tRNA genes clustered and arranged according to each identical group

Candidatius Mariprofundia

Anticodon = CAT

HIT: 11 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.326099 (13 seq.)
>W1711585584 MNZW01000004 Zetaproteobacteria Zetaproteobacteria bacterium CG2_30_59_37 [MNZW] 17986 18062 + Met CAT [ENA] ¡û
>W131231761 AUIS01000003 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 132908 132832 - Met CAT [ENA] ¡û
>w018920 AATS01000001 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 285406 285333 - Met CAT [ENA] ¡û
>WENV180320620 OBKQ01001757 [OBKQ] soil metagenome; Clay 968 1044 + Met CAT [ENA] ¡û
>WENV180342385 OBLJ01013313 [OBLJ] soil metagenome; Clay 184 108 - Met CAT [ENA] ¡û
>WENV181292851 OFHF01029570 [OFHF] soil metagenome; Clay 25 101 + Met CAT [ENA] ¡û
>WENV181293161 OFHG01000156 [OFHG] soil metagenome; Clay 3322 3246 - Met CAT [ENA] ¡û
>WENV181295972 OFHJ01003053 [OFHJ] soil metagenome; Clay 1756 1832 + Met CAT [ENA] ¡û
>W2011964412 VBRY01000010 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 71515 71591 + Met CAT [ENA] ¡û
>W2011964426 VBRZ01000001 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 131213 131137 - Met CAT [ENA] ¡û
>W2110154945 JAAOMM010000034 Acidithiobacillia Acidithiobacillus caldus MELC5 [JAAOMM] 87 163 + Met CAT [ENA] ¡û
>W2110155254 JAAOMS010000180 Acidithiobacillia Acidithiobacillus caldus CV18-1 [JAAOMS] 7966 7890 - Met CAT [ENA] ¡û
>W1710759503 LIGC01000006 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 132800 132876 + Met CAT [ENA] ¡û
Identical group No.333281 (6 seq.)
>W1711583232 MNWY01000092 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_49_23 [MNWY] 20952 20876 - Met CAT [ENA] ¡û
>W1711583267 MNWZ01000093 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_53_45 [MNWZ] 5575 5651 + Met CAT [ENA] ¡û
>C181033362 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 2399226 2399150 - Met CAT - ¡û
>C181033387 CP018800 Zetaproteobacteria Mariprofundus ferrinatatus CP-8 [CP018800] 111569 111645 + Met CAT - ¡û
>W2012196075 VWNB01000001 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 239503 239427 - Ile2 CAT [ENA] ¡û
>W2012196132 VWNC01000002 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 446506 446430 - Ile2 CAT [ENA] ¡û
Identical group No.346128 (6 seq.)
>W131164302 ARAO01000238 Zetaproteobacteria zeta proteobacterium SCGC AB-137-I08 [ARAO] 2564 2640 + Met CAT [ENA] ¡û
>W131164473 ARAU01000015 Zetaproteobacteria Mariprofundus ferrooxydans M34 [ARAU] 26039 25963 - Met CAT [ENA] ¡û
>w018958 AATS01000017 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 47921 47997 + Met CAT [ENA] ¡û
>W2010572244 JAAVJJ010000004 Candidatius Mariprofundia Mariprofundus ferrooxydans O-1 [JAAVJJ] 53508 53584 + Ile2 CAT [ENA] ¡û
>W1710081292 BDFD01000011 Zetaproteobacteria Mariprofundus micogutta [BDFD] 29285 29361 + Met CAT [ENA] ¡û
>W1710759511 LIGC01000010 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 59994 60070 + Met CAT [ENA] ¡û
Identical group No.359855 (2 seq.)
>W2011964387 VBRY01000002 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 43402 43478 + Ile2 CAT [ENA] ¡û
>W2011964445 VBRZ01000006 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 57595 57671 + Ile2 CAT [ENA] ¡û
Identical group No.360339 (3 seq.)
>W141818936 JQLW01000005 Zetaproteobacteria Ghiorsea bivora TAG-1 [JQLW] 368459 368383 - Met CAT [ENA] ¡û
>W2011396417 RCFQ01000023 Candidatius Mariprofundia Mariprofundus sp. EBB-1 [RCFQ] 5217 5141 - Met CAT [ENA] ¡û
>W2012196142 VWNC01000003 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 9572 9496 - Met CAT [ENA] ¡û
Identical group No.398573 (2 seq.)
>W131164481 ARAU01000028 Zetaproteobacteria Mariprofundus ferrooxydans M34 [ARAU] 2685 2609 - Met CAT [ENA] ¡û
>W2010572237 JAAVJJ010000002 Candidatius Mariprofundia Mariprofundus ferrooxydans O-1 [JAAVJJ] 405189 405265 + Met CAT [ENA] ¡û
Identical group No.409421 (2 seq.)
>W131164267 ARAN01000183 Zetaproteobacteria zeta proteobacterium SCGC AB-133-C04 [ARAN] 23895 23971 + Met CAT [ENA] ¡û
>W2011396398 RCFQ01000006 Candidatius Mariprofundia Mariprofundus sp. EBB-1 [RCFQ] 36553 36477 - Ile2 CAT [ENA] ¡û
Identical group No.417617 (3 seq.)
>W1711583233 MNWY01000099 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_49_23 [MNWY] 3847 3771 - Met CAT [ENA] ¡û
>C181033370 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 1569173 1569097 - Met CAT - ¡û
>W2012196117 VWNB01000013 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 61978 62054 + Met CAT [ENA] ¡û
Identical group No.733998 (58 seq.)
>W1710891842 LNDB01000023 Bacillota Candidatus Dichloromethanomonas elyunquensis RM [LNDB] 655 581 - Met CAT [ENA] ¡û
>W1710927090 LOEZ01000036 Bacillota Gracilibacter sp. BRH_c7a [LOEZ] 33339 33265 - Met CAT [ENA] ¡û
>W1711342443 MCHF01000012 Bacillota Dehalobacter sp. TeCB1 [MCHF] 24843 24917 + Met CAT [ENA] ¡û
>W1711583266 MNWZ01000086 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_53_45 [MNWZ] 842 768 - Met CAT [ENA] ¡û
>W1711583313 MNXA01000036 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_55_237 [MNXA] 1910 1984 + Met CAT [ENA] ¡û
>W1711585599 MNZW01000013 Zetaproteobacteria Zetaproteobacteria bacterium CG2_30_59_37 [MNZW] 120374 120448 + Met CAT [ENA] ¡û
>W131162520 AQYY01000004 Bacillota Dehalobacter sp. FTH1 [AQYY] 268725 268651 - Met CAT [ENA] ¡û
>W131164198 ARAJ01000102 Zetaproteobacteria zeta proteobacterium SCGC AB-604-B04 [ARAJ] 843 769 - Met CAT [ENA] ¡û
>w018950 AATS01000008 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 32699 32773 + Met CAT [ENA] ¡û
>WENV180248929 OBEQ010153620 [OBEQ] groundwater metagenome; groundwater 231 157 - fMet CAT [ENA] ¡û
>WENV180294822 OBIZ01000733 [OBIZ] soil metagenome; soil 1660 1586 - fMet CAT [ENA] ¡û
>WENV180320966 OBKQ01070900 [OBKQ] soil metagenome; Clay 265 191 - fMet CAT [ENA] ¡û
>WENV180342453 OBLJ01021709 [OBLJ] soil metagenome; Clay 385 459 + fMet CAT [ENA] ¡û
>WENV180350234 OBLQ010000005 [OBLQ] soil metagenome; soil 10215 10141 - fMet CAT [ENA] ¡û
>WENV180350430 OBLQ010000858 [OBLQ] soil metagenome; soil 7751 7825 + fMet CAT [ENA] ¡û
>W141088277 AUUR01000025 Bacillota Dehalobacter sp. UNSWDHB [AUUR] 75093 75019 - Met CAT [ENA] ¡û
>WENV181293432 OFHG01003524 [OFHG] soil metagenome; Clay 325 251 - fMet CAT [ENA] ¡û
>WENV181294515 OFHH01005977 [OFHH] soil metagenome; Clay 167 93 - fMet CAT [ENA] ¡û
>WENV181296706 OFHJ01093398 [OFHJ] soil metagenome; Clay 463 389 - fMet CAT [ENA] ¡û
>WENV181297425 OFHK01042030 [OFHK] soil metagenome; Clay 227 153 - fMet CAT [ENA] ¡û
>W141246554 CANE01000005 Bacillota Dehalobacter restrictus E1 [CANE] 47530 47604 + Met CAT [ENA] ¡û
>W141246610 CANF01000026 Bacillota Dehalobacter sp. E1 x Sedimentibacter sp. B4 coculture E1 X Sedimentibacter sp. B4 coculture [CANF] 47529 47603 + Met CAT [ENA] ¡û
>WENV170658904 JUEG02001334 [JUEG] rock porewater metagenome; Opalinus Clay rock BIC-A1 borehole 255661 255735 + Met CAT [ENA] ¡û
>WENV170659028 JXWO01000083 [JXWO] soil metagenome; anaerobic bioreactor containing WBC-2 dechlorinating consortium enriched on 1,1,2,2-TeCA amended 18386 18460 + Met CAT [ENA] ¡û
>WENV170784155 MCHG01000048 [MCHG] permafrost metagenome; enrichment culture inoculated with soil; incubated with H2/CO2 at 20 degrees celsius and 37551 37477 - Met CAT [ENA] ¡û
>WENV170784325 MCHG01000828 [MCHG] permafrost metagenome; enrichment culture inoculated with soil; incubated with H2/CO2 at 20 degrees celsius and 5031 5105 + Met CAT [ENA] ¡û
>C181033379 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 708142 708068 - Met CAT - ¡û
>C181033380 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 702154 702080 - Met CAT - ¡û
>C181033403 CP018800 Zetaproteobacteria Mariprofundus ferrinatatus CP-8 [CP018800] 1618552 1618626 + Met CAT - ¡û
>C141011733 CP007033 Bacillota Dehalobacter restrictus DSM 9455 PER-K23; DSM 9455 [CP007033] 480303 480377 + Met CAT [Ensembl] ¡û
>W1910647157 LXPC01000009 Bacillota Dehalobacter sp. MCB1 [LXPC] 30682 30756 + Met CAT [ENA] ¡û
>W1911608693 PNXX01000006 Bacillota Dehalobacter sp. 14DCB1 [PNXX] 30593 30667 + Met CAT [ENA] ¡û
>W1911613566 POSF01000019 Bacillota Dehalobacter sp. 12DCB1 [POSF] 154218 154144 - Met CAT [ENA] ¡û
>W1810047156 OMOF01000012 Bacillota Candidatus Desulfosporosinus infrequens SbF1 Peat soil MAG SbF1 [OMOF] 4760 4834 + Met CAT [ENA] ¡û
>W1810047175 OMOF01000101 Bacillota Candidatus Desulfosporosinus infrequens SbF1 Peat soil MAG SbF1 [OMOF] 68262 68188 - Met CAT [ENA] ¡û
>W2010572224 JAAVJJ010000001 Candidatius Mariprofundia Mariprofundus ferrooxydans O-1 [JAAVJJ] 863693 863767 + fMet CAT [ENA] ¡û
>W2010792517 LXPC01000009 Bacillota Dehalobacter sp. MCB1 [LXPC] 30682 30756 + fMet CAT [ENA] ¡û
>W2011206915 PNXX01000006 Bacillota Dehalobacter sp. 14DCB1 [PNXX] 30593 30667 + fMet CAT [ENA] ¡û
>W2011207103 POSF01000019 Bacillota Dehalobacter sp. 12DCB1 [POSF] 154218 154144 - fMet CAT [ENA] ¡û
>W2011674088 SPQQ01000010 Bacillota Desulfosporosinus fructosivorans 63.6F [SPQQ] 139549 139475 - fMet CAT [ENA] ¡û
>W2011674105 SPQQ01000036 Bacillota Desulfosporosinus fructosivorans 63.6F [SPQQ] 1870 1796 - fMet CAT [ENA] ¡û
>W2011674129 SPQR01000003 Bacillota Desulfosporosinus sp. Sb-LF [SPQR] 390039 389965 - fMet CAT [ENA] ¡û
>W2011674171 SPQR01000025 Bacillota Desulfosporosinus sp. Sb-LF [SPQR] 18009 17935 - fMet CAT [ENA] ¡û
>W2012196098 VWNB01000005 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 83751 83825 + fMet CAT [ENA] ¡û
>W2012196156 VWNC01000008 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 52440 52366 - fMet CAT [ENA] ¡û
>C231314381 CP092282 Bacillota Dehalobacter sp. DCM [CP092282] 699976 700050 + fMet CAT - ¡û
>C241114526 CP046996 Bacillota Dehalobacter restrictus 12DCA [CP046996] 534737 534811 + fMet CAT - ¡û
>W1511430029 JUEE01000021 Bacillota Desulfosporosinus sp. BICA1-9 [JUEE] 18456 18530 + Met CAT [ENA] ¡û
>W1511533683 JYNH01000068 Bacillota Desulfosporosinus sp. I2 [JYNH] 8773 8847 + Met CAT [ENA] ¡û
>W1511564561 LADV01000104 Bacillota Peptococcaceae bacterium BRH_c23 [LADV] 14566 14640 + Met CAT [ENA] ¡û
>W11177257 AGAF01000105 Bacillota Desulfosporosinus sp. OT [AGAF] 67210 67136 - Met CAT [ENA] ¡û
>W121036139 AHLV01000001 Bacillota Desulfosporosinus youngiae DSM 17734 [AHLV] 247623 247697 + Met CAT [ENA] ¡û
>C131008557 CP003869 Bacillota Dehalobacter sp. DCA [CP003869] 1919911 1919837 - Met CAT [Ensembl] ¡û
>C131008608 CP003870 Bacillota Dehalobacter sp. CF [CP003870] 1949690 1949616 - Met CAT [Ensembl] ¡û
>W1610752207 LNDB01000023 Bacillota Candidatus Dichloromethanomonas elyunquensis RM [LNDB] 655 581 - Met CAT [ENA] ¡û
>W1610784632 LOEZ01000036 Bacillota Gracilibacter sp. BRH_c7a [LOEZ] 33339 33265 - Met CAT [ENA] ¡û
>W1710516519 FNCP01000059 Bacillota Desulfosporosinus hippei DSM 8344 [FNCP] 166 240 + Met CAT [ENA] ¡û
>W1710759497 LIGC01000004 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 94816 94890 + Met CAT [ENA] ¡û
Identical group No.749196 (4 seq.)
>W1711583265 MNWZ01000086 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_53_45 [MNWZ] 980 906 - Met CAT [ENA] ¡û
>W1711585554 MNZV01000010 Zetaproteobacteria Zetaproteobacteria bacterium CG2_30_46_52 [MNZV] 207639 207565 - Met CAT [ENA] ¡û
>W141818945 JQLW01000006 Zetaproteobacteria Ghiorsea bivora TAG-1 [JQLW] 216615 216541 - Met CAT [ENA] ¡û
>W2110504310 JAFIUL010000004 Candidatius Mariprofundia Mariprofundus ferrooxydans [JAFIUL] 14895 14969 + fMet CAT [ENA] ¡û
Identical group No.767798 (9 seq.)
>W131164450 ARAU01000005 Zetaproteobacteria Mariprofundus ferrooxydans M34 [ARAU] 41377 41303 - Met CAT [ENA] ¡û
>W1711583244 MNWY01000113 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_49_23 [MNWY] 1371 1297 - Met CAT [ENA] ¡û
>w018949 AATS01000008 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 32563 32637 + Met CAT [ENA] ¡û
>W2011396393 RCFQ01000003 Candidatius Mariprofundia Mariprofundus sp. EBB-1 [RCFQ] 124051 123977 - fMet CAT [ENA] ¡û
>W2011964403 VBRY01000006 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 26211 26137 - fMet CAT [ENA] ¡û
>W2011964404 VBRY01000006 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 26078 26004 - fMet CAT [ENA] ¡û
>W2011964465 VBRZ01000044 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 557 483 - fMet CAT [ENA] ¡û
>W2011964466 VBRZ01000044 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 424 350 - fMet CAT [ENA] ¡û
>W1710759496 LIGC01000004 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 94680 94754 + Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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