tRNA genes clustered and arranged according to each identical group

Candidatius Mariprofundia

Anticodon = CCA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.513676 (24 seq.)
>W1711583221 MNWY01000036 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_49_23 [MNWY] 28457 28382 - Trp CCA [ENA] ¡û
>W131034051 AJGP01000029 Gammaproteobacteria Isoalcanivorax pacificus W11-5 [AJGP] 136 211 + Trp CCA [ENA] ¡û
>W131231229 AUIH01000024 Gammaproteobacteria Saccharospirillum impatiens DSM 12546 [AUIH] 47034 46959 - Trp CCA [ENA] ¡û
>WENV180296658 OBJA01001540 [OBJA] soil metagenome; sediment, water from around vicinity 168 243 + Trp CCA [ENA] ¡û
>WENV180368146 OBOF01029728 [OBOF] marine metagenome; ENVO:00002010 112 187 + Trp CCA [ENA] ¡û
>WENV182546161 OJBO01001615 [OJBO] seawater metagenome; Sea water 7474 7399 - Trp CCA [ENA] ¡û
>WENV182546728 OJBP01001690 [OJBP] seawater metagenome; Sea water 1705 1630 - Trp CCA [ENA] ¡û
>WENV182589181 OJIA01000004 [OJIA] seawater metagenome; Sea water 102 177 + Trp CCA [ENA] ¡û
>C181200142 CP031415 Gammaproteobacteria Saccharospirillum mangrovi HK-33 [CP031415] 525771 525846 + Trp CCA - ¡û
>W1910744967 MIES01000023 Gammaproteobacteria Saccharospirillum sp. MSK14-1 [MIES] 15667 15592 - Trp CCA [ENA] ¡û
>W1810477919 QAPE01000019 Gammaproteobacteria Saccharospirillum mangrovi HK-33 [QAPE] 143 218 + Trp CCA [ENA] ¡û
>W1810604655 QGMP01000004 Gammaproteobacteria Isoalcanivorax indicus SW127 [QGMP] 136861 136786 - Trp CCA [ENA] ¡û
>C151006522 CP004387 Gammaproteobacteria Isoalcanivorax pacificus W11-5 [CP004387] 598348 598423 + Trp CCA [Ensembl] ¡û
>W2010071727 AQOR01000056 Gammaproteobacteria Alcanivorax sp. S71-1-4 [AQOR] 15830 15755 - Trp CCA [ENA] ¡û
>W2010529703 JAAOIX010000018 Gammaproteobacteria Pseudomaricurvus alcaniphilus MEBiC06469 [JAAOIX] 16039 15964 - Trp CCA [ENA] ¡û
>W2010878399 MIES01000023 Gammaproteobacteria Saccharospirillum sp. MSK14-1 [MIES] 15667 15592 - Trp CCA [ENA] ¡û
>W2011398769 RCIP01000009 Gammaproteobacteria Saccharospirillum sp. LZ-5 [RCIP] 421 496 + Trp CCA [ENA] ¡û
>W2011670463 SPIA01000006 Gammaproteobacteria Gammaproteobacteria bacterium LSUCC0057 [SPIA] 345 420 + Trp CCA [ENA] ¡û
>W2011964405 VBRY01000007 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 680 755 + Trp CCA [ENA] ¡û
>W2011964443 VBRZ01000004 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 181076 181001 - Trp CCA [ENA] ¡û
>W2110047984 BMXR01000024 Gammaproteobacteria Saccharospirillum salsuginis KCTC 22169 [BMXR] 15741 15666 - Trp CCA [ENA] ¡û
>W2110691052 JAIOUB010000005 Gammaproteobacteria Alcanivorax sp. JB21 [JAIOUB] 1277 1352 + Trp CCA [ENA] ¡û
>C231402040 CP098455 Gammaproteobacteria Spongiibacter taiwanensis SPT1 [CP098455] 1651928 1651853 - Trp CCA - ¡û
>W1511564153 LADM01000059 Gammaproteobacteria Gammaproteobacteria bacterium BRH_c0 [LADM] 15376 15301 - Trp CCA [ENA] ¡û
Identical group No.537593 (10 seq.)
>W131164307 ARAO01000238 Zetaproteobacteria zeta proteobacterium SCGC AB-137-I08 [ARAO] 37338 37263 - Trp CCA [ENA] ¡û
>W131164331 ARAQ01000126 Zetaproteobacteria zeta proteobacterium SCGC AB-602-C20 [ARAQ] 25767 25692 - Trp CCA [ENA] ¡û
>W1711585567 MNZV01000019 Zetaproteobacteria Zetaproteobacteria bacterium CG2_30_46_52 [MNZV] 151256 151181 - Trp CCA [ENA] ¡û
>C181033360 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 2521038 2520963 - Trp CCA - ¡û
>W141818926 JQLW01000001 Zetaproteobacteria Ghiorsea bivora TAG-1 [JQLW] 83628 83553 - Trp CCA [ENA] ¡û
>W2011396413 RCFQ01000015 Candidatius Mariprofundia Mariprofundus sp. EBB-1 [RCFQ] 248 323 + Trp CCA [ENA] ¡û
>W2012196115 VWNB01000010 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 90746 90671 - Trp CCA [ENA] ¡û
>W2012196147 VWNC01000004 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 114303 114378 + Trp CCA [ENA] ¡û
>W2130030624 JAFISZ010000031 Candidatius Mariprofundia Mariprofundus ferrooxydans [JAFISZ] 417 342 - Trp CCA [ENA] ¡û
>W1710081304 BDFD01000027 Zetaproteobacteria Mariprofundus micogutta [BDFD] 362 437 + Trp CCA [ENA] ¡û
Identical group No.609205 (4 seq.)
>W131164454 ARAU01000008 Zetaproteobacteria Mariprofundus ferrooxydans M34 [ARAU] 134334 134259 - Trp CCA [ENA] ¡û
>w018965 AATS01000024 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 16824 16901 + Trp CCA [ENA] ¡û
>W2010572241 JAAVJJ010000003 Candidatius Mariprofundia Mariprofundus ferrooxydans O-1 [JAAVJJ] 466418 466343 - Trp CCA [ENA] ¡û
>W1710759525 LIGC01000026 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 19368 19293 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK