tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = TAA

HIT: 10 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.134823 (5 seq.)
>C171039555	CP015583	Alphaproteobacteria	Roseomonas gilardii U14-5 [CP015583, CP015584]	3766345	3766261	-	Leu	TAA	-	○
>C181102041	CP024588	Alphaproteobacteria	Roseomonas sp. FDAARGOS_362 [CP024588]	2553463	2553379	-	Leu	TAA	-	○
>PL201000246	CP015583	Alphaproteobacteria	Roseomonas gilardii U14-5 plasmid: [CP015583]	3766345	3766261	-	Leu	TAA	[ENA]	○
>C231412905	CP099471	Alphaproteobacteria	Roseomonas mucosa TT14 [CP099471]	2393922	2394006	+	Leu	TAA	-	○
>W1710084293	BDLP01000296	Alphaproteobacteria	Roseomonas sp. TAS13 [BDLP]	3731	3647	-	Leu	TAA	[ENA]	○
Identical group No.174764 (44 seq.)
>W1710853415	LLWQ01000175	Alphaproteobacteria	Paracoccus sp. MKU1 [LLWQ]	21804	21719	-	Leu	TAA	[ENA]	○
>W131158885	AQUO01000001	Alphaproteobacteria	Paracoccus sp. N5 [AQUO]	483512	483597	+	Leu	TAA	[ENA]	○
>C016021	CP000489	Alphaproteobacteria	Paracoccus denitrificans PD1222 [CP000489, CP000490]	2057161	2057246	+	Leu	TAA	[Ensembl]	○
>WENV180285362	OBID01356342	[OBID] metagenome; sludge		170	255	+	Leu	TAA	[ENA]	○
>W141216635	AZVA01000011	Alphaproteobacteria	Paracoccus sp. J55 [AZVA]	40362	40277	-	Leu	TAA	[ENA]	○
>W141277324	JAEM01000052	Alphaproteobacteria	Paracoccus pantotrophus J46 [JAEM]	14039	13954	-	Leu	TAA	[ENA]	○
>W141277366	JAEN01000014	Alphaproteobacteria	Paracoccus sp. J39 [JAEN]	54654	54739	+	Leu	TAA	[ENA]	○
>W141279598	JAGK01000051	Alphaproteobacteria	Paracoccus pantotrophus J40 [JAGK]	10899	10984	+	Leu	TAA	[ENA]	○
>PL191000050	CP000489	Alphaproteobacteria	Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489)	2057161	2057246	+	Leu	TAA	[Ensembl]	○
>C191134371	CP035090	Alphaproteobacteria	Paracoccus denitrificans ATCC 19367 [CP035090, CP035091]	798451	798536	+	Leu	TAA	-	○
>W09103069	AAIT01000012	Alphaproteobacteria	Paracoccus denitrificans PD1222 [AAIT]	92718	92633	-	Leu	TAA	[ENA]	○
>W1810235996	PPGA01000013	Alphaproteobacteria	Paracoccus denitrificans ISTOD1 [PPGA]	57865	57950	+	Leu	TAA	[ENA]	○
>W1810750747	QOZU01000075	Alphaproteobacteria	Paracoccus pantotrophus KS1 [QOZU]	12721	12636	-	Leu	TAA	[ENA]	○
>W1810759484	QPJL01000013	Alphaproteobacteria	Paracoccus lutimaris CECT 8525 [QPJL]	36504	36419	-	Leu	TAA	[ENA]	○
>W1810762315	QPML01000033	Alphaproteobacteria	Paracoccus versutus MAL 1HM19 [QPML]	28795	28710	-	Leu	TAA	[ENA]	○
>W1810862257	QTUJ01000002	Alphaproteobacteria	Paracoccus versutus DSM 17099 [QTUJ]	735576	735491	-	Leu	TAA	[ENA]	○
>W1810884870	QUMX01000038	Alphaproteobacteria	Paracoccus versutus DSM 582 [QUMX]	11618	11703	+	Leu	TAA	[ENA]	○
>W2010099713	BJUR01000015	Alphaproteobacteria	Paracoccus denitrificans NBRC 102528 [BJUR]	76751	76836	+	Leu	TAA	[ENA]	○
>W2010712155	JACHOD010000017	Alphaproteobacteria	Paracoccus denitrificans DSM 104981 [JACHOD]	76844	76929	+	Leu	TAA	[ENA]	○
