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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Anticodon = TAC
HIT:
2 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.455351 (137 seq.)
>W1710925659
LODL01000002
Betaproteobacteria
Dechloromonas denitrificans [LODL]
76284
76359
+
Val
TAC
[ENA]
¡û
>W1711224646
LXUF01000001
Betaproteobacteria
Methylovorus sp. MM2 MM1 [LXUF]
1215614
1215689
+
Val
TAC
[ENA]
¡û
>W1711339972
MCAW01000001
Betaproteobacteria
Methylophilales bacterium LSUCC0135 [MCAW]
244019
244094
+
Val
TAC
[ENA]
¡û
>W1711385776
MEEO01000324
Betaproteobacteria
Nitrosomonadales bacterium SCN 54-20 [MEEO]
5786
5711
-
Val
TAC
[ENA]
¡û
>W1711421780
MHZV01000001
Betaproteobacteria
Rhodocyclales bacterium GWA2_65_19 [MHZV]
47205
47280
+
Val
TAC
[ENA]
¡û
>W1711505607
MKVR01000050
Betaproteobacteria
Nitrosospira sp. 56-18 [MKVR]
16849
16774
-
Val
TAC
[ENA]
¡û
>W1711718058
MTHD01000002
Betaproteobacteria
Azonexus hydrophilus [MTHD]
792374
792449
+
Val
TAC
[ENA]
¡û
>W131050741
AMXB01000001
Betaproteobacteria
Thauera sp. 27 [AMXB]
232947
233022
+
Val
TAC
[ENA]
¡û
>W131050813
AMXC01000005
Betaproteobacteria
Thauera sp. 63 [AMXC]
80740
80665
-
Val
TAC
[ENA]
¡û
>W131050947
AMXE01000100
Betaproteobacteria
Thauera linaloolentis 47Lol = DSM 12138 [AMXE]
2595
2520
-
Val
TAC
[ENA]
¡û
>W131164442
ARAT01000141
Betaproteobacteria
Gallionella sp. SCGC AAA018-N21 [ARAT]
28369
28294
-
Val
TAC
[ENA]
¡û
>W131176256
ARJX01000027
Betaproteobacteria
Aromatoleum toluclasticum ATCC 700605 [ARJX]
23003
22928
-
Val
TAC
[ENA]
¡û
>W131223594
AUCE01000016
Betaproteobacteria
Azonexus hydrophilus DSM 23864 [AUCE]
131506
131431
-
Val
TAC
[ENA]
¡û
>W131223767
AUCH01000013
Betaproteobacteria
Azovibrio restrictus DSM 23866 [AUCH]
121975
121900
-
Val
TAC
[ENA]
¡û
>W131249844
CAUA01000078
Betaproteobacteria
Nitrosospira lacus APG3 [CAUA]
68527
68602
+
Val
TAC
[ENA]
¡û
>C001317
AM406670
Betaproteobacteria
Azoarcus olearius BH72 [AM406670]
2269493
2269418
-
Val
TAC
[Ensembl]
¡û
>C013383
CP000284
Betaproteobacteria
Methylobacillus flagellatus KT [CP000284]
1520423
1520498
+
Val
TAC
[Ensembl]
¡û
>C015163
CP000103
Betaproteobacteria
Nitrosospira multiformis ATCC 25196 [CP000103]
2662742
2662667
-
Val
TAC
[Ensembl]
¡û
>WENV016702
AACY020468593
Marine microbial communities from Global Ocean Sampling (GOS)
1966
2043
+
Val
TAC
[ENA]
>WENV180101292
OAOU01019262
[OAOU] marine metagenome; ENVO:00002010 SEAWATER
478
553
+
Val
TAC
[ENA]
¢þ
>WENV180252329
OBEQ010440974
[OBEQ] groundwater metagenome; groundwater
456
381
-
Val
TAC
[ENA]
¢þ
>WENV180295981
OBIZ01510528
[OBIZ] soil metagenome; soil
127
52
-
Val
TAC
[ENA]
¢þ
>WENV180299431
OBJC01007578
[OBJC] metagenome; water
393
318
-
Val
TAC
[ENA]
¢þ
>WENV180320853
OBKQ01036212
[OBKQ] soil metagenome; Clay
295
220
-
Val
TAC
[ENA]
¢þ
>WENV180392766
OBPP01008732
[OBPP] marine metagenome; ENVO:00002042
264
339
+
Val
TAC
[ENA]
¢þ
>WENV180393698
OBPR01001640
[OBPR] marine metagenome; ENVO:00002042
304
229
-
Val
TAC
[ENA]
¢þ
>WENV180581184
OCMH01051414
[OCMH] metagenome; diffuse fluid
75
150
+
Val
TAC
[ENA]
¢þ
>WENV180584050
OCNO01007498
[OCNO] soil metagenome; Clay
121
196
+
Val
TAC
[ENA]
¢þ
>WENV180591477
OCOV01026693
[OCOV] marine metagenome; ENVO:01000301
136
61
-
Val
TAC
[ENA]
¢þ
>WENV181120806
OEFK01065302
[OEFK] marine metagenome; ENVO:00002010 seawater
341
416
+
Val
TAC
[ENA]
¢þ
>WENV181293322
OFHG01001386
[OFHG] soil metagenome; Clay
3450
3375
-
Val
TAC
[ENA]
¢þ
>WENV181294183
OFHG01095599
[OFHG] soil metagenome; Clay
440
515
+
Val
TAC
[ENA]
¢þ
>WENV181311095
OFJB01000015
[OFJB] sludge metagenome; sludge
134379
134454
+
Val
TAC
[ENA]
¢þ
>WENV181367336
OFQA01000272
[OFQA] freshwater metagenome; Freshwater Lake
560
485
-
Val
TAC
[ENA]
¢þ
>WENV181368500
OFQL01011913
[OFQL] freshwater metagenome; Freshwater Lake
453
528
+
Val
TAC
[ENA]
¢þ
>WENV181369041
OFQN01013163
[OFQN] freshwater metagenome; Freshwater Lake
135
60
-
Val
TAC
[ENA]
¢þ
>WENV181377121
OFRA01002719
[OFRA] wastewater metagenome; Lake Maggiore Verbania
3306
3231
-
Val
TAC
[ENA]
¢þ
>WENV181378645
OFRB01042761
[OFRB] wastewater metagenome; Exp Tend CN 0WW
435
510
+
Val
TAC
[ENA]
¢þ
>WENV181379685
OFRD01005983
[OFRD] wastewater metagenome; Exp Tend CN 100WW
2416
2491
+
Val
TAC
[ENA]
¢þ
>WENV181386459
OFRL01004466
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
504
429
-
Val
TAC
[ENA]
¢þ
>WENV181400188
OFSF01002131
[OFSF] wastewater metagenome; Exp Tend VB 100WW
171
96
-
Val
TAC
[ENA]
¢þ
>WENV181414345
OGCL01000257
[OGCL] hot springs metagenome; Hot spring water
56691
56616
-
Val
TAC
[ENA]
¢þ
>WENV181415674
OGCL01018566
[OGCL] hot springs metagenome; Hot spring water
328
403
+
Val
TAC
[ENA]
¢þ
>W141229521
BAMT01000001
Betaproteobacteria
Methylobacillus glycogenes JCM 2850 [BAMT]
373971
374046
+
Val
TAC
[ENA]
¡û
>W141229523
BAMT01000001
Betaproteobacteria
Methylobacillus glycogenes JCM 2850 [BAMT]
526815
526890
+
Val
TAC
[ENA]
¡û
>W141277632
JAET01000001
Betaproteobacteria
Dechloromonas agitata is5 [JAET]
2376220
2376145
-
Val
TAC
[ENA]
¡û
>WENV183661408
ORJL010106668
[ORJL] groundwater metagenome; groundwater
1962
1887
-
Val
TAC
[ENA]
¢þ
>WENV183665309
ORJL010456259
[ORJL] groundwater metagenome; groundwater
2150
2225
+
Val
TAC
[ENA]
¢þ
>WENV183680716
ORMF010214809
[ORMF] groundwater metagenome; groundwater
7690
7615
-
Val
TAC
[ENA]
¢þ
>WENV183684301
ORMF010691994
[ORMF] groundwater metagenome; groundwater
15814
15739
-
Val
TAC
[ENA]
¢þ
>WENV183726820
PJTO01000206
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
43501
43576
+
Val
TAC
[ENA]
¢þ
>WENV183726859
PJTO01000294
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
11275
11350
+
Val
TAC
[ENA]
¢þ
>WENV183729207
PJTQ01011310
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
