Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = GGA

HIT: 5 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.31923 (1 seq.)
	>PL171001245	CP016463	Alphaproteobacteria	Bosea sp. RAC05 plasmid:pBSY19_1	471341	471430	+	Ser	GGA	[ENA]	○
Identical group No.38521 (16 seq.)
	>W1710852986	LLWF02000006	Alphaproteobacteria	Roseomonas mucosa [LLWF]	84641	84551	-	Ser	GGA	[ENA]	○
	>C171039547	CP015583	Alphaproteobacteria	Roseomonas gilardii U14-5 [CP015583, CP015584]	2211436	2211526	+	Ser	GGA	-	○
	>W141276619	JADY01000002	Alphaproteobacteria	Roseomonas gilardii subsp. rosea ATCC BAA-691 [JADY]	29032	29122	+	Ser	GGA	[ENA]	○
	>C181102060	CP024588	Alphaproteobacteria	Roseomonas sp. FDAARGOS_362 [CP024588]	566101	566011	-	Ser	GGA	-	○
	>W141558697	JHWD01000002	Alphaproteobacteria	Roseomonas mucosa ATCC BAA-692 [JHWD]	19467	19557	+	Ser	GGA	[ENA]	○
	>PL201000238	CP015583	Alphaproteobacteria	Roseomonas gilardii U14-5 plasmid: [CP015583]	2211436	2211526	+	Ser	GGA	[ENA]	○
	>W2011522024	SACL01000001	Alphaproteobacteria	Rhodovarius sp. CCP-6 [SACL]	163612	163522	-	Ser	GGA	[ENA]	○
	>W2011838993	UGVN01000001	Alphaproteobacteria	Roseomonas mucosa NCTC13291 [UGVN]	3792072	3792162	+	Ser	GGA	[ENA]	○
	>W2011839077	UGVO01000001	Alphaproteobacteria	Roseomonas gilardii subsp. rosea NCTC13290 [UGVO]	1635831	1635741	-	Ser	GGA	[ENA]	○
	>C231032830	CP025061	Alphaproteobacteria	Roseomonas mucosa PG [CP025061]	2911094	2911184	+	Ser	GGA	-	○
	>C231361857	CP095554	Alphaproteobacteria	Roseomonas gilardii subsp. gilardii ATCC 49956 [CP095554]	3119338	3119428	+	Ser	GGA	-	○
	>C231412897	CP099471	Alphaproteobacteria	Roseomonas mucosa TT14 [CP099471]	111901	111991	+	Ser	GGA	-	○
	>C241086898	CP044117	Alphaproteobacteria	Roseomonas mucosa FDAARGOS_658 [CP044114, CP044115, CP044116, CP044117]	1836650	1836740	+	Ser	GGA	-	○
	>W121113836	ALOX01000011	Alphaproteobacteria	Roseomonas sp. B5 [ALOX]	168733	168643	-	Ser	GGA	[ENA]	○
	>W1610716129	LLWF01000079	Alphaproteobacteria	Roseomonas mucosa [LLWF]	2386	2476	+	Ser	GGA	[ENA]	○
	>W1710084260	BDLP01000012	Alphaproteobacteria	Roseomonas sp. TAS13 [BDLP]	8984	9074	+	Ser	GGA	[ENA]	○
Identical group No.53027 (105 seq.)
	>W1711294767	MABH01000137	Alphaproteobacteria	Cereibacter johrii [MABH]	22706	22795	+	Ser	GGA	[ENA]	○
	>W1711385819	MEES01000002	Alphaproteobacteria	Paracoccus sp. SCN 68-21 [MEES]	708	619	-	Ser	GGA	[ENA]	○
	>W131058661	ANFS01000044	Alphaproteobacteria	Rhodobacter sp. AKP1 [ANFS]	88210	88121	-	Ser	GGA	[ENA]	○
	>W131155852	AQOX01000003	Alphaproteobacteria	Limimaricola hongkongensis DSM 17492 [AQOX]	364150	364239	+	Ser	GGA	[ENA]	○
	>W131216070	ATVN01000009	Alphaproteobacteria	Pseudorhodobacter ferrugineus DSM 5888 [ATVN]	149301	149390	+	Ser	GGA	[ENA]	○
	>C171037005	CP015210	Alphaproteobacteria	Cereibacter sphaeroides MBTLJ-13 [CP015210, CP015211]	1942458	1942369	-	Ser	GGA	-	○
	>C019230	CP000143	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [CP000143, CP000144]	1942528	1942439	-	Ser	GGA	[Ensembl]	○
	>C019277	CP000661	Alphaproteobacteria	Cereibacter sphaeroides [CP000661]	1850753	1850842	+	Ser	GGA	[Ensembl]	○
	>C019320	CP000577	Alphaproteobacteria	Cereibacter sphaeroides ATCC 17029 [CP000577, CP000578]	1974842	1974753	-	Ser	GGA	[Ensembl]	○
	>WENV180231738	OBCO01000001	[OBCO] synthetic metagenome; purchased from BEI Resources HM-276D		263595	263506	-	Ser	GGA	[ENA]	○
	>WENV180232712	OBCP01000001	[OBCP] synthetic metagenome; purchased from BEI Resources HM-276D		505711	505622	-	Ser	GGA	[ENA]	○
	>w001254	AAAE01000130	Alphaproteobacteria	Cereibacter sphaeroides [AAAE]	5627	5536	-	Ser	GGA	[ENA]	○
	>WENV180569513	OCLR01000122	[OCLR] synthetic metagenome; purchased from BEI Resources HM-276D		98341	98252	-	Ser	GGA	[ENA]	○
	>WENV180570444	OCLS01000119	[OCLS] synthetic metagenome; purchased from BEI Resources HM-276D		123087	122998	-	Ser	GGA	[ENA]	○
	>WENV180571095	OCLT01000002	[OCLT] synthetic metagenome; purchased from BEI Resources HM-276D		263484	263395	-	Ser	GGA	[ENA]	○
	>WENV180573357	OCLW01000006	[OCLW] synthetic metagenome; purchased from BEI Resources HM-276D		233735	233824	+	Ser	GGA	[ENA]	○
	>WENV180639421	OCRL01000002	[OCRL] synthetic metagenome; purchased from BEI Resources HM-276D		263484	263395	-	Ser	GGA	[ENA]	○
	>WENV180640324	OCRM01000001	[OCRM] synthetic metagenome; purchased from BEI Resources HM-276D		505711	505622	-	Ser	GGA	[ENA]	○
	>W141063313	APGJ01000004	Alphaproteobacteria	Limimaricola hongkongensis DSM 17492 [APGJ]	365031	365120	+	Ser	GGA	[ENA]	○
	>W141230432	BATB01000015	Alphaproteobacteria	Limimaricola cinnabarinus LL-001 [BATB]	18255	18344	+	Ser	GGA	[ENA]	○
	>WENV170014614	AYSL01000884	[AYSL] marine sediment metagenome; marine sediment samples in the proximity of a phosphate-oil terminal		273	362	+	Ser	GGA	[ENA]	○
	>PL191001397	CP039965	Alphaproteobacteria	Pseudorhodobacter sp. S12M18 plasmid:unnamed1 (CP039965)	1249356	1249445	+	Ser	GGA	[ENA]	○
	>C181017236	CP015287	Alphaproteobacteria	Cereibacter sphaeroides MBTLJ-20 [CP015287, CP015288]	1942445	1942356	-	Ser	GGA	-	○
	>C181191121	CP030271	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [CP030271, CP030272]	1942465	1942376	-	Ser	GGA	-	○
	>C181194171	CP030918	Alphaproteobacteria	Paracoccus suum SC2-6 [CP030918]	2281676	2281765	+	Ser	GGA	-	○
	>C191079654	CP031750	Alphaproteobacteria	Cereibacter sphaeroides EBL0706 [CP031750, CP031751]	1607747	1607836	+	Ser	GGA	-	○
	>W09104750	AAME01000075	Alphaproteobacteria	Cereibacter sphaeroides ATCC 17025 [AAME]	1407	1318	-	Ser	GGA	[ENA]	○
	>W09104770	AAMF01000002	Alphaproteobacteria	Cereibacter sphaeroides ATCC 17029 [AAMF]	706961	707050	+	Ser	GGA	[ENA]	○
	>C191151000	CP036419	Alphaproteobacteria	Cereibacter sphaeroides HJ [CP036419, CP036420]	1026717	1026806	+	Ser	GGA	-	○
	>C191159590	CP038439	Alphaproteobacteria	Paracoccus liaowanqingii 2251 [CP038439]	2316443	2316354	-	Ser	GGA	-	○
	>W1910548876	FZOV01000005	Alphaproteobacteria	Rhodobacter megalophilus DSM 18937 [FZOV]	233813	233902	+	Ser	GGA	[ENA]	○
	>W1910549888	FZQB01000015	Alphaproteobacteria	Paracoccus seriniphilus DSM 14827 [FZQB]	315	226	-	Ser	GGA	[ENA]	○
	>C09109068	CP001150	Alphaproteobacteria	Cereibacter sphaeroides KD131 KD131; KCTC 12085 [CP001150, CP001151]	1574401	1574312	-	Ser	GGA	[Ensembl]	○
	>W1911189707	NQWH01000010	Alphaproteobacteria	Limimaricola cinnabarinus XM1 [NQWH]	122832	122743	-	Ser	GGA	[ENA]	○
	>W1911491944	OAOQ01000026	Alphaproteobacteria	Rhodobacter ovatus JA234 [OAOQ]	731	820	+	Ser	GGA	[ENA]	○
	>W1911698522	QNRC01000057	Alphaproteobacteria	Paracoccus siganidrum M26 [QNRC]	472	383	-	Ser	GGA	[ENA]	○
	>W1911705518	QOKZ01000005	Alphaproteobacteria	Paracoccus sp. 4-2 [QOKZ]	312886	312797	-	Ser	GGA	[ENA]	○
	>W1911718105	QQVY01000005	Alphaproteobacteria	Paracoccus sp. JM45 [QQVY]	182024	182113	+	Ser	GGA	[ENA]	○
	>W1911749446	QWGP01000007	Alphaproteobacteria	Rhodobacter sphaeroides FY [QWGP]	2570	2481	-	Ser	GGA	[ENA]	○
	>W1911766283	QXDK01000014	Alphaproteobacteria	Rhodobacter sphaeroides SCJ [QXDK]	88732	88643	-	Ser	GGA	[ENA]	○
	>W1911810983	QZCG01000016	Alphaproteobacteria	Paracoccus sp. 1011MAR3C25 [QZCG]	49850	49761	-	Ser	GGA	[ENA]	○
	>W1911813198	QZEV01000039	Alphaproteobacteria	Paracoccus aestuarii DSM 19484 [QZEV]	13365	13454	+	Ser	GGA	[ENA]	○
	>W1911813229	QZEW01000002	Alphaproteobacteria	Paracoccus siganidrum DSM 26381 [QZEW]	62182	62093	-	Ser	GGA	[ENA]	○
	>W1810116257	PHOB01000015	Alphaproteobacteria	Cereibacter sphaeroides YL101 [PHOB]	14665	14576	-	Ser	GGA	[ENA]	○
	>W1810119966	PHSI01000099	Alphaproteobacteria	Cereibacter azotoformans YLK20 [PHSI]	1581	1492	-	Ser	GGA	[ENA]	○
	>W1810385269	PXNQ01000008	Alphaproteobacteria	Paracoccus methylarcula VKM B-2159 [PXNQ]	141210	141299	+	Ser	GGA	[ENA]	○
	>W1810426271	PYWA01000007	Alphaproteobacteria	Paracoccus indicus IO390502 [PYWA]	117944	117855	-	Ser	GGA	[ENA]	○
	>W1810445048	PZKG01000115	Alphaproteobacteria	Cereibacter changlensis JA139 [PZKG]	7874	7963	+	Ser	GGA	[ENA]	○
	>W1810463821	PZZW01000002	Alphaproteobacteria	Cereibacter johrii JA192 [PZZW]	584274	584185	-	Ser	GGA	[ENA]	○
	>W1810543605	QDKM01000007	Alphaproteobacteria	Pararhodobacter oceanensis AM505 [QDKM]	3401	3312	-	Ser	GGA	[ENA]	○
	>W1810667430	QJPK01000010	Alphaproteobacteria	Paracoccus sediminilitoris DSL-16 [QJPK]	133352	133441	+	Ser	GGA	[ENA]	○
	>W1810684480	QKYL01000045	Alphaproteobacteria	Paracoccus saliphilus CCTCC AB 2016131 [QKYL]	46002	46091	+	Ser	GGA	[ENA]	○
	>W1810686012	QKZS01000019	Alphaproteobacteria	Cereibacter changlensis DSM 18774 [QKZS]	5424	5335	-	Ser	GGA	[ENA]	○
	>W1810699115	QMCC01000008	Alphaproteobacteria	Cereibacter johrii CDR-SL 7Cii [QMCC]	677278	677189	-	Ser	GGA	[ENA]	○
	>W1810785195	QRBG01000025	Alphaproteobacteria	Cereibacter sphaeroides f. sp. denitrificans IL106 [QRBG]	511257	511168	-	Ser	GGA	[ENA]	○
	>W2010103224	BJXO01000001	Alphaproteobacteria	Rhodobacter sphaeroides NBRC 12203 [BJXO]	215673	215584	-	Ser	GGA	[ENA]	○
	>W2010430637	FZOV01000005	Alphaproteobacteria	Rhodobacter megalophilus DSM 18937 [FZOV]	233813	233902	+	Ser	GGA	[ENA]	○
	>W2010431649	FZQB01000015	Alphaproteobacteria	Paracoccus seriniphilus DSM 14827 [FZQB]	315	226	-	Ser	GGA	[ENA]	○
	>W2011044992	NQWH01000010	Alphaproteobacteria	Limimaricola cinnabarinus XM1 [NQWH]	122832	122743	-	Ser	GGA	[ENA]	○
	>W2011152895	OAOQ01000026	Alphaproteobacteria	Rhodobacter ovatus JA234 [OAOQ]	731	820	+	Ser	GGA	[ENA]	○
	>W2011277305	QNRC01000057	Alphaproteobacteria	Paracoccus siganidrum M26 [QNRC]	472	383	-	Ser	GGA	[ENA]	○
	>W2011279942	QOKZ01000005	Alphaproteobacteria	Paracoccus sp. 4-2 [QOKZ]	312886	312797	-	Ser	GGA	[ENA]	○
	>W2011286150	QQVY01000005	Alphaproteobacteria	Paracoccus sp. JM45 [QQVY]	182024	182113	+	Ser	GGA	[ENA]	○
	>W2011318691	QWGP01000007	Alphaproteobacteria	Rhodobacter sphaeroides FY [QWGP]	2570	2481	-	Ser	GGA	[ENA]	○
	>W2011324726	QXDK01000014	Alphaproteobacteria	Rhodobacter sphaeroides SCJ [QXDK]	88732	88643	-	Ser	GGA	[ENA]	○
	>W2011345641	QZCG01000016	Alphaproteobacteria	Paracoccus sp. 1011MAR3C25 [QZCG]	49850	49761	-	Ser	GGA	[ENA]	○
	>W2011347468	QZEV01000039	Alphaproteobacteria	Paracoccus aestuarii DSM 19484 [QZEV]	13365	13454	+	Ser	GGA	[ENA]	○
	>W2011347499	QZEW01000002	Alphaproteobacteria	Paracoccus siganidrum DSM 26381 [QZEW]	62182	62093	-	Ser	GGA	[ENA]	○
	>W2011460658	RPEN01000144	Alphaproteobacteria	Pseudorhodobacter sp. E13 [RPEN]	25347	25258	-	Ser	GGA	[ENA]	○
	>W2011479316	RQRT01000006	Alphaproteobacteria	Paracoccus sp. I-41R45 [RQRT]	65214	65303	+	Ser	GGA	[ENA]	○
	>W2011680006	SRPG01000162	Alphaproteobacteria	Paracoccus sp. 3058 [SRPG]	3269	3358	+	Ser	GGA	[ENA]	○
	>W2011698021	SUNH01000018	Alphaproteobacteria	Paracoccus hibiscisoli CCTCC AB2016182 [SUNH]	78994	79083	+	Ser	GGA	[ENA]	○
	>W2011698067	SUNI01000009	Alphaproteobacteria	Paracoccus gahaiensis KCTC 42687 [SUNI]	6612	6523	-	Ser	GGA	[ENA]	○
	>W2011701444	SWAU01000251	Alphaproteobacteria	Cereibacter changlensis SBBC [SWAU]	1305	1216	-	Ser	GGA	[ENA]	○
	>W2011981099	VDEK01000141	Alphaproteobacteria	Rhodobacter sp. JA983 [VDEK]	298	209	-	Ser	GGA	[ENA]	○
	>W2012429112	WSNV01000001	Alphaproteobacteria	Rhodobacter sphaeroides strain 2.4.1 [WSNV]	1185052	1185141	+	Ser	GGA	[ENA]	○
	>W2012433874	WTFI01000030	Alphaproteobacteria	Rhodobacter sphaeroides SE1 [WTFI]	13482	13393	-	Ser	GGA	[ENA]	○
	>W2110414836	JAEIJD010000006	Alphaproteobacteria	Pontibaca salina S1109L [JAEIJD]	129431	129520	+	Ser	GGA	[ENA]	○
	>W2110438345	JAEPRQ010000001	Alphaproteobacteria	Paracoccus caeni MJ17 [JAEPRQ]	1090836	1090925	+	Ser	GGA	[ENA]	○
	>W2110536147	JAGFXX010000001	Alphaproteobacteria	Luteovulum azotoformans ka25 [JAGFXX]	682941	682852	-	Ser	GGA	[ENA]	○
	>W2110610779	JAHKNG010000015	Alphaproteobacteria	Paracoccus sp. XHP0099 [JAHKNG]	79760	79849	+	Ser	GGA	[ENA]	○
	>C231112464	CP067124	Alphaproteobacteria	Paracoccus alcaliphilus TK 1015 [CP067124]	2830249	2830338	+	Ser	GGA	-	○
	>C231112507	CP067129	Alphaproteobacteria	Paracoccus seriniphilus DSM 14827 [CP067129]	1417992	1418081	+	Ser	GGA	-	○
	>C231112607	CP067136	Alphaproteobacteria	Paracoccus fistulariae KCTC 22803 [CP067136]	3576618	3576707	+	Ser	GGA	-	○
	>C231112663	CP067140	Alphaproteobacteria	Paracoccus saliphilus DSM 18447 [CP067140]	3094105	3094016	-	Ser	GGA	-	○
	>C231112686	CP067169	Alphaproteobacteria	Paracoccus aestuarii DSM 19484 [CP067169]	1124749	1124838	+	Ser	GGA	-	○
	>C231267265	CP089965	Alphaproteobacteria	Cereibacter azotoformans ORIO [CP089965, CP089966]	1705538	1705627	+	Ser	GGA	-	○
	>C231268844	CP090021	Alphaproteobacteria	Cereibacter azotoformans SY5 [CP090021, CP090022]	1607543	1607632	+	Ser	GGA	-	○
	>C241115131	CP047031	Alphaproteobacteria	Cereibacter sphaeroides DSM 158 [CP047031, CP047032]	1943547	1943458	-	Ser	GGA	-	○
	>C241115182	CP047037	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [CP047037, CP047038]	1942217	1942128	-	Ser	GGA	-	○
	>C241150849	CP051468	Alphaproteobacteria	Cereibacter sphaeroides CH10 [CP051468, CP051469]	880082	880171	+	Ser	GGA	-	○
	>W1511698358	LGHS01000020	Alphaproteobacteria	Pseudorhodobacter aquimaris KCTC 23043 [LGHS]	58947	59036	+	Ser	GGA	[ENA]	○
	>W1511698414	LGHT01000032	Alphaproteobacteria	Pseudorhodobacter wandonensis KCTC 23672 [LGHT]	12482	12393	-	Ser	GGA	[ENA]	○
	>W1511698465	LGHU01000086	Alphaproteobacteria	Pseudorhodobacter antarcticus KCTC 23700 [LGHU]	25602	25691	+	Ser	GGA	[ENA]	○
	>W1511698488	LGHV01000020	Alphaproteobacteria	Pseudorhodobacter ferrugineus LMG 22047 [LGHV]	149701	149790	+	Ser	GGA	[ENA]	○
	>W11160188	AFER01000001	Alphaproteobacteria	Cereibacter sphaeroides WS8N [AFER]	1347068	1346979	-	Ser	GGA	[ENA]	○
	>C161048365	CP012960	Alphaproteobacteria	Cereibacter sphaeroides MBTLJ-8 [CP012960, CP012961]	1942454	1942365	-	Ser	GGA	-	○
	>W121076789	AKBU01000001	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [AKBU]	2964397	2964308	-	Ser	GGA	[ENA]	○
	>W121102136	AKVW01000001	Alphaproteobacteria	Cereibacter sphaeroides 2.4.1 [AKVW]	1942461	1942372	-	Ser	GGA	[ENA]	○
	>W1710540935	FNXG01000001	Alphaproteobacteria	Paracoccus alkenifer [FNXG]	131688	131599	-	Ser	GGA	[ENA]	○
	>W1710546972	FOCO01000040	Alphaproteobacteria	Pseudorhodobacter antarcticus [FOCO]	3077	2988	-	Ser	GGA	[ENA]	○
	>W1710547694	FODE01000020	Alphaproteobacteria	Paracoccus alcaliphilus [FODE]	58437	58526	+	Ser	GGA	[ENA]	○
	>W1710592381	FRCK01000005	Alphaproteobacteria	Paracoccus solventivorans [FRCK]	97199	97288	+	Ser	GGA	[ENA]	○
	>W1710599541	FTOU01000008	Alphaproteobacteria	Paracoccus saliphilus [FTOU]	102032	101943	-	Ser	GGA	[ENA]	○
	>W1710626830	JPKW01000005	Alphaproteobacteria	Paracoccus sp. SM22M-07 [JPKW]	81470	81381	-	Ser	GGA	[ENA]	○
Identical group No.53459 (96 seq.)
	>W1710853427	LLWQ01000217	Alphaproteobacteria	Paracoccus sp. MKU1 [LLWQ]	1855	1766	-	Ser	GGA	[ENA]	○
	>W1710889757	LNBC01000030	Alphaproteobacteria	Paracoccus aminovorans [LNBC]	123451	123540	+	Ser	GGA	[ENA]	○
	>W1712104736	NIPZ01000003	Alphaproteobacteria	Paracoccus yeei [NIPZ]	3404	3493	+	Ser	GGA	[ENA]	○
	>C171107693	CP020442	Alphaproteobacteria	Paracoccus yeei FDAARGOS_252 [CP020442]	675871	675782	-	Ser	GGA	-	○
	>C171110798	CP020612	Alphaproteobacteria	Paracoccus contaminans RKI 16-01929T [CP020612]	72716	72627	-	Ser	GGA	-	○
	>W131158919	AQUO01000001	Alphaproteobacteria	Paracoccus sp. N5 [AQUO]	637412	637323	-	Ser	GGA	[ENA]	○
	>C016012	CP000489	Alphaproteobacteria	Paracoccus denitrificans PD1222 [CP000489, CP000490]	948593	948682	+	Ser	GGA	[Ensembl]	○
	>W141216624	AZVA01000005	Alphaproteobacteria	Paracoccus sp. J55 [AZVA]	173424	173513	+	Ser	GGA	[ENA]	○
	>W141277320	JAEM01000043	Alphaproteobacteria	Paracoccus pantotrophus J46 [JAEM]	9893	9804	-	Ser	GGA	[ENA]	○
	>W141277354	JAEN01000009	Alphaproteobacteria	Paracoccus sp. J39 [JAEN]	39037	39126	+	Ser	GGA	[ENA]	○
	>W141279584	JAGK01000020	Alphaproteobacteria	Paracoccus pantotrophus J40 [JAGK]	24162	24073	-	Ser	GGA	[ENA]	○
	>WENV183729327	PJTQ01022258	[PJTQ] soil metagenome; Soil (3) enriched on wood chips		760	849	+	Ser	GGA	[ENA]	○
	>WENV170564883	CZPY01000030	[CZPY] metagenome; PAHs-polluted Soil		123451	123540	+	Ser	GGA	[ENA]	○
	>PL191000041	CP000489	Alphaproteobacteria	Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489)	948593	948682	+	Ser	GGA	[Ensembl]	○
	>C181099810	CP024422	Alphaproteobacteria	Paracoccus yeei TT13 [CP024422]	181238	181149	-	Ser	GGA	-	○
	>C181119687	CP025583	Alphaproteobacteria	Paracoccus jeotgali CBA4604 [CP025583]	1377143	1377054	-	Ser	GGA	-	○
	>C181190855	CP030239	Alphaproteobacteria	Paracoccus mutanolyticus RSP-02 [CP030239]	669323	669234	-	Ser	GGA	-	○
	>C181203413	LN832559	Alphaproteobacteria	Paracoccus aminovorans [LN832559]	2296258	2296169	-	Ser	GGA	-	○
	>C191073598	CP031078	Alphaproteobacteria	Paracoccus yeei CCUG 32053 [CP031078]	2184486	2184397	-	Ser	GGA	-	○
	>W09103073	AAIT01000027	Alphaproteobacteria	Paracoccus denitrificans PD1222 [AAIT]	22635	22546	-	Ser	GGA	[ENA]	○
	>C191134383	CP035090	Alphaproteobacteria	Paracoccus denitrificans ATCC 19367 [CP035090, CP035091]	2542992	2543081	+	Ser	GGA	-	○
	>W141558887	JHWH01000038	Alphaproteobacteria	Paracoccus yeei ATCC BAA-599 [JHWH]	15933	16022	+	Ser	GGA	[ENA]	○
	>W1911245319	NSJZ01000002	Alphaproteobacteria	Paracoccus sp. WN007 [NSJZ]	324211	324300	+	Ser	GGA	[ENA]	○
	>W1810236002	PPGA01000025	Alphaproteobacteria	Paracoccus denitrificans ISTOD1 [PPGA]	18036	18125	+	Ser	GGA	[ENA]	○
	>W1810585305	QFCQ01000008	Alphaproteobacteria	Paracoccus thiocyanatus SST [QFCQ]	3442	3531	+	Ser	GGA	[ENA]	○
	>W1810697115	QLUV01000003	Alphaproteobacteria	Paracoccus endophyticus SYSUP0003 [QLUV]	37662	37573	-	Ser	GGA	[ENA]	○
	>W1810750729	QOZU01000005	Alphaproteobacteria	Paracoccus pantotrophus KS1 [QOZU]	34731	34642	-	Ser	GGA	[ENA]	○
	>W1810762340	QPML01000104	Alphaproteobacteria	Paracoccus versutus MAL 1HM19 [QPML]	11472	11383	-	Ser	GGA	[ENA]	○
	>W1810862253	QTUJ01000002	Alphaproteobacteria	Paracoccus versutus DSM 17099 [QTUJ]	908029	908118	+	Ser	GGA	[ENA]	○
	>W1810884843	QUMX01000005	Alphaproteobacteria	Paracoccus versutus DSM 582 [QUMX]	28061	28150	+	Ser	GGA	[ENA]	○
	>W2010099729	BJUR01000052	Alphaproteobacteria	Paracoccus denitrificans NBRC 102528 [BJUR]	5293	5204	-	Ser	GGA	[ENA]	○
	>W2010415891	FXTK01000005	Alphaproteobacteria	Paracoccus laeviglucosivorans DSM 100094 [FXTK]	286715	286804	+	Ser	GGA	[ENA]	○
	>W2010529086	JAAOHY010000001	Alphaproteobacteria	Paracoccus sp. 12-3 [JAAOHY]	1116964	1116875	-	Ser	GGA	[ENA]	○
	>W2010712163	JACHOD010000043	Alphaproteobacteria	Paracoccus denitrificans DSM 104981 [JACHOD]	17937	18026	+	Ser	GGA	[ENA]	○
	>W2010738942	JACJFU010000032	Alphaproteobacteria	Paracoccus sp. MC1854 [JACJFU]	5938	5849	-	Ser	GGA	[ENA]	○
	>W2010738984	JACJFV010000027	Alphaproteobacteria	Paracoccus sp. MC1862 [JACJFV]	26887	26976	+	Ser	GGA	[ENA]	○
	>W2011070220	NSJZ01000002	Alphaproteobacteria	Paracoccus sp. WN007 [NSJZ]	324211	324300	+	Ser	GGA	[ENA]	○
	>W2011375658	RBLI01000001	Alphaproteobacteria	Paracoccus pantotrophus DSM 2944 [RBLI]	1120930	1121019	+	Ser	GGA	[ENA]	○
	>W2011428960	RIAQ01000002	Alphaproteobacteria	Paracoccus pantotrophus NJUST38 [RIAQ]	19560	19471	-	Ser	GGA	[ENA]	○
	>W2011542390	SDEA01000014	Alphaproteobacteria	Paracoccus sp. CFH 10530 [SDEA]	17637	17726	+	Ser	GGA	[ENA]	○
