tRNA genes clustered and arranged according to each identical group

Candidatius Mariprofundia

Anticodon = GTC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.308123 (93 seq.)
>W1711065275 LSBQ01000022 Gammaproteobacteria Idiomarina sp. T82-3 [LSBQ] 23356 23280 - Asp GTC [ENA] ¡û
>W1711065276 LSBQ01000022 Gammaproteobacteria Idiomarina sp. T82-3 [LSBQ] 23253 23177 - Asp GTC [ENA] ¡û
>W1711317453 MAXH01000078 Thermodesulfobacteriota Desulfobulbaceae bacterium S3730MH12 [MAXH] 10053 9977 - Asp GTC [ENA] ¡û
>W1711356885 MDGT01000002 Gammaproteobacteria Idiomarina sp. MD25a [MDGT] 168387 168463 + Asp GTC [ENA] ¡û
>W1711356886 MDGT01000002 Gammaproteobacteria Idiomarina sp. MD25a [MDGT] 168490 168566 + Asp GTC [ENA] ¡û
>W1711583272 MNWZ01000104 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_53_45 [MNWZ] 8913 8989 + Asp GTC [ENA] ¡û
>W1711583293 MNXA01000015 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_55_237 [MNXA] 6871 6947 + Asp GTC [ENA] ¡û
>W1711585550 MNZV01000009 Zetaproteobacteria Zetaproteobacteria bacterium CG2_30_46_52 [MNZV] 285752 285828 + Asp GTC [ENA] ¡û
>W1711585593 MNZW01000010 Zetaproteobacteria Zetaproteobacteria bacterium CG2_30_59_37 [MNZW] 202052 202128 + Asp GTC [ENA] ¡û
>W131164316 ARAP01000132 Zetaproteobacteria zeta proteobacterium SCGC AB-133-G06 [ARAP] 7150 7226 + Asp GTC [ENA] ¡û
>C000600 CP000453 Gammaproteobacteria Alkalilimnicola ehrlichii MLHE-1 [CP000453] 2591346 2591270 - Asp GTC [Ensembl] ¡û
>C010547 CP000544 Gammaproteobacteria Halorhodospira halophila SL1 [CP000544] 677873 677797 - Asp GTC [Ensembl] ¡û
>w012960 AAMX01000028 Gammaproteobacteria Idiomarina baltica OS145 [AAMX] 7054 7132 + Asp GTC [ENA] ¡û
>w012959 AAMX01000028 Gammaproteobacteria Idiomarina baltica OS145 [AAMX] 6951 7029 + Asp GTC [ENA] ¡û
>WENV180320639 OBKQ01002556 [OBKQ] soil metagenome; Clay 529 453 - Asp GTC [ENA] ¡û
>WENV180342239 OBLJ01001664 [OBLJ] soil metagenome; Clay 648 572 - Asp GTC [ENA] ¡û
>WENV181293238 OFHG01000549 [OFHG] soil metagenome; Clay 859 935 + Asp GTC [ENA] ¡û
>WENV181313290 OFJF01010456 [OFJF] marine metagenome; seawater 188 112 - Asp GTC [ENA] ¡û
>C08000373 CP000453 Gammaproteobacteria Alkalilimnicola ehrlichii MLHE-1 [CP000453] 2591346 2591273 - Asp GTC [Ensembl] ¡û
>WENV182560986 OJDV01001370 [OJDV] seawater metagenome; Sea water 4306 4230 - Asp GTC [ENA] ¡û
>WENV182588985 OJHY01006396 [OJHY] seawater metagenome; Sea water 534 458 - Asp GTC [ENA] ¡û
>WENV183708828 PDWI01020241 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 106 30 - Asp GTC [ENA] ¡û
>WENV183709172 PDWI01025001 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 5550 5626 + Asp GTC [ENA] ¡û
>WENV183714320 PDWI01177643 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1203 1279 + Asp GTC [ENA] ¡û
>WENV183720861 PDWJ01047642 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 3889 3965 + Asp GTC [ENA] ¡û
>WENV183746800 PPCM01000011 [PPCM] marine sediment metagenome; marine sediment 402527 402451 - Asp GTC [ENA] ¡û
>WENV183746802 PPCM01000011 [PPCM] marine sediment metagenome; marine sediment 402319 402243 - Asp GTC [ENA] ¡û
>WENV170013941 AVFP01000159 [AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh 4264 4340 + Asp GTC [ENA] ¡û
>WENV170680367 LFCJ01009668 [LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1 6074 5998 - Asp GTC [ENA] ¡û
>WENV170682325 LFFM01009268 [LFFM] soda lake metagenome; sample Tc-Br; brine of Tanatar trona crystallizer 1893 1817 - Asp GTC [ENA] ¡û
>WENV170695477 LGVE01102654 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 316 240 - Asp GTC [ENA] ¡û
>WENV170696834 LGVF01053501 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 5321 5397 + Asp GTC [ENA] ¡û
>WENV170702366 LKMJ01001521 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 12243 12167 - Asp GTC [ENA] ¡û
>WENV170740374 LULR01007162 [LULR] marine metagenome; Red Sea water column Station 108 - depth 500m 600 524 - Asp GTC [ENA] ¡û
>WENV170885664 MDTC01206593 [MDTC] marine metagenome; seawater 5645 5569 - Asp GTC [ENA] ¡û
>WENV170921285 MDTG01011459 [MDTG] marine metagenome; seawater 4715 4791 + Asp GTC [ENA] ¡û
>WENV170921286 MDTG01011459 [MDTG] marine metagenome; seawater 4818 4894 + Asp GTC [ENA] ¡û
>WENV170964402 MRWG01010092 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 2422 2346 - Asp GTC [ENA] ¡û
>WENV170964618 MRWG01024134 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 967 891 - Asp GTC [ENA] ¡û
>C181001649 AP017372 Gammaproteobacteria Halorhodospira halochloris DSM 1059 [AP017372] 552030 552106 + Asp GTC - ¡û
>C181033366 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 1932073 1931997 - Asp GTC - ¡û
>C181033368 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 1931830 1931754 - Asp GTC - ¡û
>C181033391 CP018800 Zetaproteobacteria Mariprofundus ferrinatatus CP-8 [CP018800] 543614 543690 + Asp GTC - ¡û
>C181146727 CP027188 Gammaproteobacteria Idiomarina sp. OT37-5b [CP027188] 1794353 1794277 - Asp GTC - ¡û
>C181146728 CP027188 Gammaproteobacteria Idiomarina sp. OT37-5b [CP027188] 1794232 1794156 - Asp GTC - ¡û
>W09104163 AALK01000005 Gammaproteobacteria Alkalilimnicola ehrlichii MLHE-1 [AALK] 146 70 - Asp GTC [ENA] ¡û
>W09105227 AAOQ01000004 Gammaproteobacteria Halorhodospira halophila SL1 [AAOQ] 26944 26868 - Asp GTC [ENA] ¡û
>W141818957 JQLW01000009 Zetaproteobacteria Ghiorsea bivora TAG-1 [JQLW] 57252 57176 - Asp GTC [ENA] ¡û
>W1910699268 MERD01000031 Betaproteobacteria Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 [MERD] 13702 13626 - Asp GTC [ENA] ¡û
>W1911585204 PIPS01000002 Gammaproteobacteria Idiomarina aquatica SN-14 [PIPS] 62981 63057 + Asp GTC [ENA] ¡û
>W1911585205 PIPS01000002 Gammaproteobacteria Idiomarina aquatica SN-14 [PIPS] 63102 63178 + Asp GTC [ENA] ¡û
>W1911585365 PIPV01000010 Gammaproteobacteria Idiomarina fontislapidosi F23 [PIPV] 25744 25820 + Asp GTC [ENA] ¡û
>W1911585366 PIPV01000010 Gammaproteobacteria Idiomarina fontislapidosi F23 [PIPV] 25847 25923 + Asp GTC [ENA] ¡û
>W1911585843 PIQF01000001 Gammaproteobacteria Idiomarina seosinensis CL-SP19 [PIQF] 1126857 1126781 - Asp GTC [ENA] ¡û
>W1911585844 PIQF01000001 Gammaproteobacteria Idiomarina seosinensis CL-SP19 [PIQF] 1126728 1126652 - Asp GTC [ENA] ¡û
>W1810671406 QJST01000011 Gammaproteobacteria Idiomarina fontislapidosi CECT 5859 [QJST] 62765 62689 - Asp GTC [ENA] ¡û
>W1810671407 QJST01000011 Gammaproteobacteria Idiomarina fontislapidosi CECT 5859 [QJST] 62662 62586 - Asp GTC [ENA] ¡û
>W2010347838 CADCXY010000001 Gammaproteobacteria Idiomarina sp. CECT 9734 [CADCXY] 913500 913424 - Asp GTC [ENA] ¡û
>W2010347839 CADCXY010000001 Gammaproteobacteria Idiomarina sp. CECT 9734 [CADCXY] 913398 913322 - Asp GTC [ENA] ¡û
>W2010832694 MERD01000031 Betaproteobacteria Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 [MERD] 13702 13626 - Asp GTC [ENA] ¡û
>W2011194597 PIPS01000002 Gammaproteobacteria Idiomarina aquatica SN-14 [PIPS] 62981 63057 + Asp GTC [ENA] ¡û
>W2011194598 PIPS01000002 Gammaproteobacteria Idiomarina aquatica SN-14 [PIPS] 63102 63178 + Asp GTC [ENA] ¡û
>W2011194758 PIPV01000010 Gammaproteobacteria Idiomarina fontislapidosi F23 [PIPV] 25744 25820 + Asp GTC [ENA] ¡û
>W2011194759 PIPV01000010 Gammaproteobacteria Idiomarina fontislapidosi F23 [PIPV] 25847 25923 + Asp GTC [ENA] ¡û
>W2011195236 PIQF01000001 Gammaproteobacteria Idiomarina seosinensis CL-SP19 [PIQF] 1126857 1126781 - Asp GTC [ENA] ¡û
>W2011195237 PIQF01000001 Gammaproteobacteria Idiomarina seosinensis CL-SP19 [PIQF] 1126728 1126652 - Asp GTC [ENA] ¡û
>W2011393340 RCDA01000007 Gammaproteobacteria Alkalispirillum mobile DSM 12769 [RCDA] 27587 27511 - Asp GTC [ENA] ¡û
>W2011396409 RCFQ01000010 Candidatius Mariprofundia Mariprofundus sp. EBB-1 [RCFQ] 47448 47372 - Asp GTC [ENA] ¡û
>W2011649201 SNXI01000014 Gammaproteobacteria Idiomarina aquatica 18_TX [SNXI] 44963 44887 - Asp GTC [ENA] ¡û
>W2011649202 SNXI01000014 Gammaproteobacteria Idiomarina aquatica 18_TX [SNXI] 44842 44766 - Asp GTC [ENA] ¡û
>W2011702247 SWCN01000005 Thermodesulfobacteriota Desulforhopalus sp. IMCC35007 [SWCN] 34836 34912 + Asp GTC [ENA] ¡û
>W2011702249 SWCN01000005 Thermodesulfobacteriota Desulforhopalus sp. IMCC35007 [SWCN] 35063 35139 + Asp GTC [ENA] ¡û
>W2011964381 VBRY01000001 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 216453 216529 + Asp GTC [ENA] ¡û
>W2011964459 VBRZ01000023 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 10290 10366 + Asp GTC [ENA] ¡û
>W2012196106 VWNB01000009 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 7628 7704 + Asp GTC [ENA] ¡û
>W2012196108 VWNB01000009 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 7871 7947 + Asp GTC [ENA] ¡û
>W2012196121 VWNC01000001 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 418849 418925 + Asp GTC [ENA] ¡û
>W2012196123 VWNC01000001 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 419094 419170 + Asp GTC [ENA] ¡û
>C211013556 AP024086 Thermodesulfobacteriota Desulfobulbaceae bacterium KT2 [AP024086] 1862662 1862586 - Asp GTC - ¡û
>C211013558 AP024086 Thermodesulfobacteriota Desulfobulbaceae bacterium KT2 [AP024086] 1862315 1862239 - Asp GTC - ¡û
>W2110751889 NHSE01000006 Gammaproteobacteria Halorhodospira halophila IM9620 [NHSE] 13385 13461 + Asp GTC [ENA] ¡û
>W2110752278 NHSN01000010 Gammaproteobacteria Halorhodospira halophila IM9626 [NHSN] 22493 22417 - Asp GTC [ENA] ¡û
>W2110753396 NRRM01000003 Gammaproteobacteria Halorhodospira halochloris DSM 1059 [NRRM] 104359 104283 - Asp GTC [ENA] ¡û
>W2110753431 NRRN01000012 Gammaproteobacteria Halorhodospira abdelmalekii DSM 2110 [NRRN] 61663 61587 - Asp GTC [ENA] ¡û
>W2110753485 NRRO01000006 Gammaproteobacteria Halorhodospira halophila IM 9630 [NRRO] 21035 21111 + Asp GTC [ENA] ¡û
>C241146384 CP050695 Gammaproteobacteria Aquisalimonas sp. 2447 [CP050695] 2693489 2693413 - Asp GTC - ¡û
>W1610906064 LSBQ01000022 Gammaproteobacteria Idiomarina sp. T82-3 [LSBQ] 23356 23280 - Asp GTC [ENA] ¡û
>W1610906065 LSBQ01000022 Gammaproteobacteria Idiomarina sp. T82-3 [LSBQ] 23253 23177 - Asp GTC [ENA] ¡û
>W1710081282 BDFD01000004 Zetaproteobacteria Mariprofundus micogutta [BDFD] 59566 59642 + Asp GTC [ENA] ¡û
>W1710081284 BDFD01000004 Zetaproteobacteria Mariprofundus micogutta [BDFD] 59805 59881 + Asp GTC [ENA] ¡û
>W1710525179 FNJI01000010 Thermodesulfobacteriota Desulforhopalus singaporensis [FNJI] 131698 131622 - Asp GTC [ENA] ¡û
>W1710549080 FOEG01000001 Gammaproteobacteria Aquisalimonas asiatica [FOEG] 918643 918567 - Asp GTC [ENA] ¡û
>W1710587106 FQXS01000038 Thermodesulfobacteriota Desulfofustis glycolicus DSM 9705 [FQXS] 35707 35783 + Asp GTC [ENA] ¡û
Identical group No.333282 (9 seq.)
>W1711583242 MNWY01000106 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_49_23 [MNWY] 11375 11299 - Asp GTC [ENA] ¡û
>W1711583270 MNWZ01000104 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_53_45 [MNWZ] 8645 8721 + Asp GTC [ENA] ¡û
>W1711583998 MNXX01000114 Betaproteobacteria Comamonadaceae bacterium CG2_30_59_20 [MNXX] 18077 18001 - Asp GTC [ENA] ¡û
>W131164220 ARAK01000178 Zetaproteobacteria zeta proteobacterium SCGC AB-137-C09 [ARAK] 4196 4272 + Asp GTC [ENA] ¡û
>W131164252 ARAM01000092 Zetaproteobacteria zeta proteobacterium SCGC AB-602-E04 [ARAM] 9739 9663 - Asp GTC [ENA] ¡û
>W131164459 ARAU01000010 Zetaproteobacteria Mariprofundus ferrooxydans M34 [ARAU] 96566 96490 - Asp GTC [ENA] ¡û
>w018933 AATS01000004 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 54707 54629 - Asp GTC [ENA] ¡û
>W2010572256 JAAVJJ010000005 Candidatius Mariprofundia Mariprofundus ferrooxydans O-1 [JAAVJJ] 249010 249086 + Asp GTC [ENA] ¡û
>W1710759487 LIGC01000003 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 28768 28844 + Asp GTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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