>W2011375676	RBLI01000001	Alphaproteobacteria	Paracoccus pantotrophus DSM 2944 [RBLI]	913646	913561	-	Leu	TAA	[ENA]	○
>W2011428964	RIAQ01000005	Alphaproteobacteria	Paracoccus pantotrophus NJUST38 [RIAQ]	62568	62653	+	Leu	TAA	[ENA]	○
>W2011971135	VCBQ01000096	Alphaproteobacteria	Paracoccus sp. FO-3 [VCBQ]	12582	12497	-	Leu	TAA	[ENA]	○
>W2110578853	JAGXCX010000001	Alphaproteobacteria	Paracoccus sp. pheM1 [JAGXCX]	476851	476766	-	Leu	TAA	[ENA]	○
>C211275224	CP070368	Alphaproteobacteria	Paracoccus sp. H4-D09 [CP070368, CP070371]	1374047	1374132	+	Leu	TAA	-	○
>C231043951	CP035284	Alphaproteobacteria	Paracoccus versutus UW1 [CP035284]	1907602	1907517	-	Leu	TAA	-	○
>C231242498	CP087598	Alphaproteobacteria	Paracoccus sp. MA [CP087597, CP087598]	1740283	1740368	+	Leu	TAA	-	○
>C241046084	CP038197	Alphaproteobacteria	Paracoccus versutus DSM 17099 [CP038197]	989777	989862	+	Leu	TAA	-	○
>C241046128	CP038203	Alphaproteobacteria	Paracoccus pantotrophus DSM 11072 [CP038203]	2024814	2024899	+	Leu	TAA	-	○
>C241089143	CP044426	Alphaproteobacteria	Paracoccus pantotrophus DSM 2944 [CP044423, CP044426]	1401190	1401275	+	Leu	TAA	-	○
>W2130025366	JAEHFP010000109	Alphaproteobacteria	Paracoccus binzhouensis wg1 [JAEHFP]	4768	4853	+	Leu	TAA	[ENA]	○
>C241174516	CP058690	Alphaproteobacteria	Paracoccus pantotrophus ACCC10489 [CP058689, CP058690]	1335884	1335969	+	Leu	TAA	-	○
>C241192426	CP098360	Alphaproteobacteria	Paracoccus sp. TOH [CP098360, CP098361]	394295	394380	+	Leu	TAA	-	○
>C241218624	CP109863	Alphaproteobacteria	Paracoccus aminovorans BM109 [CP109863]	2262405	2262490	+	Leu	TAA	-	○
>C241358955	CP141052	Alphaproteobacteria	Paracoccus denitrificans HAMBI_2443 [CP141052]	48280	48195	-	Leu	TAA	-	○
>C11117057	CP002897	Alphaproteobacteria	Paracoccus denitrificans [CP002897]	1594255	1594170	-	Leu	TAA	[Ensembl]	○
>W1511348629	JRKO01000096	Alphaproteobacteria	Paracoccus versutus DSM 582 [JRKO]	55	140	+	Leu	TAA	[ENA]	○
>W121059999	AJFB01000172	Alphaproteobacteria	Paracoccus denitrificans SD1 [AJFB]	83	168	+	Leu	TAA	[ENA]	○
>W1610049818	BBFH01000018	Alphaproteobacteria	Paracoccus denitrificans JCM 21484 [BBFH]	4291	4376	+	Leu	TAA	[ENA]	○
>W1610716539	LLWQ01000175	Alphaproteobacteria	Paracoccus sp. MKU1 [LLWQ]	21804	21719	-	Leu	TAA	[ENA]	○
>W1710046217	BBFH01000018	Alphaproteobacteria	Paracoccus denitrificans JCM 21484 [BBFH]	4291	4376	+	Leu	TAA	[ENA]	○
>W1710518476	FNEA01000024	Alphaproteobacteria	Paracoccus denitrificans [FNEA]	9635	9550	-	Leu	TAA	[ENA]	○
>W1710571582	FOWA01000045	Alphaproteobacteria	Paracoccus pantotrophus [FOWA]	13969	13884	-	Leu	TAA	[ENA]	○
>W1710574697	FOYK01000024	Alphaproteobacteria	Paracoccus denitrificans [FOYK]	9668	9583	-	Leu	TAA	[ENA]	○
>W1710581782	FPKI01000042	Alphaproteobacteria	Paracoccus pantotrophus [FPKI]	31728	31643	-	Leu	TAA	[ENA]	○
Identical group No.177387 (49 seq.)
>W1710917429	LNWA01000004	Alphaproteobacteria	Tritonibacter mobilis [LNWA]	52646	52561	-	Leu	TAA	[ENA]	○
>W1710917602	LNWD01000026	Alphaproteobacteria	Tritonibacter mobilis [LNWD]	29630	29715	+	Leu	TAA	[ENA]	○
>W1710917698	LNWF01000023	Alphaproteobacteria	Tritonibacter mobilis [LNWF]	52690	52605	-	Leu	TAA	[ENA]	○
>W1710917741	LNWG01000029	Alphaproteobacteria	Tritonibacter mobilis [LNWG]	52646	52561	-	Leu	TAA	[ENA]	○
>W1710917781	LNWH01000019	Alphaproteobacteria	Tritonibacter mobilis [LNWH]	29630	29715	+	Leu	TAA	[ENA]	○
>W1710917836	LNWI01000029	Alphaproteobacteria	Tritonibacter mobilis [LNWI]	52646	52561	-	Leu	TAA	[ENA]	○
>W1710917844	LNWJ01000001	Alphaproteobacteria	Tritonibacter mobilis [LNWJ]	29630	29715	+	Leu	TAA	[ENA]	○
>W1710917924	LNWK01000029	Alphaproteobacteria	Tritonibacter mobilis [LNWK]	29630	29715	+	Leu	TAA	[ENA]	○
>W1710917973	LNWL01000034	Alphaproteobacteria	Tritonibacter mobilis [LNWL]	29654	29739	+	Leu	TAA	[ENA]	○
>W1710918018	LNWM01000022	Alphaproteobacteria	Tritonibacter mobilis [LNWM]	29654	29739	+	Leu	TAA	[ENA]	○
>W1710918070	LNWN01000033	Alphaproteobacteria	Tritonibacter mobilis [LNWN]	52646	52561	-	Leu	TAA	[ENA]	○
>W1710918112	LNWO01000018	Alphaproteobacteria	Tritonibacter mobilis [LNWO]	52646	52561	-	Leu	TAA	[ENA]	○
>W1710918165	LNWP01000036	Alphaproteobacteria	Tritonibacter mobilis [LNWP]	29654	29739	+	Leu	TAA	[ENA]	○
>W1710918211	LNWQ01000032	Alphaproteobacteria	Tritonibacter mobilis [LNWQ]	29631	29716	+	Leu	TAA	[ENA]	○
>W1710918834	LNXD01000024	Alphaproteobacteria	Tritonibacter mobilis [LNXD]	52728	52643	-	Leu	TAA	[ENA]	○
>W1710918929	LNXF01000017	Alphaproteobacteria	Tritonibacter mobilis [LNXF]	52646	52561	-	Leu	TAA	[ENA]	○
>W1710919060	LNXI01000004	Alphaproteobacteria	Tritonibacter mobilis [LNXI]	52646	52561	-	Leu	TAA	[ENA]	○
>W1710919126	LNXJ01000025	Alphaproteobacteria	Tritonibacter mobilis [LNXJ]	29630	29715	+	Leu	TAA	[ENA]	○
>W1710919179	LNXK01000036	Alphaproteobacteria	Tritonibacter mobilis [LNXK]	29630	29715	+	Leu	TAA	[ENA]	○
>W1710919223	LNXL01000020	Alphaproteobacteria	Tritonibacter mobilis [LNXL]	29654	29739	+	Leu	TAA	[ENA]	○
>W1710919274	LNXM01000029	Alphaproteobacteria	Tritonibacter mobilis [LNXM]	52646	52561	-	Leu	TAA	[ENA]	○
>W1710919282	LNXN01000002	Alphaproteobacteria	Tritonibacter mobilis [LNXN]	29631	29716	+	Leu	TAA	[ENA]	○
>W1710919366	LNXO01000030	Alphaproteobacteria	Tritonibacter mobilis [LNXO]	29723	29808	+	Leu	TAA	[ENA]	○
>PL171001014	CP015231	Alphaproteobacteria	Ruegeria mobilis F1926 plasmid:unnamed1	149838	149923	+	Leu	TAA	[ENA]	○
>W131137643	AQCH01000032	Alphaproteobacteria	Tritonibacter mobilis F1926 [AQCH]	575	490	-	Leu	TAA	[ENA]	○
>W1511518756	JXYG01000025	Alphaproteobacteria	Tritonibacter mobilis S1942 [JXYG]	52647	52562	-	Leu	TAA	[ENA]	○
>W1610775327	LNWA01000004	Alphaproteobacteria	Tritonibacter mobilis [LNWA]	52646	52561	-	Leu	TAA	[ENA]	○
>W1610775500	LNWD01000026	Alphaproteobacteria	Tritonibacter mobilis [LNWD]	29630	29715	+	Leu	TAA	[ENA]	○
>W1610775596	LNWF01000023	Alphaproteobacteria	Tritonibacter mobilis [LNWF]	52690	52605	-	Leu	TAA	[ENA]	○
>W1610775639	LNWG01000029	Alphaproteobacteria	Tritonibacter mobilis [LNWG]	52646	52561	-	Leu	TAA	[ENA]	○
>W1610775679	LNWH01000019	Alphaproteobacteria	Tritonibacter mobilis [LNWH]	29630	29715	+	Leu	TAA	[ENA]	○
>W1610775734	LNWI01000029	Alphaproteobacteria	Tritonibacter mobilis [LNWI]	52646	52561	-	Leu	TAA	[ENA]	○
>W1610775742	LNWJ01000001	Alphaproteobacteria	Tritonibacter mobilis [LNWJ]	29630	29715	+	Leu	TAA	[ENA]	○
>W1610775822	LNWK01000029	Alphaproteobacteria	Tritonibacter mobilis [LNWK]	29630	29715	+	Leu	TAA	[ENA]	○
>W1610775871	LNWL01000034	Alphaproteobacteria	Tritonibacter mobilis [LNWL]	29654	29739	+	Leu	TAA	[ENA]	○
>W1610775916	LNWM01000022	Alphaproteobacteria	Tritonibacter mobilis [LNWM]	29654	29739	+	Leu	TAA	[ENA]	○
>W1610775968	LNWN01000033	Alphaproteobacteria	Tritonibacter mobilis [LNWN]	52646	52561	-	Leu	TAA	[ENA]	○
>W1610776010	LNWO01000018	Alphaproteobacteria	Tritonibacter mobilis [LNWO]	52646	52561	-	Leu	TAA	[ENA]	○
>W1610776063	LNWP01000036	Alphaproteobacteria	Tritonibacter mobilis [LNWP]	29654	29739	+	Leu	TAA	[ENA]	○
>W1610776109	LNWQ01000032	Alphaproteobacteria	Tritonibacter mobilis [LNWQ]	29631	29716	+	Leu	TAA	[ENA]	○
>W1610776732	LNXD01000024	Alphaproteobacteria	Tritonibacter mobilis [LNXD]	52728	52643	-	Leu	TAA	[ENA]	○
>W1610776827	LNXF01000017	Alphaproteobacteria	Tritonibacter mobilis [LNXF]	52646	52561	-	Leu	TAA	[ENA]	○
>W1610776958	LNXI01000004	Alphaproteobacteria	Tritonibacter mobilis [LNXI]	52646	52561	-	Leu	TAA	[ENA]	○
>W1610777024	LNXJ01000025	Alphaproteobacteria	Tritonibacter mobilis [LNXJ]	29630	29715	+	Leu	TAA	[ENA]	○
>W1610777077	LNXK01000036	Alphaproteobacteria	Tritonibacter mobilis [LNXK]	29630	29715	+	Leu	TAA	[ENA]	○
>W1610777121	LNXL01000020	Alphaproteobacteria	Tritonibacter mobilis [LNXL]	29654	29739	+	Leu	TAA	[ENA]	○
>W1610777172	LNXM01000029	Alphaproteobacteria	Tritonibacter mobilis [LNXM]	52646	52561	-	Leu	TAA	[ENA]	○
>W1610777180	LNXN01000002	Alphaproteobacteria	Tritonibacter mobilis [LNXN]	29631	29716	+	Leu	TAA	[ENA]	○
>W1610777264	LNXO01000030	Alphaproteobacteria	Tritonibacter mobilis [LNXO]	29723	29808	+	Leu	TAA	[ENA]	○
Identical group No.177983 (8 seq.)
>W1712104570	NIPU01000047	Alphaproteobacteria	Haematobacter massiliensis [NIPU]	7714	7629	-	Leu	TAA	[ENA]	○
>W1712104600	NIPV01000096	Alphaproteobacteria	Haematobacter missouriensis [NIPV]	54073	53988	-	Leu	TAA	[ENA]	○
>W1712104654	NIPW01000068	Alphaproteobacteria	Haematobacter genomosp. 1 [NIPW]	17105	17190	+	Leu	TAA	[ENA]	○
>W1712104681	NIPX01000023	Alphaproteobacteria	Haematobacter missouriensis [NIPX]	166432	166517	+	Leu	TAA	[ENA]	○
>W1712104714	NIPY01000020	Alphaproteobacteria	Haematobacter massiliensis [NIPY]	13524	13609	+	Leu	TAA	[ENA]	○
>W141461729	JFGS01000047	Alphaproteobacteria	Haematobacter missouriensis [JFGS]	17261	17346	+	Leu	TAA	[ENA]	○
>PL191001306	CP035513	Alphaproteobacteria	Haematobacter massiliensis OT1 plasmid:pOT1-3 (CP035513)	267827	267742	-	Leu	TAA	[ENA]	○
>W141523480	JGYG01000007	Alphaproteobacteria	Haematobacter massiliensis [JGYG]	253866	253781	-	Leu	TAA	[ENA]	○
Identical group No.178338 (3 seq.)
>WENV181227941	OFDN01083855	[OFDN] hot springs metagenome; Water		201	286	+	Leu	TAA	[ENA]	○
>PL191000472	CP025613	Alphaproteobacteria	Niveispirillum cyanobacteriorum TH16 plasmid:unnamed1 (CP025613)	528809	528894	+	Leu	TAA	[ENA]	○
>W2110023982	BMGN01000001	Alphaproteobacteria	Niveispirillum cyanobacteriorum CGMCC 1.12958 [BMGN]	697822	697737	-	Leu	TAA	[ENA]	○
Identical group No.188317 (1 seq.)
>PL201000028	AP022338	Alphaproteobacteria	Mameliella alba KU6B plasmid:pKUB257 [AP022338]	158193	158108	-	Leu	TAA	[ENA]	○
Identical group No.195303 (1 seq.)
>PL171000999	CP014688	Alphaproteobacteria	Acetobacter persici TMW2.1084 plasmid:pAC1084_1	283375	283290	-	Leu	TAA	[ENA]	○
Identical group No.195306 (1 seq.)
>PL171001246	CP016463	Alphaproteobacteria	Bosea sp. RAC05 plasmid:pBSY19_1	471519	471604	+	Leu	TAA	[ENA]	○
Identical group No.195308 (1 seq.)
>PL191001404	CP039965	Alphaproteobacteria	Pseudorhodobacter sp. S12M18 plasmid:unnamed1 (CP039965)	824262	824179	-	Leu	TAA	[ENA]	○
Identical group No.197218 (4 seq.)
>PL171001007	CP014801	Alphaproteobacteria	Thiobacimonas profunda JLT2016 plasmid:pTPRO5	81565	81480	-	Leu	TAA	[ENA]	○
>W2011354005	RAPJ01000069	Alphaproteobacteria	Salipiger sp. D13 [RAPJ]	16364	16279	-	Leu	TAA	[ENA]	○
>W2110021949	BMEW01000030	Alphaproteobacteria	Salipiger profundus CGMCC 1.12377 [BMEW]	4651	4736	+	Leu	TAA	[ENA]	○
>W1710015463	AQQR01000020	Alphaproteobacteria	Marinibacterium profundimaris [AQQR]	70174	70089	-	Leu	TAA	[ENA]	○