tRNA genes clustered and arranged according to each identical group

Betaproteobacteria

Anticodon = TAA

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.67422 (2 seq.)
>W1711957369 NBTZ01000045 Betaproteobacteria Caballeronia sordidicola [NBTZ] 2678 2589 - Leu TAA [ENA] ¡û
>PL171000990 CP014310 Betaproteobacteria Burkholderia sp. PAMC 26561 plasmid:unnamed3 139308 139397 + Leu TAA [ENA] ¡û
Identical group No.205034 (2 seq.)
>PL171001489 CP021449 Betaproteobacteria Ralstonia solanacearum SEPPX05 plasmid:pSEPPX05 1066750 1066834 + Leu TAA [ENA] ¡û
>W1810235314 PPFC01001024 Betaproteobacteria Ralstonia solanacearum UTT-25 [PPFC] 16708 16624 - Leu TAA [ENA] ¡û
Identical group No.210190 (35 seq.)
>W1710876409 LMPF01000001 Betaproteobacteria Burkholderia sp. Leaf177 [LMPF] 584300 584216 - Leu TAA [ENA] ¡û
>W1711706660 MSRG01000091 Betaproteobacteria Caballeronia sordidicola [MSRG] 200706 200790 + Leu TAA [ENA] ¡û
>W1711957314 NBTY01000003 Betaproteobacteria Caballeronia sordidicola [NBTY] 169611 169695 + Leu TAA [ENA] ¡û
>W1711957389 NBTZ01000112 Betaproteobacteria Caballeronia sordidicola [NBTZ] 200907 200991 + Leu TAA [ENA] ¡û
>WENV180344587 OBLL01052748 [OBLL] soil metagenome; soil 32 116 + Leu TAA [ENA] ¡û
>W141727703 JNFG01000202 Betaproteobacteria Caballeronia sordidicola [JNFG] 92541 92457 - Leu TAA [ENA] ¡û
>W1910804569 MTHB01000275 Betaproteobacteria Caballeronia sordidicola PAMC 26633 [MTHB] 3327 3243 - Leu TAA [ENA] ¡û
>W1911498140 OCSX01000001 Betaproteobacteria Burkholderia sp. D7 [OCSX] 1635399 1635315 - Leu TAA [ENA] ¡û
>PL201000206 CP014505 Betaproteobacteria Burkholderia sp. PAMC 28687 plasmid: [CP014505] 1075772 1075688 - Leu TAA [Ensembl] ¡û
>W2010370265 CAHJWQ010000509 Betaproteobacteria Burkholderiaceae bacterium [CAHJWQ] 1744 1660 - Leu TAA [ENA] ¡û
>W2010781261 LMUF01000030 Betaproteobacteria Burkholderia sp. S171 [LMUF] 489214 489130 - Leu TAA [ENA] ¡û
>W2010912281 MTHB01000275 Betaproteobacteria Caballeronia sordidicola PAMC 26633 [MTHB] 3327 3243 - Leu TAA [ENA] ¡û
>W2011159044 OCSX01000001 Betaproteobacteria Burkholderia sp. D7 [OCSX] 1635399 1635315 - Leu TAA [ENA] ¡û
>W2011353480 RAIO01000001 Betaproteobacteria Caballeronia udeis ES_PA-B7 [RAIO] 4415181 4415265 + Leu TAA [ENA] ¡û
>W2011411298 RDRT01000001 Betaproteobacteria Caballeronia udeis ES_FE-H11 [RDRT] 515134 515050 - Leu TAA [ENA] ¡û
>W2011413203 REFQ01000001 Betaproteobacteria Caballeronia udeis ES_PA-D4 [REFQ] 2169593 2169509 - Leu TAA [ENA] ¡û
>W2011433138 RJKG01000001 Betaproteobacteria Caballeronia udeis ES_PA-A8 [RJKG] 4217904 4217988 + Leu TAA [ENA] ¡û
>W2011490600 RSET01000001 Betaproteobacteria Caballeronia sordidicola ES_PA-B12 [RSET] 1726272 1726188 - Leu TAA [ENA] ¡û
>W2011638329 SMMT01000001 Betaproteobacteria Caballeronia sordidicola ES_PA-C8 [SMMT] 3050704 3050788 + Leu TAA [ENA] ¡û
>W2011651208 SNYX01000001 Betaproteobacteria Caballeronia udeis ES_AL-A7 [SNYX] 3917091 3917007 - Leu TAA [ENA] ¡û
>W2011666139 SOSF01000001 Betaproteobacteria Caballeronia udeis ES_FE-B12 [SOSF] 2484551 2484635 + Leu TAA [ENA] ¡û
>W2012063883 VJWF01000001 Betaproteobacteria Caballeronia udeis ES_AL-G7 [VJWF] 1951033 1950949 - Leu TAA [ENA] ¡û
>W2110160762 JAAVUQ010000005 Betaproteobacteria Caballeronia sp. dw_19 [JAAVUQ] 223112 223196 + Leu TAA [ENA] ¡û
>W2110160959 JAAVUV010000003 Betaproteobacteria Caballeronia sp. dw_276 [JAAVUV] 229140 229224 + Leu TAA [ENA] ¡û
>C241133518 CP049156 Betaproteobacteria Caballeronia sp. SBC1 [CP049156] 1293623 1293539 - Leu TAA - ¡û
>C241135829 CP049316 Betaproteobacteria Caballeronia sp. SBC2 [CP049316] 1432849 1432765 - Leu TAA - ¡û
>C161070770 CP014306 Betaproteobacteria Burkholderia sp. PAMC 26561 [CP014306, CP014307, CP014315] 2447563 2447479 - Leu TAA [Ensembl] ¡û
>C161073100 CP014505 Betaproteobacteria Burkholderia sp. PAMC 28687 [CP014505, CP014506, CP014507] 1075772 1075688 - Leu TAA [Ensembl] ¡û
>W1610002281 AEJF01000193 Betaproteobacteria Caballeronia mineralivorans PML1(12) [AEJF] 1716 1632 - Leu TAA [ENA] ¡û
>W1610206348 FCOC02000001 Betaproteobacteria Caballeronia sordidicola [FCOC] 452809 452893 + Leu TAA [ENA] ¡û
>W1610206791 FCOK02000027 Betaproteobacteria Caballeronia udeis [FCOK] 18916 19000 + Leu TAA [ENA] ¡û
>W1610738755 LMPF01000001 Betaproteobacteria Burkholderia sp. Leaf177 [LMPF] 584300 584216 - Leu TAA [ENA] ¡û
>W1710003720 AEJF01000193 Betaproteobacteria Caballeronia mineralivorans PML1(12) [AEJF] 1716 1632 - Leu TAA [ENA] ¡û
>W1710207479 FCOC02000001 Betaproteobacteria Caballeronia sordidicola [FCOC] 452809 452893 + Leu TAA [ENA] ¡û
>W1710207541 FCOK02000027 Betaproteobacteria Caballeronia udeis [FCOK] 18916 19000 + Leu TAA [ENA] ¡û
Identical group No.210764 (1 seq.)
>PL171000466 CP002879 Betaproteobacteria Cupriavidus necator N-1 plasmid:pBB1 56997 57081 + Leu TAA [ENA] ¡û
Identical group No.274979 (8 seq.)
>W1710882301 LMTS01000025 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 13510 13587 + Leu TAA [ENA] ¡û
>W1810046234 NNBQ01000007 Betaproteobacteria Variovorax sp. B4 [NNBQ] 282319 282242 - Leu TAA [ENA] ¡û
>W1810046331 NNBR01000010 Betaproteobacteria Variovorax sp. B2 [NNBR] 398460 398383 - Leu TAA [ENA] ¡û
>PL201001439 LR594660 Betaproteobacteria Variovorax sp. PBL-H6 plasmid:2 [LR594660] 774674 774751 + Leu TAA [ENA] ¡û
>PL201001503 LR594667 Betaproteobacteria Variovorax sp. SRS16 plasmid:2 [LR594667] 63515 63438 - Leu TAA [ENA] ¡û
>PL201001545 LR594672 Betaproteobacteria Variovorax sp. PBL-E5 plasmid:2 [LR594672] 63515 63438 - Leu TAA [ENA] ¡û
>PL201001583 LR594690 Betaproteobacteria Variovorax sp. WDL1 plasmid:2 [LR594690] 63335 63258 - Leu TAA [ENA] ¡û
>W1610744227 LMTS01000025 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 13510 13587 + Leu TAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK