tRNA genes clustered and arranged according to each identical group

Aquificota

Anticodon = TAA

HIT: 16 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.88964 (4 seq.)
>WENV181228964 OFEJ01000007 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 73973 73888 - Leu TAA [ENA] ¢þ
>WENV181404959 OGCB01003651 [OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA 1086 1171 + Leu TAA [ENA] ¢þ
>WENV181405904 OGCE01010257 [OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA 727 812 + Leu TAA [ENA] ¢þ
>C141011700 CP007028 Aquificota Thermocrinis ruber DSM 23557 [CP007028] 1004492 1004407 - Leu TAA - ¡û
Identical group No.93811 (2 seq.)
>C10107855 AP011112 Aquificota Hydrogenobacter thermophilus TK-6 [AP011112] 881454 881540 + Leu TAA - ¡û
>C11111328 CP002221 Aquificota Hydrogenobacter thermophilus TK-6 [CP002221] 881446 881532 + Leu TAA - ¡û
Identical group No.100883 (2 seq.)
>WENV181408325 OGCH01001838 [OGCH] hot springs metagenome; hot springs 2664 2578 - Leu TAA [ENA] ¢þ
>W141730198 JNIE01000002 Aquificota Thermocrinis jamiesonii GBS [JNIE] 327203 327289 + Leu TAA [ENA] ¡û
Identical group No.104475 (1 seq.)
>C161000069 AP013035 Aquificota Thermosulfidibacter takaii ABI70S6 [AP013035] 262297 262383 + Leu TAA [Ensembl] ¡û
Identical group No.111723 (1 seq.)
>C000037 AE000657 Aquificota Aquifex aeolicus VF5 [AE000657] 601801 601714 - Leu TAA [Ensembl] ¡û
Identical group No.113980 (7 seq.)
>C08010699 CP001080 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [CP001080] 830834 830751 - Leu TAA [Ensembl] ¡û
>W141557057 JHUV01000008 Aquificota Sulfurihydrogenibium subterraneum DSM 15120 [JHUV] 430323 430237 - Leu TAA [ENA] ¡û
>W09107729 ABLS01000030 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [ABLS] 4393 4307 - Leu TAA [ENA] ¡û
>W09114577 ABZS01000204 Aquificota Sulfurihydrogenibium yellowstonense SS-5 [ABZS] 2343 2257 - Leu TAA [ENA] ¡û
>C09109097 CP001229 Aquificota Sulfurihydrogenibium azorense Az-Fu1 [CP001229] 377582 377668 + Leu TAA [Ensembl] ¡û
>ENV09004155 ADKJ01000250 Hot springs metagenome ctg_1106445192081 634 720 + Leu TAA [ENA] ¡û
>ENV09004222 ADKK01000200 Hot springs metagenome ctg_1106445177583 3592 3506 - Leu TAA [ENA] ¡û
Identical group No.118933 (3 seq.)
>W131217774 ATXC01000002 Aquificota Desulfurobacterium sp. TC5-1 [ATXC] 93670 93584 - Leu TAA [ENA] ¡û
>W1711589772 MOEN01000007 Aquificota Desulfurobacterium indicum K6013 [MOEN] 23751 23837 + Leu TAA [ENA] ¡û
>W1910547809 FZOB01000020 Aquificota Desulfurobacterium atlanticum DSM 15668 [FZOB] 348 434 + Leu TAA [ENA] ¡û
Identical group No.124905 (5 seq.)
>WENV180288071 OBIL01043378 [OBIL] metagenome; hydrothermal vent 168 82 - Leu TAA [ENA] ¢þ
>WENV180581917 OCML01026295 [OCML] metagenome; diffuse fluid 282 196 - Leu TAA [ENA] ¢þ
>WENV181212797 OFBU01000114 [OFBU] metagenome; hydrothermal vent 6875 6961 + Leu TAA [ENA] ¢þ
>WENV181213610 OFBV01012929 [OFBV] metagenome; hydrothermal vent 440 354 - Leu TAA [ENA] ¢þ
>C11107406 CP002543 Aquificota Desulfurobacterium thermolithotrophum DSM 11699 [CP002543] 1119680 1119594 - Leu TAA [Ensembl] ¡û
Identical group No.130195 (1 seq.)
>W08004335 ABHJ01000006 Aquificota Hydrogenivirga sp. 128-5-R1-1 [ABHJ] 158340 158423 + Leu TAA [ENA] ¡û
Identical group No.130200 (3 seq.)
>W08004362 ABHJ01000401 Aquificota Hydrogenivirga sp. 128-5-R1-1 [ABHJ] 758 675 - Leu TAA [ENA] ¡û
>W141734146 JNLJ01000001 Aquificota Persephonella sp. IF05-L8 [JNLJ] 166682 166768 + Leu TAA [ENA] ¡û
>W141734275 JNLL01000001 Aquificota Persephonella sp. KM09-Lau-8 [JNLL] 152212 152126 - Leu TAA [ENA] ¡û
Identical group No.138705 (1 seq.)
>W1911493125 OBEI01000013 Aquificota Persephonella hydrogeniphila DSM 15103 [OBEI] 12399 12485 + Leu TAA [ENA] ¡û
Identical group No.143265 (1 seq.)
>C09108616 CP001230 Aquificota Persephonella marina EX-H1 [CP001230] 227808 227722 - Leu TAA [Ensembl] ¡û
Identical group No.144884 (1 seq.)
>W1911493356 OBEN01000002 Aquificota Hydrogenobacter hydrogenophilus DSM 2913 [OBEN] 52035 51950 - Leu TAA [ENA] ¡û
Identical group No.145384 (1 seq.)
>C10113059 CP001931 Aquificota Thermocrinis albus DSM 14484 [CP001931] 519285 519202 - Leu TAA [Ensembl] ¡û
Identical group No.152660 (1 seq.)
>C11122321 CP002444 Aquificota Thermovibrio ammonificans HB-1 [CP002444] 300092 300178 + Leu TAA [Ensembl] ¡û
Identical group No.154721 (10 seq.)
>WENV181228556 OFEH01000192 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 19348 19266 - Leu TAA [ENA] ¢þ
>WENV181407594 OGCG01046212 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 674 592 - Leu TAA [ENA] ¢þ
>C08005601 CP001130 Aquificota Hydrogenobaculum sp. Y04AAS1 [CP001130] 617429 617347 - Leu TAA [Ensembl] ¡û
>W09107136 ABFI01000012 Aquificota Hydrogenobaculum sp. Y04AAS1 [ABFI] 6335 6253 - Leu TAA [ENA] ¡û
>C151003670 CP002726 Aquificota Hydrogenobaculum sp. 3684 [CP002726] 620178 620096 - Leu TAA [Ensembl] ¡û
>C151003714 CP002809 Aquificota Hydrogenobaculum sp. SHO [CP002809] 620233 620151 - Leu TAA [Ensembl] ¡û
>W10115204 ADJO01000006 Aquificota Hydrogenobaculum sp. SN [ADJO] 45637 45555 - Leu TAA [ENA] ¡û
>W11118790 ADJO01000006 Aquificota Hydrogenobaculum sp. SN [ADJO] 45637 45555 - Leu TAA [ENA] ¡û
>C131013409 CP004347 Aquificota Hydrogenobaculum sp. HO [CP004347] 620206 620124 - Leu TAA [Ensembl] ¡û
>C131013721 CP004390 Aquificota Hydrogenobaculum sp. SN [CP004390] 620173 620091 - Leu TAA [Ensembl] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK