobacter sp. B1805 [PJIQ]
118858
118786
-
Gln
TTG
[ENA]
¡û
>W1810167673
PJIR01000003
Actinomycetota
Arthrobacter sp. B0490 [PJIR]
275047
274975
-
Gln
TTG
[ENA]
¡û
>W1810242481
PPXB01000002
Actinomycetota
Arthrobacter glacialis TMN-18 [PPXB]
303992
303918
-
Gln
TTG
[ENA]
¡û
>W1810242533
PPXC01000002
Actinomycetota
Arthrobacter glacialis HLT2-12-2 [PPXC]
181202
181276
+
Gln
TTG
[ENA]
¡û
>W1810271448
PRKX01000029
Actinomycetota
Arthrobacter agilis CGMCC 1.15723 [PRKX]
251738
251666
-
Gln
TTG
[ENA]
¡û
>W1810534635
QDAE01000017
Actinomycetota
Arthrobacter sp. Bz4 [QDAE]
47216
47288
+
Gln
TTG
[ENA]
¡û
>W1810673930
QJVC01000024
Actinomycetota
Arthrobacter psychrolactophilus B7 [QJVC]
41169
41097
-
Gln
TTG
[ENA]
¡û
>W1810673951
QJVD01000005
Actinomycetota
Arthrobacter livingstonensis LI2 [QJVD]
48332
48260
-
Gln
TTG
[ENA]
¡û
>W1810674021
QJVE01000016
Actinomycetota
Arthrobacter stackebrandtii CCM 2783 [QJVE]
47282
47208
-
Gln
TTG
[ENA]
¡û
>W1810707084
QMKQ01000002
Actinomycetota
Arthrobacter sp. AQ5-05 [QMKQ]
276141
276069
-
Gln
TTG
[ENA]
¡û
>C151097164
CP012677
Actinomycetota
Arthrobacter alpinus R3.8 [CP012677]
626118
626190
+
Gln
TTG
-
¡û
>W1511343677
JREV01000037
Actinobacteria
Arthrobacter sp. A3 [JREV] A3 [JREV]
51076
51002
-
Gln
TTG
[ENA]
¡û
>W1511489282
JWSU01000008
Actinomycetota
Arthrobacter sp. L77 [JWSU]
46060
46132
+
Gln
TTG
[ENA]
¡û
>C161060664
CP013745
Actinomycetota
Arthrobacter alpinus A3 [CP013745]
558634
558708
+
Gln
TTG
[Ensembl]
¡û
>W121114209
ALPM01000075
Actinomycetota
Arthrobacter sp. TB 23 [ALPM]
43756
43684
-
Gln
TTG
[ENA]
¡û
>W1610734532
LMLU01000005
Actinomycetota
Arthrobacter sp. Leaf234 [LMLU]
489426
489498
+
Gln
TTG
[ENA]
¡û
>W1710537485
FNTV01000001
Actinomycetota
Arthrobacter alpinus [FNTV]
2194859
2194785
-
Gln
TTG
[ENA]
¡û
Identical group No.752995 (4 seq.)
>W10114046
ADGT01000029
Actinobacteria
Frankia symbiont of Datisca glomerata [ADGT] of Datisca glomerata [ADGT]
22626
22552
-
Gln
TTG
[ENA]
¡û
>C11109359
CP002801
Actinomycetota
Candidatus Protofrankia datiscae Dg1 [CP002801]
869999
870073
+
Gln
TTG
[Ensembl]
¡û
>W11117382
ADGT01000029
Actinobacteria
Frankia symbiont of Datisca glomerata [ADGT] of Datisca glomerata [ADGT]
22626
22552
-
Gln
TTG
[ENA]
¡û
>W1511479803
JWIO01000001
Actinomycetota
Protofrankia coriariae BMG5.1 [JWIO]
231445
231371
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK