tRNA genes clustered and arranged according to each identical group

Aquificota

Anticodon = GCC

HIT: 16 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.460955 (5 seq.)
>C08010680 CP001080 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [CP001080] 400702 400775 + Gly GCC [Ensembl] ¡û
>W09107743 ABLS01000097 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [ABLS] 14 87 + Gly GCC [ENA] ¡û
>W09114564 ABZS01000064 Aquificota Sulfurihydrogenibium yellowstonense SS-5 [ABZS] 1800 1727 - Gly GCC [ENA] ¡û
>ENV09004188 ADKJ01001378 Hot springs metagenome ctg_1106445192081 1041 1114 + Gly GCC [ENA] ¡û
>ENV09004225 ADKK01000213 Hot springs metagenome ctg_1106445177583 6118 6191 + Gly GCC [ENA] ¡û
Identical group No.487046 (14 seq.)
>W131217751 ATXC01000001 Aquificota Desulfurobacterium sp. TC5-1 [ATXC] 1406428 1406503 + Gly GCC [ENA] ¡û
>W131217753 ATXC01000001 Aquificota Desulfurobacterium sp. TC5-1 [ATXC] 1436885 1436960 + Gly GCC [ENA] ¡û
>W1711589798 MOEN01000030 Aquificota Desulfurobacterium indicum K6013 [MOEN] 7901 7976 + Gly GCC [ENA] ¡û
>W1711589800 MOEN01000040 Aquificota Desulfurobacterium indicum K6013 [MOEN] 315 240 - Gly GCC [ENA] ¡û
>WENV180275377 OBHT01017104 [OBHT] metagenome; hydrothermal vent 249 174 - Gly GCC [ENA] ¢þ
>WENV180287708 OBIL01000698 [OBIL] metagenome; hydrothermal vent 112 37 - Gly GCC [ENA] ¢þ
>WENV181212827 OFBU01000276 [OFBU] metagenome; hydrothermal vent 6274 6349 + Gly GCC [ENA] ¢þ
>WENV181213409 OFBV01001705 [OFBV] metagenome; hydrothermal vent 1967 2042 + Gly GCC [ENA] ¢þ
>WENV181213930 OFBW01002822 [OFBW] metagenome; hydrothermal vent 1398 1473 + Gly GCC [ENA] ¢þ
>WENV181214448 OFBY01000252 [OFBY] metagenome; hydrothermal vent 6230 6305 + Gly GCC [ENA] ¢þ
>WENV181215017 OFBZ01001060 [OFBZ] metagenome; hydrothermal vent 943 868 - Gly GCC [ENA] ¢þ
>WENV181215441 OFCA01000291 [OFCA] metagenome; hydrothermal vent 204 129 - Gly GCC [ENA] ¢þ
>WENV181215940 OFCB01000248 [OFCB] metagenome; hydrothermal vent 287 212 - Gly GCC [ENA] ¢þ
>C11122343 CP002444 Aquificota Thermovibrio ammonificans HB-1 [CP002444] 1596680 1596605 - Gly GCC [Ensembl] ¡û
Identical group No.516534 (7 seq.)
>WENV180275314 OBHT01004761 [OBHT] metagenome; hydrothermal vent 356 281 - Gly GCC [ENA] ¢þ
>WENV181212853 OFBU01000475 [OFBU] metagenome; hydrothermal vent 3062 3137 + Gly GCC [ENA] ¢þ
>WENV181213504 OFBV01005501 [OFBV] metagenome; hydrothermal vent 159 234 + Gly GCC [ENA] ¢þ
>WENV181214768 OFBY01014634 [OFBY] metagenome; hydrothermal vent 631 556 - Gly GCC [ENA] ¢þ
>W1910547786 FZOB01000005 Aquificota Desulfurobacterium atlanticum DSM 15668 [FZOB] 31408 31333 - Gly GCC [ENA] ¡û
>W1910547788 FZOB01000005 Aquificota Desulfurobacterium atlanticum DSM 15668 [FZOB] 243 168 - Gly GCC [ENA] ¡û
>C11107399 CP002543 Aquificota Desulfurobacterium thermolithotrophum DSM 11699 [CP002543] 1434714 1434789 + Gly GCC [Ensembl] ¡û
Identical group No.540932 (1 seq.)
>W08004353 ABHJ01000115 Aquificota Hydrogenivirga sp. 128-5-R1-1 [ABHJ] 2173 2101 - Gly GCC [ENA] ¡û
Identical group No.541895 (2 seq.)
>W141734181 JNLJ01000005 Aquificota Persephonella sp. IF05-L8 [JNLJ] 253780 253855 + Gly GCC [ENA] ¡û
>W141734268 JNLL01000001 Aquificota Persephonella sp. KM09-Lau-8 [JNLL] 946016 945941 - Gly GCC [ENA] ¡û
Identical group No.575338 (1 seq.)
>C11107404 CP002543 Aquificota Desulfurobacterium thermolithotrophum DSM 11699 [CP002543] 1427760 1427685 - Gly GCC [Ensembl] ¡û
Identical group No.582445 (1 seq.)
>W1911493095 OBEI01000001 Aquificota Persephonella hydrogeniphila DSM 15103 [OBEI] 526126 526201 + Gly GCC [ENA] ¡û
Identical group No.604508 (1 seq.)
>C09108607 CP001230 Aquificota Persephonella marina EX-H1 [CP001230] 1555094 1555019 - Gly GCC [Ensembl] ¡û
Identical group No.606250 (2 seq.)
>WENV181211116 OFBJ01009741 [OFBJ] metagenome; hydrothermal vent 421 346 - Gly GCC [ENA] ¢þ
>C11122334 CP002444 Aquificota Thermovibrio ammonificans HB-1 [CP002444] 1603881 1603956 + Gly GCC [Ensembl] ¡û
Identical group No.614158 (2 seq.)
>W141557062 JHUV01000008 Aquificota Sulfurihydrogenibium subterraneum DSM 15120 [JHUV] 61050 60977 - Gly GCC [ENA] ¡û
>C09109118 CP001229 Aquificota Sulfurihydrogenibium azorense Az-Fu1 [CP001229] 799206 799133 - Gly GCC [Ensembl] ¡û
Identical group No.658375 (10 seq.)
>WENV181228611 OFEH01000420 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 8186 8260 + Gly GCC [ENA] ¢þ
>WENV181407396 OGCG01023136 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 868 942 + Gly GCC [ENA] ¢þ
>C08005605 CP001130 Aquificota Hydrogenobaculum sp. Y04AAS1 [CP001130] 434624 434553 - Gly GCC [Ensembl] ¡û
>W09107155 ABFI01000059 Aquificota Hydrogenobaculum sp. Y04AAS1 [ABFI] 1529 1603 + Gly GCC [ENA] ¡û
>C151003674 CP002726 Aquificota Hydrogenobaculum sp. 3684 [CP002726] 418652 418578 - Gly GCC [Ensembl] ¡û
>C151003718 CP002809 Aquificota Hydrogenobaculum sp. SHO [CP002809] 418688 418614 - Gly GCC [Ensembl] ¡û
>W10115195 ADJO01000003 Aquificota Hydrogenobaculum sp. SN [ADJO] 6734 6660 - Gly GCC [ENA] ¡û
>W11118781 ADJO01000003 Aquificota Hydrogenobaculum sp. SN [ADJO] 6734 6660 - Gly GCC [ENA] ¡û
>C131013413 CP004347 Aquificota Hydrogenobaculum sp. HO [CP004347] 418680 418606 - Gly GCC [Ensembl] ¡û
>C131013725 CP004390 Aquificota Hydrogenobaculum sp. SN [CP004390] 418646 418572 - Gly GCC [Ensembl] ¡û
Identical group No.663971 (10 seq.)
>W1711246279 LYJL01000219 Gammaproteobacteria Acinetobacter baumannii [LYJL] 110 183 + Gly GCC [ENA] ¡û
>WENV181229107 OFEJ01000372 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 8093 8021 - Gly GCC [ENA] ¢þ
>WENV181404602 OGCA01022303 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 73 -1 - Gly GCC [ENA] ¢þ
>WENV181405086 OGCB01011096 [OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA 920 992 + Gly GCC [ENA] ¢þ
>WENV181407601 OGCG01048990 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 456 384 - Gly GCC [ENA] ¢þ
>WENV181408073 OGCH01000495 [OGCH] hot springs metagenome; hot springs 14764 14691 - Gly GCC [ENA] ¢þ
>WENV181408812 OGCH01015544 [OGCH] hot springs metagenome; hot springs 771 844 + Gly GCC [ENA] ¢þ
>W141730203 JNIE01000002 Aquificota Thermocrinis jamiesonii GBS [JNIE] 236901 236828 - Gly GCC [ENA] ¡û
>C141011703 CP007028 Aquificota Thermocrinis ruber DSM 23557 [CP007028] 659953 659881 - Gly GCC - ¡û
>C10113033 CP001931 Aquificota Thermocrinis albus DSM 14484 [CP001931] 1434394 1434322 - Gly GCC [Ensembl] ¡û
Identical group No.687966 (7 seq.)
>WENV181222927 OFDC01000679 [OFDC] hot springs metagenome; Water 10965 10893 - Gly GCC [ENA] ¢þ
>WENV181285388 OFGS01000100 [OFGS] hot springs metagenome; Water and soil 18234 18307 + Gly GCC [ENA] ¢þ
>WENV181408988 OGCH01030335 [OGCH] hot springs metagenome; hot springs 150 78 - Gly GCC [ENA] ¢þ
>WENV170574271 FLYM01019962 [FLYM] hot springs metagenome; Sediment 12367 12295 - Gly GCC [ENA] ¢þ
>W1911493335 OBEN01000001 Aquificota Hydrogenobacter hydrogenophilus DSM 2913 [OBEN] 213102 213176 + Gly GCC [ENA] ¡û
>C10107861 AP011112 Aquificota Hydrogenobacter thermophilus TK-6 [AP011112] 1254506 1254580 + Gly GCC - ¡û
>C11111334 CP002221 Aquificota Hydrogenobacter thermophilus TK-6 [CP002221] 1254365 1254439 + Gly GCC - ¡û
Identical group No.706579 (1 seq.)
>W08004357 ABHJ01000233 Aquificota Hydrogenivirga sp. 128-5-R1-1 [ABHJ] 698 772 + Gly GCC [ENA] ¡û
Identical group No.739516 (1 seq.)
>C161000098 AP013035 Aquificota Thermosulfidibacter takaii ABI70S6 [AP013035] 1336090 1336016 - Gly GCC [Ensembl] ¡û
Identical group No.776483 (1 seq.)
>C000003 AE000657 Aquificota Aquifex aeolicus VF5 [AE000657] 217784 217858 + Gly GCC [Ensembl] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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