tRNA genes clustered and arranged according to each identical group

Alveolata

Anticodon = TGC

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.467517 (54 seq.)
>WENV180047684 MPLT02253983 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 401 328 - Ala TGC [ENA] ¢þ
>WENV180111821 OAPO01002162 [OAPO] marine metagenome; ENVO:00002010 571 644 + Ala TGC [ENA] ¢þ
>WENV180357997 OBNO01043135 [OBNO] marine metagenome; ENVO 00002150 237 164 - Ala TGC [ENA] ¢þ
>WENV180381421 OBOR01289905 [OBOR] marine metagenome; ENVO 00002227 348 276 - Ala TGC [ENA] ¢þ
>WENV180383852 OBOV01044189 [OBOV] marine metagenome; ENV:00002010 47 120 + Ala TGC [ENA] ¢þ
>WENV180391996 OBPO01000805 [OBPO] marine metagenome; seawater 2573 2500 - Ala TGC [ENA] ¢þ
>WENV180395306 OBPT01007516 [OBPT] marine metagenome; ENVO:00002010 seawater 72 145 + Ala TGC [ENA] ¢þ
>WENV180398948 OBQE01000882 [OBQE] marine metagenome; ENVO.00002150 454 381 - Ala TGC [ENA] ¢þ
>WENV180585088 OCOK01002093 [OCOK] marine metagenome; ENVO:00002010 340 267 - Ala TGC [ENA] ¢þ
>WENV180587675 OCOO01026710 [OCOO] marine metagenome; seawater 302 229 - Ala TGC [ENA] ¢þ
>WENV180589170 OCOR01003992 [OCOR] marine metagenome; ENVO:00002042 130 57 - Ala TGC [ENA] ¢þ
>WENV180650340 OCSY01010252 [OCSY] marine metagenome; 30 L Plastic container 194 267 + Ala TGC [ENA] ¢þ
>WENV181321425 OFKM01000145 [OFKM] marine metagenome; sea ice 2965 2892 - Ala TGC [ENA] ¢þ
>WENV181322002 OFKP01000081 [OFKP] marine metagenome; sea ice 1817 1890 + Ala TGC [ENA] ¢þ
>WENV181323033 OFKW01000546 [OFKW] marine metagenome; sea ice 2285 2212 - Ala TGC [ENA] ¢þ
>WENV181323460 OFKY01000162 [OFKY] marine metagenome; sea ice 48 121 + Ala TGC [ENA] ¢þ
>WENV181323702 OFKZ01000090 [OFKZ] marine metagenome; sea ice 3775 3702 - Ala TGC [ENA] ¢þ
>WENV181324706 OFLH01000088 [OFLH] marine metagenome; sea ice 1701 1774 + Ala TGC [ENA] ¢þ
>WENV181325146 OFLI01010163 [OFLI] seawater metagenome; seawater 782 709 - Ala TGC [ENA] ¢þ
>WENV182566334 OJEK01000944 [OJEK] seawater metagenome; Sea water 1554 1481 - Ala TGC [ENA] ¢þ
>WENV182592045 OJIP01014711 [OJIP] seawater metagenome; Sea water 104 177 + Ala TGC [ENA] ¢þ
>WENV183053980 OLGR01003823 [OLGR] seawater metagenome; Sea water 600 673 + Ala TGC [ENA] ¢þ
>WENV183055515 OLHD01000208 [OLHD] seawater metagenome; Sea water 2586 2513 - Ala TGC [ENA] ¢þ
>WENV183059918 OLHW01000389 [OLHW] seawater metagenome; Sea water 3594 3521 - Ala TGC [ENA] ¢þ
>WENV183615258 OOEB01000060 [OOEB] marine metagenome; sea ice 2210 2283 + Ala TGC [ENA] ¢þ
>WENV183618628 OOFO01012635 [OOFO] marine metagenome; seawater 723 650 - Ala TGC [ENA] ¢þ
>WENV183620344 OOFR01036841 [OOFR] marine metagenome; seawater 592 519 - Ala TGC [ENA] ¢þ
>WENV183620997 OOFT01001921 [OOFT] marine metagenome; sea ice 1478 1405 - Ala TGC [ENA] ¢þ
>WENV183625542 OOGG01000189 [OOGG] marine metagenome; sea ice 1676 1749 + Ala TGC [ENA] ¢þ
>WENV183626578 OOGJ01000360 [OOGJ] marine metagenome; seawater 394 321 - Ala TGC [ENA] ¢þ
>WENV183627307 OOGL01000097 [OOGL] marine metagenome; sea ice 4158 4085 - Ala TGC [ENA] ¢þ
>WENV183628193 OOGM01044793 [OOGM] marine metagenome; sea ice 526 453 - Ala TGC [ENA] ¢þ
>WENV183628477 OOGN01066026 [OOGN] marine metagenome; sea ice 231 304 + Ala TGC [ENA] ¢þ
>WENV170597779 FUWD010014144 [FUWD] metagenome; unknown 521 594 + Ala TGC [ENA] ¢þ
>WENV170615248 FUWD012852611 [FUWD] metagenome; unknown 724 651 - Ala TGC [ENA] ¢þ
>WENV170619524 FUWD013015675 [FUWD] metagenome; unknown 223 296 + Ala TGC [ENA] ¢þ
>WENV170627629 FUWD013234341 [FUWD] metagenome; unknown 223 296 + Ala TGC [ENA] ¢þ
>CHL1810002663 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 74094 74167 + Ala TGC [ENA] ¡û
>CHL1810002668 GU591328 Alveolata Kryptoperidinium foliaceum CCMP1326 (GU591328) 138204 138131 - Ala TGC [ENA] ¡û
>CHL1810008331 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 93176 93249 + Ala TGC [ENA] ¡û
>CHL1810008337 KC509522 Stramenopiles Cylindrotheca closterium ccmp1855 (KC509522) 154890 154817 - Ala TGC [ENA] ¡û
>CHL1810019294 KR709240 Stramenopiles Pseudo-nitzschia multiseries (KR709240) 42874 42801 - Ala TGC [ENA] ¡û
>CHL1810059338 MG755796 Stramenopiles Guinardia striata (MG755796) 115313 115240 - Ala TGC [ENA] ¡û
>CHL1810059343 MG755796 Stramenopiles Guinardia striata (MG755796) 64661 64588 - Ala TGC [ENA] ¡û
>CHL1810059363 MG755798 Stramenopiles Attheya longicornis (MG755798) 70788 70861 + Ala TGC [ENA] ¡û
>CHL1810059366 MG755798 Stramenopiles Attheya longicornis (MG755798) 124068 123995 - Ala TGC [ENA] ¡û
>CHL1810059415 MG755800 Stramenopiles Entomoneis sp. (MG755800) 118495 118568 + Ala TGC [ENA] ¡û
>CHL1810059423 MG755800 Stramenopiles Entomoneis sp. (MG755800) 67676 67603 - Ala TGC [ENA] ¡û
>CHL1810059499 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 87813 87886 + Ala TGC [ENA] ¡û
>CHL1810059504 MG755803 Stramenopiles Psammoneis obaidii (MG755803) 155021 154948 - Ala TGC [ENA] ¡û
>CHL1810059556 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 68552 68625 + Ala TGC [ENA] ¡û
>CHL1810059559 MG755805 Stramenopiles Biddulphia biddulphiana (MG755805) 117189 117116 - Ala TGC [ENA] ¡û
>CHL090102729 EF067920 stramenopiles Phaeodactylum tricornutum 66899 66972 + Ala TGC [ENA] ¡û
>CHL090102734 EF067920 stramenopiles Phaeodactylum tricornutum 114145 114072 - Ala TGC [ENA] ¡û
Identical group No.480776 (2 seq.)
>CHL1810003190 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 81937 82010 + Ala TGC [ENA] ¡û
>CHL1810003200 HM222968 Alveolata Chromerida sp. RM11 (HM222968) 61820 61747 - Ala TGC [ENA] ¡û
Identical group No.520390 (9 seq.)
>WENV180082128 MPMC02187665 [MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter 3046 3119 + Ala TGC [ENA] ¢þ
>WENV181372219 OFQW01030922 [OFQW] wastewater metagenome; Exp Tend NO 90WW 220 293 + Ala TGC [ENA] ¢þ
>WENV183807782 PVBE011230971 [PVBE] marine metagenome; water 735 808 + Ala TGC [ENA] ¢þ
>CHL1810002637 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 66055 66128 + Ala TGC [ENA] ¡û
>CHL1810002644 GU591327 Alveolata Durinskia baltica CS-38 (GU591327) 112939 112866 - Ala TGC [ENA] ¡û
>CHL1810008306 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 67142 67215 + Ala TGC [ENA] ¡û
>CHL1810008309 KC509521 Stramenopiles Coscinodiscus radiatus ccmp310 (KC509521) 115474 115401 - Ala TGC [ENA] ¡û
>CHL1810059389 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 65548 65621 + Ala TGC [ENA] ¡û
>CHL1810059392 MG755799 Stramenopiles Actinocyclus subtilis (MG755799) 112613 112540 - Ala TGC [ENA] ¡û
Identical group No.541126 (2 seq.)
>CHL090300001 AY217738 Alveolata Eimeria tenella 32837 32909 + Ala TGC [ENA] ¡û
>CHL090300002 AY217738 Alveolata Eimeria tenella 1885 1813 - Ala TGC [ENA] ¡û
Identical group No.629584 (2 seq.)
>CHL090103201 U87145 Alveolata Toxoplasma gondii 33130 33202 + Ala TGC [ENA] ¡û
>CHL090103209 U87145 Alveolata Toxoplasma gondii 1867 1795 - Ala TGC [ENA] ¡û
Identical group No.770450 (1 seq.)
>CHL1810046767 LC008447 Alveolata Lepidodinium chlorophorum (LC008447) 10629 10700 + Ala TGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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