tRNA genes clustered and arranged according to each identical group

Aquificota

Anticodon = TTT

HIT: 19 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.288087 (9 seq.)
>WENV181228997 OFEJ01000034 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 2774 2701 - Lys TTT [ENA] ¢þ
>WENV181285390 OFGS01000100 [OFGS] hot springs metagenome; Water and soil 8273 8200 - Lys TTT [ENA] ¢þ
>WENV181404551 OGCA01013224 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 76 2 - Lys TTT [ENA] ¢þ
>WENV181404604 OGCA01022488 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 327 253 - Lys TTT [ENA] ¢þ
>WENV181404967 OGCB01004010 [OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA 1922 1996 + Lys TTT [ENA] ¢þ
>WENV181405827 OGCE01005018 [OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA 2453 2526 + Lys TTT [ENA] ¢þ
>WENV181408183 OGCH01000907 [OGCH] hot springs metagenome; hot springs 4372 4298 - Lys TTT [ENA] ¢þ
>W141730207 JNIE01000003 Aquificota Thermocrinis jamiesonii GBS [JNIE] 146655 146581 - Lys TTT [ENA] ¡û
>C141011699 CP007028 Aquificota Thermocrinis ruber DSM 23557 [CP007028] 1057752 1057678 - Lys TTT - ¡û
Identical group No.324212 (2 seq.)
>C10107852 AP011112 Aquificota Hydrogenobacter thermophilus TK-6 [AP011112] 808245 808319 + Lys TTT - ¡û
>C11111325 CP002221 Aquificota Hydrogenobacter thermophilus TK-6 [CP002221] 808236 808310 + Lys TTT - ¡û
Identical group No.414793 (1 seq.)
>W1911493367 OBEN01000007 Aquificota Hydrogenobacter hydrogenophilus DSM 2913 [OBEN] 56427 56353 - Lys TTT [ENA] ¡û
Identical group No.417164 (1 seq.)
>C10113029 CP001931 Aquificota Thermocrinis albus DSM 14484 [CP001931] 1288211 1288284 + Lys TTT [Ensembl] ¡û
Identical group No.460920 (10 seq.)
>WENV181228650 OFEH01000734 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 9039 8967 - Lys TTT [ENA] ¢þ
>WENV181407578 OGCG01043980 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 370 298 - Lys TTT [ENA] ¢þ
>C08005580 CP001130 Aquificota Hydrogenobaculum sp. Y04AAS1 [CP001130] 626939 627011 + Lys TTT [Ensembl] ¡û
>W09107135 ABFI01000012 Aquificota Hydrogenobaculum sp. Y04AAS1 [ABFI] 15845 15917 + Lys TTT [ENA] ¡û
>C151003649 CP002726 Aquificota Hydrogenobaculum sp. 3684 [CP002726] 626081 626153 + Lys TTT [Ensembl] ¡û
>C151003693 CP002809 Aquificota Hydrogenobaculum sp. SHO [CP002809] 626136 626208 + Lys TTT [Ensembl] ¡û
>W10115202 ADJO01000006 Aquificota Hydrogenobaculum sp. SN [ADJO] 51540 51612 + Lys TTT [ENA] ¡û
>W11118788 ADJO01000006 Aquificota Hydrogenobaculum sp. SN [ADJO] 51540 51612 + Lys TTT [ENA] ¡û
>C131013389 CP004347 Aquificota Hydrogenobaculum sp. HO [CP004347] 626109 626181 + Lys TTT [Ensembl] ¡û
>C131013700 CP004390 Aquificota Hydrogenobaculum sp. SN [CP004390] 626076 626148 + Lys TTT [Ensembl] ¡û
Identical group No.460931 (9 seq.)
>C08010713 CP001080 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [CP001080] 52424 52351 - Lys TTT [Ensembl] ¡û
>W141557049 JHUV01000008 Aquificota Sulfurihydrogenibium subterraneum DSM 15120 [JHUV] 103516 103589 + Lys TTT [ENA] ¡û
>W141557068 JHUV01000009 Aquificota Sulfurihydrogenibium subterraneum DSM 15120 [JHUV] 187120 187047 - Lys TTT [ENA] ¡û
>W09107718 ABLS01000004 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [ABLS] 12212 12285 + Lys TTT [ENA] ¡û
>W09114575 ABZS01000190 Aquificota Sulfurihydrogenibium yellowstonense SS-5 [ABZS] 462 535 + Lys TTT [ENA] ¡û
>C09109108 CP001229 Aquificota Sulfurihydrogenibium azorense Az-Fu1 [CP001229] 1423464 1423537 + Lys TTT [Ensembl] ¡û
>C09109119 CP001229 Aquificota Sulfurihydrogenibium azorense Az-Fu1 [CP001229] 703945 703872 - Lys TTT [Ensembl] ¡û
>ENV09004202 ADKJ01001595 Hot springs metagenome ctg_1106445192081 4958 4885 - Lys TTT [ENA] ¡û
>ENV09004211 ADKK01000159 Hot springs metagenome ctg_1106445177583 356 429 + Lys TTT [ENA] ¡û
Identical group No.487042 (7 seq.)
>W131217759 ATXC01000001 Aquificota Desulfurobacterium sp. TC5-1 [ATXC] 1040278 1040203 - Lys TTT [ENA] ¡û
>W131217768 ATXC01000001 Aquificota Desulfurobacterium sp. TC5-1 [ATXC] 7786 7711 - Lys TTT [ENA] ¡û
>W1711589779 MOEN01000012 Aquificota Desulfurobacterium indicum K6013 [MOEN] 22504 22579 + Lys TTT [ENA] ¡û
>W1711589803 MOEN01000045 Aquificota Desulfurobacterium indicum K6013 [MOEN] 4561 4486 - Lys TTT [ENA] ¡û
>WENV180582039 OCML01067063 [OCML] metagenome; diffuse fluid 82 157 + Lys TTT [ENA] ¢þ
>WENV181211183 OFBJ01017192 [OFBJ] metagenome; hydrothermal vent 435 510 + Lys TTT [ENA] ¢þ
>C11107374 CP002543 Aquificota Desulfurobacterium thermolithotrophum DSM 11699 [CP002543] 310679 310754 + Lys TTT [Ensembl] ¡û
Identical group No.516514 (7 seq.)
>WENV180275591 OBHT01075933 [OBHT] metagenome; hydrothermal vent 28 103 + Lys TTT [ENA] ¢þ
>WENV180288455 OBIL01180250 [OBIL] metagenome; hydrothermal vent 68 143 + Lys TTT [ENA] ¢þ
>WENV180648289 OCSI01156566 [OCSI] metagenome; diffuse fluid 88 13 - Lys TTT [ENA] ¢þ
>WENV181211534 OFBK01016874 [OFBK] metagenome; hydrothermal vent 357 432 + Lys TTT [ENA] ¢þ
>WENV181213094 OFBU01009454 [OFBU] metagenome; hydrothermal vent 837 912 + Lys TTT [ENA] ¢þ
>WENV181228269 OFDO01006924 [OFDO] metagenome; hydrothermal vent 962 887 - Lys TTT [ENA] ¢þ
>C11122328 CP002444 Aquificota Thermovibrio ammonificans HB-1 [CP002444] 1298267 1298342 + Lys TTT [Ensembl] ¡û
Identical group No.540934 (1 seq.)
>W08004310 ABHJ01000001 Aquificota Hydrogenivirga sp. 128-5-R1-1 [ABHJ] 90482 90555 + Lys TTT [ENA] ¡û
Identical group No.540935 (1 seq.)
>W08004355 ABHJ01000168 Aquificota Hydrogenivirga sp. 128-5-R1-1 [ABHJ] 811 884 + Lys TTT [ENA] ¡û
Identical group No.541138 (4 seq.)
>C08010682 CP001080 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [CP001080] 700476 700551 + Lys TTT [Ensembl] ¡û
>W09107716 ABLS01000003 Aquificota Sulfurihydrogenibium sp. YO3AOP1 [ABLS] 17538 17613 + Lys TTT [ENA] ¡û
>ENV09004171 ADKJ01000722 Hot springs metagenome ctg_1106445192081 3312 3387 + Lys TTT [ENA] ¡û
>ENV09004230 ADKK01000224 Hot springs metagenome ctg_1106445177583 999 1074 + Lys TTT [ENA] ¡û
Identical group No.541885 (6 seq.)
>W141734154 JNLJ01000001 Aquificota Persephonella sp. IF05-L8 [JNLJ] 804069 804144 + Lys TTT [ENA] ¡û
>W141734157 JNLJ01000001 Aquificota Persephonella sp. IF05-L8 [JNLJ] 868667 868592 - Lys TTT [ENA] ¡û
>W141734242 JNLL01000001 Aquificota Persephonella sp. KM09-Lau-8 [JNLL] 1257960 1258035 + Lys TTT [ENA] ¡û
>W141734255 JNLL01000001 Aquificota Persephonella sp. KM09-Lau-8 [JNLL] 1796858 1796933 + Lys TTT [ENA] ¡û
>W1911493116 OBEI01000011 Aquificota Persephonella hydrogeniphila DSM 15103 [OBEI] 32210 32135 - Lys TTT [ENA] ¡û
>W1911493118 OBEI01000012 Aquificota Persephonella hydrogeniphila DSM 15103 [OBEI] 148 223 + Lys TTT [ENA] ¡û
Identical group No.561790 (1 seq.)
>W1910547778 FZOB01000003 Aquificota Desulfurobacterium atlanticum DSM 15668 [FZOB] 8079 8004 - Lys TTT [ENA] ¡û
Identical group No.561792 (1 seq.)
>W1910547797 FZOB01000011 Aquificota Desulfurobacterium atlanticum DSM 15668 [FZOB] 53400 53325 - Lys TTT [ENA] ¡û
Identical group No.575339 (2 seq.)
>WENV181225049 OFDH01002496 [OFDH] metagenome; hydrothermal vent 521 446 - Lys TTT [ENA] ¢þ
>C11107410 CP002543 Aquificota Desulfurobacterium thermolithotrophum DSM 11699 [CP002543] 705266 705191 - Lys TTT [Ensembl] ¡û
Identical group No.593822 (1 seq.)
>C161000096 AP013035 Aquificota Thermosulfidibacter takaii ABI70S6 [AP013035] 1398689 1398616 - Lys TTT [Ensembl] ¡û
Identical group No.604512 (2 seq.)
>C09108585 CP001230 Aquificota Persephonella marina EX-H1 [CP001230] 1120033 1120106 + Lys TTT [Ensembl] ¡û
>C09108612 CP001230 Aquificota Persephonella marina EX-H1 [CP001230] 318106 318031 - Lys TTT [Ensembl] ¡û
Identical group No.648422 (1 seq.)
>C11122354 CP002444 Aquificota Thermovibrio ammonificans HB-1 [CP002444] 663184 663109 - Lys TTT [Ensembl] ¡û
Identical group No.648779 (1 seq.)
>C000022 AE000657 Aquificota Aquifex aeolicus VF5 [AE000657] 1515422 1515347 - Lys TTT [Ensembl] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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