666
591
-
Val
TAC
[ENA]
¢þ
>WENV183729315
PJTQ01021284
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
1
76
+
Val
TAC
[ENA]
¢þ
>WENV183736703
PJUD01000003
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
328424
328499
+
Val
TAC
[ENA]
¢þ
>WENV183736705
PJUD01000003
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
500298
500373
+
Val
TAC
[ENA]
¢þ
>WENV183740622
PJUF01004581
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
2988
2913
-
Val
TAC
[ENA]
¢þ
>WENV183740835
PJUF01012684
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
1536
1611
+
Val
TAC
[ENA]
¢þ
>WENV170000161
AERA01018516
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
458
533
+
Val
TAC
[ENA]
¢þ
>WENV170009964
APMI01005971
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
29790
29865
+
Val
TAC
[ENA]
¢þ
>WENV170561123
CZCA01003091
[CZCA] anaerobic digester metagenome; anaerobic digester
628
703
+
Val
TAC
[ENA]
¢þ
>WENV170570858
FLOH01000030
[FLOH] marine metagenome; water
32653
32728
+
Val
TAC
[ENA]
¢þ
>WENV170571800
FLOH01000307
[FLOH] marine metagenome; water
9321
9396
+
Val
TAC
[ENA]
¢þ
>WENV170572077
FLOH01000513
[FLOH] marine metagenome; water
77576
77501
-
Val
TAC
[ENA]
¢þ
>WENV170601250
FUWD010163754
[FUWD] metagenome; unknown
325
400
+
Val
TAC
[ENA]
¢þ
>WENV170606513
FUWD010677028
[FUWD] metagenome; unknown
386
311
-
Val
TAC
[ENA]
¢þ
>WENV170650191
JRYD01020206
[JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO
497
422
-
Val
TAC
[ENA]
¢þ
>WENV170652655
JRYH01011791
[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
1346
1421
+
Val
TAC
[ENA]
¢þ
>WENV170653241
JRYI01030513
[JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO
579
504
-
Val
TAC
[ENA]
¢þ
>WENV170654512
JRYL01000168
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
107937
108012
+
Val
TAC
[ENA]
¢þ
>WENV170654676
JRYL01004833
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
1986
2061
+
Val
TAC
[ENA]
¢þ
>WENV170654822
JRYL01028356
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
1613
1538
-
Val
TAC
[ENA]
¢þ
>WENV170657999
JTFP01042353
[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
196
121
-
Val
TAC
[ENA]
¢þ
>WENV170712113
LNFM01009842
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
7078
7153
+
Val
TAC
[ENA]
¢þ
>WENV170961655
MLJW01000360
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
18367
18442
+
Val
TAC
[ENA]
¢þ
>WENV002105
AACY020058683
Marine microbial communities from Global Ocean Sampling (GOS)
3581
3658
+
Val
TAC
[ENA]
>C181049336
CP021106
Betaproteobacteria
Nitrosospira lacus APG3 [CP021106]
17740
17665
-
Val
TAC
-
¡û
>C181060438
CP022187
Betaproteobacteria
Parazoarcus communis TSPY31 [CP022187]
1632230
1632155
-
Val
TAC
-
¡û
>C181060481
CP022188
Betaproteobacteria
Parazoarcus communis TSNA42 [CP022188]
4449024
4448949
-
Val
TAC
-
¡û
>C181121215
CP025682
Betaproteobacteria
Pseudazoarcus pumilus SY39 [CP025682]
1859153
1859078
-
Val
TAC
-
¡û
>C191022911
CP022958
Betaproteobacteria
Azoarcus sp. DD4 [CP022958]
2880613
2880538
-
Val
TAC
-
¡û
>W141558441
JHVX01000010
Betaproteobacteria
Nitrosospira briensis C-128 [JHVX]
18089
18014
-
Val
TAC
[ENA]
¡û
>W141561715
JHYR01000004
Betaproteobacteria
Thauera linaloolentis 47Lol = DSM 12138 [JHYR]
34558
34483
-
Val
TAC
[ENA]
¡û
>W1910228577
FNVK01000031
Betaproteobacteria
Nitrosospira multiformis ATCC 25196 Nl13 [FNVK]
11344
11419
+
Val
TAC
[ENA]
¡û
>W1910744069
MHZX01000026
Betaproteobacteria
Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24 [MHZX]
6541
6466
-
Val
TAC
[ENA]
¡û
>W1910828057
MWUM01000003
Betaproteobacteria
Zoogloea sp. LCSB751 [MWUM]
2508
2433
-
Val
TAC
[ENA]
¡û
>W1910942190
NJGG01000002
Betaproteobacteria
Polynucleobacter cosmopolitanus MWH-MoIso2 [NJGG]
22497
22422
-
Val
TAC
[ENA]
¡û
>C09107578
CP001674
Betaproteobacteria
Methylovorus glucosotrophus SIP3-4 [CP001674]
2607163
2607088
-
Val
TAC
[Ensembl]
¡û
>C09107585
CP001674
Betaproteobacteria
Methylovorus glucosotrophus SIP3-4 [CP001674]
1566656
1566581
-
Val
TAC
[Ensembl]
¡û
>W1911114356
NOIH01000008
Betaproteobacteria
Thauera propionica KNDSS-Mac4 [NOIH]
210207
210282
+
Val
TAC
[ENA]
¡û
>W1911496914
OCMZ01000001
Betaproteobacteria
Nitrosovibrio sp. Nv4 [OCMZ]
24699
24624
-
Val
TAC
[ENA]
¡û
>SRA1000078
SRR000286.10214
Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
85
10
-
Val
TAC
[SRA]
>W1810444913
PZKC01000006
Betaproteobacteria
Pseudothauera lacus D20 [PZKC]
42467
42392
-
Val
TAC
[ENA]
¡û
>W1810464074
QAAC01000003
Betaproteobacteria
Nitrosospira sp. Nsp6 [QAAC]
315403
315478
+
Val
TAC
[ENA]
¡û
>W1810476939
QAOK01000010
Betaproteobacteria
Nitrosospira multiformis Nl12 [QAOK]
17141
17066
-
Val
TAC
[ENA]
¡û
>W1810477261
QAOR01000003
Betaproteobacteria
Nitrosospira sp. Nsp5 [QAOR]
315403
315478
+
Val
TAC
[ENA]
¡û
>W1810477435
QAOU01000008
Betaproteobacteria
Nitrosospira sp. Nsp2 [QAOU]
17197
17122
-
Val
TAC
[ENA]
¡û
>W1810503418
QBKC01000004
Betaproteobacteria
Nitrosospira sp. Nsp37 [QBKC]
340820
340895
+
Val
TAC
[ENA]
¡û
>W1810696192
QLTB01000013
Betaproteobacteria
Nitrosospira multiformis Nl15 [QLTB]
16799
16724
-
Val
TAC
[ENA]
¡û
>W1810696240
QLTC01000021
Betaproteobacteria
Nitrosospira multiformis Nsp16 [QLTC]
17920
17995
+
Val
TAC
[ENA]
¡û
>W1810696274
QLTD01000004
Betaproteobacteria
Nitrosospira multiformis Nl8 [QLTD]
16795
16720
-
Val
TAC
[ENA]
¡û
>C151076210
CP011072
Betaproteobacteria
Azoarcus sp. CIB [CP011072]
3235964
3235889
-
Val
TAC
-
¡û
>C151094449
CP012371
Betaproteobacteria
Nitrosospira briensis C-128 [CP012371]
2336480
2336555
+
Val
TAC
-
¡û
>C151104261
LN827929
Betaproteobacteria
Candidatus Methylopumilus planktonicus MMS-10A-171 [LN827929]
770884
770809
-
Val
TAC
[Ensembl]
¡û
>W1510019305
BBWF01000010
Betaproteobacteria
Sulfuricella sp. T08 [BBWF]
54280
54205
-
Val
TAC
[ENA]
¡û
>WENV11100519
AERA01018516
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
458
533
+
Val
TAC
[ENA]
¡û
>C11114211
CP002252
Betaproteobacteria
Methylovorus sp. MP688 [CP002252]
2482048
2481973
-
Val
TAC
[Ensembl]
¡û
>C11114218
CP002252
Betaproteobacteria
Methylovorus sp. MP688 [CP002252]
1566682
1566607
-
Val
TAC
[Ensembl]
¡û
>W1511508766
JXQM01000008
Betaproteobacteria
Nitrosospira sp. NpAV [JXQM]
17384
17309
-
Val
TAC
[ENA]
¡û
>W1511686431
LFRJ01000003
Betaproteobacteria
Thauera humireducens SgZ-1 [LFRJ]
109401
109326
-
Val
TAC
[ENA]
¡û
>W11185931
CACR01001820
Betaproteobacteria
Thauera selenatis AX [CACR]
3774
3849
+
Val
TAC
[ENA]
¡û
>C161075125
CP014646
Betaproteobacteria
Thauera humireducens SgZ-1 [CP014646]
1276072
1275997
-
Val
TAC
[Ensembl]
¡û
>C161095105
CP016210
Betaproteobacteria
Azoarcus olearius DQS-4 [CP016210]
2342721
2342646
-
Val
TAC
-
¡û
>WENV059039
AACY023352087
Marine microbial communities from Global Ocean Sampling (GOS)
985
1062
+
Val
TAC
[ENA]
>W1610071681
BCUG01000004
Betaproteobacteria
Thauera butanivorans NBRC 103042 [BCUG]
116862
116787
-
Val
TAC
[ENA]
¡û
>WENV006992
AACY020182882
Marine microbial communities from Global Ocean Sampling (GOS)
1624
1547
-
Val
TAC
[ENA]
>W1610617622
LGUD01000042
Betaproteobacteria
Rhodocyclaceae bacterium Paddy-1 [LGUD]
237367
237442
+
Val
TAC
[ENA]
¡û
>W1610783305
LODL01000002
Betaproteobacteria
Dechloromonas denitrificans [LODL]
76284
76359
+
Val
TAC
[ENA]
¡û
>W1611008610
LXUF01000001
Betaproteobacteria
Methylovorus sp. MM2 MM1 [LXUF]
1215614
1215689
+
Val
TAC
[ENA]
¡û
>W1710068883
BCUG01000004
Betaproteobacteria
Thauera butanivorans NBRC 103042 [BCUG]
116862
116787
-
Val
TAC
[ENA]
¡û
>W1710505965
FMUF01000007
Betaproteobacteria
Nitrosospira sp. Nsp1 [FMUF]
17891
17816
-
Val
TAC
[ENA]
¡û
>W1710507298
FMVD01000011
Betaproteobacteria
Nitrosospira sp. Nsp13 [FMVD]
95950
96025
+
Val
TAC
[ENA]
¡û
>W1710507960
FMVQ01000021
Betaproteobacteria
Nitrosospira sp. Nl5 [FMVQ]
17156
17081
-
Val
TAC
[ENA]
¡û
>W1710509166
FMWY01000026
Betaproteobacteria
Nitrosospira sp. Nsp18 [FMWY]
28460
28535
+
Val
TAC
[ENA]
¡û
>W1710527369
FNKY01000001
Betaproteobacteria
Nitrosospira multiformis [FNKY]
16092
16017
-
Val
TAC
[ENA]
¡û
>W1710532603
FNQL01000009
Betaproteobacteria
Nitrosospira multiformis [FNQL]
110818
110893
+
Val
TAC
[ENA]
¡û
>W1710545199
FOBH01000006
Betaproteobacteria
Nitrosovibrio tenuis [FOBH]
148425
148500
+
Val
TAC
[ENA]
¡û
>W1710547236
FOCT01000008
Betaproteobacteria
Nitrosospira multiformis [FOCT]
16803
16728
-
Val
TAC
[ENA]
¡û
>W1710548605
FODX01000009
Betaproteobacteria
Nitrosovibrio sp. Nv6 [FODX]
52312
52387
+
Val
TAC
[ENA]
¡û
>W1710553116
FOHI01000003
Betaproteobacteria
Nitrosospira multiformis [FOHI]
404340
404415
+
Val
TAC
[ENA]
¡û
>W1710563647
FOPV01000018
Betaproteobacteria
Nitrosospira sp. Nsp14 [FOPV]
71069
71144
+
Val
TAC
[ENA]
¡û
>W1710570799
FOVJ01000010
Betaproteobacteria
Nitrosospira briensis [FOVJ]
45620
45695
+
Val
TAC
[ENA]
¡û
>W1710571494
FOVY01000015
Betaproteobacteria
Nitrosospira briensis [FOVY]
17813
17738
-
Val
TAC
[ENA]
¡û
>W1710578980
FPBZ01000016
Betaproteobacteria
Nitrosospira multiformis [FPBZ]
16811
16736
-
Val
TAC
[ENA]
¡û
>W1710591609
FRBV01000010
Betaproteobacteria
Nitrosospira sp. Nsp11 [FRBV]
18026
17951
-
Val
TAC
[ENA]
¡û
>W1710595731
FTMD01000003
Betaproteobacteria
Aromatoleum tolulyticum tolulyticus [FTMD]
25231
25156
-
Val
TAC
[ENA]
¡û
>W1710743172
LGUD01000042
Betaproteobacteria
Rhodocyclaceae bacterium Paddy-1 [LGUD]
237367
237442
+
Val
TAC
[ENA]
¡û
Identical group No.483716 (16 seq.)
>W1711438294
MIQH01000777
Gammaproteobacteria
Bathymodiolus thermophilus thioautotrophic gill symbiont [MIQH]
174
99
-
Val
TAC
[ENA]
¡û
>W1711438296
MIQH01000928
Gammaproteobacteria
Bathymodiolus thermophilus thioautotrophic gill symbiont [MIQH]
6791
6866
+
Val
TAC
[ENA]
¡û
>C007255
AP009247
Gammaproteobacteria
Candidatus Vesicomyosocius okutanii HA [AP009247]
628914
628839
-
Val
TAC
[Ensembl]
¡û
>WENV180399820
OBQO01046744
[OBQO] marine metagenome; ENVO:00002010
283
358
+
Val
TAC
[ENA]
¢þ
>WENV180590886
OCOU01027657
[OCOU] marine metagenome; Water
285
210
-
Val
TAC
[ENA]
¢þ
>WENV170575923
FPHU01000053
[FPHU] hydrothermal vent metagenome genome assembly, contig: NODE_233.; water
16366
16291
-
Val
TAC
[ENA]
¢þ
>WENV170575932
FPHU01000125
[FPHU] hydrothermal vent metagenome genome assembly, contig: NODE_233.; water
180
105
-
Val
TAC
[ENA]
¢þ
>WENV170576037
FPHY01000059
[FPHY] hydrothermal vent metagenome genome assembly, contig: NODE_87.; water
6609
6684
+
Val
TAC
[ENA]
¢þ
>WENV170576050
FPHZ01000037
[FPHZ] hydrothermal vent metagenome genome assembly, contig: NODE_182.; water
8256
8181
-
Val
TAC
[ENA]
¢þ
>WENV170576065
FPIA01000026
[FPIA] hydrothermal vent metagenome genome assembly, contig: NODE_20.; water
7135
7210
+
Val
TAC
[ENA]
¢þ
>WENV170615708
FUWD012865785
[FUWD] metagenome; unknown
724
649
-
Val
TAC
[ENA]
¢þ
>C191027367
CP024634
Gammaproteobacteria
Bathymodiolus thermophilus thioautotrophic gill symbiont EPR9N [CP024634]
992004
992079
+
Val
TAC
-
¡û
>SRA1000067
SRR000285.29990
Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
78
3
-
Val
TAC
[SRA]
>SRA1000075
SRR000285.47217
Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
78
3
-
Val
TAC
[SRA]
>W1510081316
CDSC01000044
Gammaproteobacteria
Bathymodiolus azoricus thioautotrophic gill symbiont thioautotrophic gill symbiont BazSymA [CDSC]
3353
3428
+
Val
TAC
[ENA]
¡û
>C161000122
AP013042
Gammaproteobacteria
endosymbiont of Bathymodiolus septemdierum str. Myojin knoll Myojin Knoll [AP013042]
482908
482983
+
Val
TAC
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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