	>W2011555049	SELD02000029	Alphaproteobacteria	Paracoccus sp. JC 501 [SELD]	1477	1388	-	Ser	GGA	[ENA]	○
	>W2011662652	SOKV01000371	Alphaproteobacteria	Paracoccus sp. DMF [SOKV]	1033	1122	+	Ser	GGA	[ENA]	○
	>W2011971138	VCBQ01000117	Alphaproteobacteria	Paracoccus sp. FO-3 [VCBQ]	11348	11259	-	Ser	GGA	[ENA]	○
	>W2012065491	VJYZ01000032	Alphaproteobacteria	Paracoccus marinus NBRC 1000637 [VJYZ]	237	148	-	Ser	GGA	[ENA]	○
	>W2012106130	VOPL01000001	Alphaproteobacteria	Paracoccus sp. TK008 [VOPL]	48712	48623	-	Ser	GGA	[ENA]	○
	>W2012357864	WKKA01000016	Alphaproteobacteria	Paracoccus sp. S-4012 [WKKA]	47599	47688	+	Ser	GGA	[ENA]	○
	>W2012378834	WMIF01000047	Alphaproteobacteria	Paracoccus limosus JCM 17370 [WMIF]	13360	13449	+	Ser	GGA	[ENA]	○
	>W2110104214	CAJGAB010000003	Alphaproteobacteria	Paracoccus yeei Marseille-P2668 [CAJGAB]	30407	30318	-	Ser	GGA	[ENA]	○
	>W2110235100	JACLBQ010000059	Alphaproteobacteria	Paracoccus yeei S/N-202-OC-B2 [JACLBQ]	99561	99650	+	Ser	GGA	[ENA]	○
	>W2110409089	JAEHFP010000002	Alphaproteobacteria	Paracoccus binzhouensis wg1 [JAEHFP]	159520	159431	-	Ser	GGA	[ENA]	○
	>W2110508842	JAFL01000044	Alphaproteobacteria	Paracoccus sp. J56 [JAFL]	13686	13775	+	Ser	GGA	[ENA]	○
	>W2110578824	JAGXCX010000001	Alphaproteobacteria	Paracoccus sp. pheM1 [JAGXCX]	660369	660458	+	Ser	GGA	[ENA]	○
	>W2110639359	JAHQZU010000040	Alphaproteobacteria	Paracoccus sp. Z118 [JAHQZU]	1988	1899	-	Ser	GGA	[ENA]	○
	>C211236526	CP067225	Alphaproteobacteria	Paracoccus sp. MC1862 [CP067225]	1108966	1108877	-	Ser	GGA	-	○
	>C211275225	CP070368	Alphaproteobacteria	Paracoccus sp. H4-D09 [CP070368, CP070371]	1496754	1496843	+	Ser	GGA	-	○
	>C231043940	CP035284	Alphaproteobacteria	Paracoccus versutus UW1 [CP035284]	2100849	2100938	+	Ser	GGA	-	○
	>C231242512	CP087598	Alphaproteobacteria	Paracoccus sp. MA [CP087597, CP087598]	1475086	1474997	-	Ser	GGA	-	○
	>C231569210	CP115757	Alphaproteobacteria	Paracoccus sp. SCSIO 75233 [CP115757]	1969839	1969750	-	Ser	GGA	-	○
	>C231569280	CP115775	Alphaproteobacteria	Paracoccus sp. SCSIO 80058 [CP115775]	901076	901165	+	Ser	GGA	-	○
	>C231569325	CP115784	Alphaproteobacteria	Paracoccus sp. SCSIO 75817 [CP115784]	1205873	1205962	+	Ser	GGA	-	○
	>C241046109	CP038197	Alphaproteobacteria	Paracoccus versutus DSM 17099 [CP038197]	817324	817235	-	Ser	GGA	-	○
	>C241046133	CP038203	Alphaproteobacteria	Paracoccus pantotrophus DSM 11072 [CP038203]	1835389	1835300	-	Ser	GGA	-	○
	>C241085784	CP044081	Alphaproteobacteria	Paracoccus yeei FDAARGOS_643 [CP044081]	2920486	2920397	-	Ser	GGA	-	○
	>C241089160	CP044426	Alphaproteobacteria	Paracoccus pantotrophus DSM 2944 [CP044423, CP044426]	1193909	1193820	-	Ser	GGA	-	○
	>C241091700	CP045073	Alphaproteobacteria	Paracoccus kondratievae BJQ0001 [CP045072, CP045073]	708657	708568	-	Ser	GGA	-	○
	>C241151075	CP051542	Alphaproteobacteria	Paracoccus sanguinis OM2164 [CP051542]	339773	339684	-	Ser	GGA	-	○
	>C241174533	CP058690	Alphaproteobacteria	Paracoccus pantotrophus ACCC10489 [CP058689, CP058690]	1140164	1140075	-	Ser	GGA	-	○
	>C241192438	CP098360	Alphaproteobacteria	Paracoccus sp. TOH [CP098360, CP098361]	1816558	1816469	-	Ser	GGA	-	○
	>C241218641	CP109863	Alphaproteobacteria	Paracoccus aminovorans BM109 [CP109863]	1914188	1914099	-	Ser	GGA	-	○
	>C241358944	CP141052	Alphaproteobacteria	Paracoccus denitrificans HAMBI_2443 [CP141052]	1156848	1156759	-	Ser	GGA	-	○
	>W2310022750	BSFH01000090	Alphaproteobacteria	Paracoccus kondratievae VKM B-2222 [BSFH]	897	808	-	Ser	GGA	[ENA]	○
	>W2310026394	BSPN01000064	Alphaproteobacteria	Paracoccus marinus NBRC 100637 [BSPN]	235	146	-	Ser	GGA	[ENA]	○
	>C11117031	CP002897	Alphaproteobacteria	Paracoccus denitrificans [CP002897]	755260	755349	+	Ser	GGA	[Ensembl]	○
	>W1511348575	JRKN01000048	Alphaproteobacteria	Paracoccus halophilus JCM 14014 [JRKN]	14676	14765	+	Ser	GGA	[ENA]	○
	>W1511348594	JRKO01000007	Alphaproteobacteria	Paracoccus versutus DSM 582 [JRKO]	108658	108569	-	Ser	GGA	[ENA]	○
	>W1511348641	JRKP01000012	Alphaproteobacteria	Paracoccus sanguinis 39524 [JRKP]	20358	20447	+	Ser	GGA	[ENA]	○
	>W1511348689	JRKQ01000024	Alphaproteobacteria	Paracoccus sanguinis 5503 [JRKQ]	8323	8412	+	Ser	GGA	[ENA]	○
	>W1511348757	JRKR01000131	Alphaproteobacteria	Paracoccus sanguinis 10990 [JRKR]	7686	7775	+	Ser	GGA	[ENA]	○
	>W1511348766	JRKS01000001	Alphaproteobacteria	Paracoccus sphaerophysae HAMBI 3106 [JRKS]	166160	166249	+	Ser	GGA	[ENA]	○
	>W1511348838	JRKT01000052	Alphaproteobacteria	Paracoccus sanguinis 4681 [JRKT]	14295	14206	-	Ser	GGA	[ENA]	○
	>W11143062	AEPN01000058	Alphaproteobacteria	Paracoccus sp. TRP [AEPN]	3681	3592	-	Ser	GGA	[ENA]	○
	>W1610049828	BBFH01000159	Alphaproteobacteria	Paracoccus denitrificans JCM 21484 [BBFH]	2948	3037	+	Ser	GGA	[ENA]	○
	>W1610716551	LLWQ01000217	Alphaproteobacteria	Paracoccus sp. MKU1 [LLWQ]	1855	1766	-	Ser	GGA	[ENA]	○
	>W1610750135	LNBC01000030	Alphaproteobacteria	Paracoccus aminovorans [LNBC]	123451	123540	+	Ser	GGA	[ENA]	○
	>W1710046227	BBFH01000159	Alphaproteobacteria	Paracoccus denitrificans JCM 21484 [BBFH]	2948	3037	+	Ser	GGA	[ENA]	○
	>W1710513620	FNAH01000005	Alphaproteobacteria	Paracoccus isoporae [FNAH]	216237	216326	+	Ser	GGA	[ENA]	○
	>W1710518480	FNEA01000044	Alphaproteobacteria	Paracoccus denitrificans [FNEA]	21731	21820	+	Ser	GGA	[ENA]	○
	>W1710521172	FNGE01000005	Alphaproteobacteria	Paracoccus chinensis [FNGE]	2348	2259	-	Ser	GGA	[ENA]	○
	>W1710528221	FNNA01000003	Alphaproteobacteria	Paracoccus sanguinis [FNNA]	20326	20415	+	Ser	GGA	[ENA]	○
	>W1710555571	FOJO01000045	Alphaproteobacteria	Paracoccus halophilus [FOJO]	1518	1429	-	Ser	GGA	[ENA]	○
	>W1710563592	FOPU01000023	Alphaproteobacteria	Paracoccus aminovorans [FOPU]	55259	55348	+	Ser	GGA	[ENA]	○
	>W1710571587	FOWA01000066	Alphaproteobacteria	Paracoccus pantotrophus [FOWA]	690	601	-	Ser	GGA	[ENA]	○
	>W1710574701	FOYK01000044	Alphaproteobacteria	Paracoccus denitrificans [FOYK]	5822	5733	-	Ser	GGA	[ENA]	○
	>W1710581766	FPKI01000010	Alphaproteobacteria	Paracoccus pantotrophus [FPKI]	14316	14227	-	Ser	GGA	[ENA]	○
	>W1710596189	FTMK01000007	Alphaproteobacteria	Paracoccus thiocyanatus [FTMK]	108937	108848	-	Ser	GGA	[ENA]	○
	>W1710608136	FXAQ01000044	Alphaproteobacteria	Paracoccus sp. J56 [FXAQ]	13686	13775	+	Ser	GGA	[ENA]	○
Identical group No.57486 (1 seq.)
	>PL201000059	AP022849	Alphaproteobacteria	Bosea sp. ANAM02 plasmid:pANAM02 [AP022849]	82681	82592	-	Ser	GGA	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK