tRNA genes clustered and arranged according to each identical group

Alveolata

Anticodon = GCC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.658215 (76 seq.)
>WENV180114117 OAPR01167068 [OAPR] marine metagenome; seawater 210 139 - Gly GCC [ENA] ¢þ
>WENV180294737 OBIY01438556 [OBIY] beach sand metagenome; beach sand 140 66 - Gly GCC [ENA] ¢þ
>WENV180309855 OBJS01061443 [OBJS] beach sand metagenome; beach sand 157 83 - Gly GCC [ENA] ¢þ
>WENV180365413 OBOB01129462 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 105 177 + Gly GCC [ENA] ¢þ
>WENV180368759 OBOG01000106 [OBOG] marine metagenome; seawater 4012 4084 + Gly GCC [ENA] ¢þ
>WENV180375609 OBOL01031421 [OBOL] marine metagenome; Surface water 533 605 + Gly GCC [ENA] ¢þ
>WENV180376718 OBOM01061117 [OBOM] marine metagenome; Seawater 287 358 + Gly GCC [ENA] ¢þ
>WENV180396427 OBPV01003635 [OBPV] marine metagenome; ENVO:00002010 934 861 - Gly GCC [ENA] ¢þ
>WENV180590002 OCOS01063934 [OCOS] marine metagenome; Sterile flask 323 252 - Gly GCC [ENA] ¢þ
>WENV180590512 OCOT01046545 [OCOT] marine metagenome; ENVO:00002010 155 82 - Gly GCC [ENA] ¢þ
>WENV180593607 OCOX01102223 [OCOX] marine metagenome; ENVO:00002010 97 169 + Gly GCC [ENA] ¢þ
>WENV180593983 OCOY01008158 [OCOY] marine metagenome; ENVO:00002010 606 534 - Gly GCC [ENA] ¢þ
>WENV180650312 OCSY01005776 [OCSY] marine metagenome; 30 L Plastic container 368 296 - Gly GCC [ENA] ¢þ
>WENV181092562 OEBK01008199 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 183 254 + Gly GCC [ENA] ¢þ
>WENV181324241 OFLD01001255 [OFLD] marine metagenome; sea ice 545 618 + Gly GCC [ENA] ¢þ
>WENV181324663 OFLG01001922 [OFLG] seawater metagenome; seawater 610 539 - Gly GCC [ENA] ¢þ
>WENV181385790 OFRK01004161 [OFRK] marine metagenome; sea ice 547 474 - Gly GCC [ENA] ¢þ
>WENV181415357 OGCL01008794 [OGCL] hot springs metagenome; Hot spring water 2414 2487 + Gly GCC [ENA] ¢þ
>WENV181416746 OGCL01137777 [OGCL] hot springs metagenome; Hot spring water 365 291 - Gly GCC [ENA] ¢þ
>WENV183054129 OLGR01018975 [OLGR] seawater metagenome; Sea water 353 424 + Gly GCC [ENA] ¢þ
>WENV183615209 OOEA01110650 [OOEA] marine metagenome; sea ice 56 129 + Gly GCC [ENA] ¢þ
>WENV183616227 OOEC01188643 [OOEC] marine metagenome; sea ice 158 85 - Gly GCC [ENA] ¢þ
>WENV183620873 OOFS01071014 [OOFS] marine metagenome; sea ice 473 402 - Gly GCC [ENA] ¢þ
>WENV183621085 OOFT01005586 [OOFT] marine metagenome; sea ice 694 765 + Gly GCC [ENA] ¢þ
>WENV183622934 OOFW01056155 [OOFW] marine metagenome; sea ice 179 252 + Gly GCC [ENA] ¢þ
>WENV183623522 OOGA01006636 [OOGA] marine metagenome; sea ice 245 316 + Gly GCC [ENA] ¢þ
>WENV183624582 OOGD01050388 [OOGD] marine metagenome; sea ice 360 434 + Gly GCC [ENA] ¢þ
>WENV183624624 OOGD01069672 [OOGD] marine metagenome; sea ice 237 310 + Gly GCC [ENA] ¢þ
>WENV183625566 OOGG01000634 [OOGG] marine metagenome; sea ice 181 108 - Gly GCC [ENA] ¢þ
>WENV183628004 OOGM01001265 [OOGM] marine metagenome; sea ice 1215 1288 + Gly GCC [ENA] ¢þ
>ENV08001716 ABNY01090914 saltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA 74 2 - Gly GCC [ENA] ¡û
>ENV08002200 ABON01008835 freshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 17 89 + Gly GCC [ENA] ¡û
>WENV170532241 CEWO01027341 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 180 109 - Gly GCC [ENA] ¢þ
>WENV170536370 CEWP01171334 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9317 9246 - Gly GCC [ENA] ¢þ
>WENV170569313 FLMP01166249 [FLMP] seawater metagenome; seawater 327 399 + Gly GCC [ENA] ¢þ
>WENV170605283 FUWD010466102 [FUWD] metagenome; unknown 69 141 + Gly GCC [ENA] ¢þ
>WENV170627039 FUWD013230872 [FUWD] metagenome; unknown 4681 4753 + Gly GCC [ENA] ¢þ
>WENV170630501 FUWD013310666 [FUWD] metagenome; unknown 8592 8664 + Gly GCC [ENA] ¢þ
>WENV170635056 JAHE01209431 [JAHE] sediment metagenome; lake sediment 512 587 + Gly GCC [ENA] ¢þ
>WENV170639216 JFJP01001700 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 17342 17269 - Gly GCC [ENA] ¢þ
>WENV170639238 JFJP01001704 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 8983 9058 + Gly GCC [ENA] ¢þ
>WENV170639272 JFJP01001727 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 3798 3725 - Gly GCC [ENA] ¢þ
>WENV170809357 MDSW01130591 [MDSW] marine metagenome; seawater 1948 1877 - Gly GCC [ENA] ¢þ
>WENV170828839 MDSY01156658 [MDSY] marine metagenome; seawater 5880 5951 + Gly GCC [ENA] ¢þ
>CHL1810000402 AP011960 Stramenopiles Fistulifera solaris JPCC DA0580 (AP011960) 109777 109703 - Gly GCC [ENA] ¡û
>CHL1810002652 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 12108 12037 - Gly GCC [ENA] ¡û
>CHL1810002678 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 14211 14140 - Gly GCC [ENA] ¡û
>CHL1810005317 JQ088178 Stramenopiles Ulnaria acus (JQ088178) 11935 11861 - Gly GCC [ENA] ¡û
>CHL1810008266 KC509520 Stramenopiles Asterionellopsis glacialis ccmp1717 (KC509520) 18979 19052 + Gly GCC [ENA] ¡û
>CHL1810008342 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 54767 54694 - Gly GCC [ENA] ¡û
>CHL1810008374 KC509523 Stramenopiles Didymosphenia geminata BCC011 (KC509523) 12324 12250 - Gly GCC [ENA] ¡û
>CHL1810008400 KC509524 Stramenopiles Leptocylindrus danicus ccmp1856 (KC509524) 11371 11298 - Gly GCC [ENA] ¡û
>CHL1810008428 KC509525 Stramenopiles Lithodesmium undulatum ccmp1797 (KC509525) 12118 12047 - Gly GCC [ENA] ¡û
>CHL1810010645 KF733443 Stramenopiles Eunotia naegelii utex FD354 (KF733443) 12662 12589 - Gly GCC [ENA] ¡û
>CHL1810013678 KJ958483 Stramenopiles Roundia cardiophora (KJ958483) 54503 54575 + Gly GCC [ENA] ¡û
>CHL1810013702 KJ958484 Stramenopiles Cerataulina daemon (KJ958484) 37054 37126 + Gly GCC [ENA] ¡û
>CHL1810013733 KJ958485 Stramenopiles Thalassiosira weissflogii (KJ958485) 54605 54677 + Gly GCC [ENA] ¡û
>CHL1810034291 KX619437 Stramenopiles Toxarium undulatum ECT3802 (KX619437) 19494 19421 - Gly GCC [ENA] ¡û
>CHL1810059268 MG755792 Stramenopiles Plagiogramma staurophorum (MG755792) 2014 1941 - Gly GCC [ENA] ¡û
>CHL1810059293 MG755793 Stramenopiles Rhizosolenia setigera (MG755793) 18409 18338 - Gly GCC [ENA] ¡û
>CHL1810059298 MG755794 Stramenopiles Plagiogrammopsis vanheurckii (MG755794) 38253 38324 + Gly GCC [ENA] ¡û
>CHL1810059329 MG755796 Stramenopiles Guinardia striata (MG755796) 43431 43503 + Gly GCC [ENA] ¡û
>CHL1810059376 MG755798 Stramenopiles Attheya longicornis (MG755798) 20443 20370 - Gly GCC [ENA] ¡û
>CHL1810059403 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 11888 11817 - Gly GCC [ENA] ¡û
>CHL1810059430 MG755800 Stramenopiles Entomoneis sp. (MG755800) 12080 12006 - Gly GCC [ENA] ¡û
>CHL1810059433 MG755801 Stramenopiles Triceratium dubium (MG755801) 33635 33708 + Gly GCC [ENA] ¡û
>CHL1810059516 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 30217 30144 - Gly GCC [ENA] ¡û
>CHL1810059525 MG755804 Stramenopiles Cyclotella pseudostelligera (MG755804) 54757 54829 + Gly GCC [ENA] ¡û
>CHL1810059571 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 15417 15346 - Gly GCC [ENA] ¡û
>CHL1810059597 MG755806 Stramenopiles Biddulphia tridens (MG755806) 16205 16132 - Gly GCC [ENA] ¡û
>CHL1810059629 MG755808 Stramenopiles Acanthoceras zachariasii (MG755808) 34994 35066 + Gly GCC [ENA] ¡û
>CHL090102746 EF067920 stramenopiles Phaeodactylum tricornutum 12341 12267 - Gly GCC [ENA] ¡û
>CHL090102755 EF067921 stramenopiles Thalassiosira pseudonana 55236 55308 + Gly GCC [ENA] ¡û
>CHL090103368 Z67753 stramenopiles Odontella sinensis 86067 85994 - Gly GCC [ENA] ¡û
>W1911638300 PVWJ01000056 Cyanobacteriota Merismopedia glauca CCAP 1448/3 [PVWJ] 13020 12949 - Gly GCC [ENA] ¡û
>W1610920054 LSSF01000062 Unclassified Thermoplasmatales archaeon SG8-52-4 [LSSF] 2406 2479 + Gly GCC [ENA] ¡û
Identical group No.669992 (1 seq.)
>CHL1810003211 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 55722 55651 - Gly GCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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