tRNA genes clustered and arranged according to each identical group

Candidatius Mariprofundia

Anticodon = TCT

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.329495 (59 seq.)
>W1711078146 LSMO01000086 Gammaproteobacteria Alcanivorax sp. Nap_24 [LSMO] 10007 10083 + Arg TCT [ENA] ¡û
>W1711224048 LXTS01001220 Gammaproteobacteria Alcanivorax sp. CP2C [LXTS] 1754 1830 + Arg TCT [ENA] ¡û
>W1711585588 MNZW01000010 Zetaproteobacteria Zetaproteobacteria bacterium CG2_30_59_37 [MNZW] 194980 195056 + Arg TCT [ENA] ¡û
>WENV182585664 OJHI01000356 [OJHI] seawater metagenome; Sea water 5055 4979 - Arg TCT [ENA] ¡û
>WENV183060602 OLHY01000622 [OLHY] seawater metagenome; Sea water 1671 1747 + Arg TCT [ENA] ¡û
>WENV170121395 CENM01000231 [CENM] marine metagenome genome assembly TARA_032_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 80 156 + Arg TCT [ENA] ¡û
>WENV170176864 CEOS01133200 [CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2361 2285 - Arg TCT [ENA] ¡û
>WENV170192480 CEPF01003071 [CEPF] marine metagenome genome assembly TARA_039_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 91 167 + Arg TCT [ENA] ¡û
>WENV170192794 CEPG01010855 [CEPG] marine metagenome genome assembly TARA_046_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 859 935 + Arg TCT [ENA] ¡û
>WENV170202670 CEPR01105687 [CEPR] marine metagenome genome assembly TARA_039_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1125 1201 + Arg TCT [ENA] ¡û
>WENV170221736 CEQC01004643 [CEQC] marine metagenome genome assembly TARA_076_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 82 158 + Arg TCT [ENA] ¡û
>WENV170227968 CEQF01155724 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1810 1886 + Arg TCT [ENA] ¡û
>WENV170229393 CEQG01114654 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9090 9014 - Arg TCT [ENA] ¡û
>WENV170231374 CEQH01150692 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1957 2033 + Arg TCT [ENA] ¡û
>WENV170232731 CEQI01095206 [CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2577 2501 - Arg TCT [ENA] ¡û
>WENV170234060 CEQK01001783 [CEQK] marine metagenome genome assembly TARA_076_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9187 9111 - Arg TCT [ENA] ¡û
>WENV170238637 CEQM01202970 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 586 510 - Arg TCT [ENA] ¡û
>WENV170249217 CEQR01110557 [CEQR] marine metagenome genome assembly TARA_070_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 84 160 + Arg TCT [ENA] ¡û
>WENV170254164 CEQU01253628 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 82 158 + Arg TCT [ENA] ¡û
>WENV170256755 CEQX01125637 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 75 151 + Arg TCT [ENA] ¡û
>WENV170259258 CEQY01161946 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 75 151 + Arg TCT [ENA] ¡û
>WENV170263284 CERC01030709 [CERC] marine metagenome genome assembly TARA_070_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2157 2233 + Arg TCT [ENA] ¡û
>WENV170264343 CERD01026105 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9221 9145 - Arg TCT [ENA] ¡û
>WENV170266534 CERE01083563 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9234 9158 - Arg TCT [ENA] ¡û
>WENV170267116 CERF01006175 [CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9176 9100 - Arg TCT [ENA] ¡û
>WENV170268938 CERH01011050 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4605 4681 + Arg TCT [ENA] ¡û
>WENV170271425 CERJ01014543 [CERJ] marine metagenome genome assembly TARA_066_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 82 158 + Arg TCT [ENA] ¡û
>WENV170274107 CERL01243665 [CERL] marine metagenome genome assembly TARA_068_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3983 3907 - Arg TCT [ENA] ¡û
>WENV170283397 CERU01007111 [CERU] marine metagenome genome assembly TARA_065_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 479 555 + Arg TCT [ENA] ¡û
>WENV170289935 CERY01009198 [CERY] marine metagenome genome assembly TARA_065_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4018 3942 - Arg TCT [ENA] ¡û
>WENV170293697 CESC01001738 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 592 668 + Arg TCT [ENA] ¡û
>WENV170307777 CESK01006471 [CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 430 506 + Arg TCT [ENA] ¡û
>WENV170317937 CESQ01000186 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 86 162 + Arg TCT [ENA] ¡û
>WENV170323030 CESR01230723 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 500 424 - Arg TCT [ENA] ¡û
>WENV170330493 CESV01316110 [CESV] marine metagenome genome assembly TARA_100_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 75 151 + Arg TCT [ENA] ¡û
>WENV170334714 CESZ01002054 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 227 303 + Arg TCT [ENA] ¡û
>WENV170379705 CETV01194268 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 542 466 - Arg TCT [ENA] ¡û
>WENV170380936 CETW01100668 [CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2603 2527 - Arg TCT [ENA] ¡û
>WENV170388573 CETZ01100746 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 73 149 + Arg TCT [ENA] ¡û
>WENV170476502 CEVI01117787 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 529 605 + Arg TCT [ENA] ¡û
>WENV170550716 CXWF01016891 [CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 44 120 + Arg TCT [ENA] ¡û
>WENV170578856 FUFK010037444 [FUFK] metagenome; unknown 32708 32784 + Arg TCT [ENA] ¡û
>WENV170592312 FUFK010804425 [FUFK] metagenome; unknown 1690 1766 + Arg TCT [ENA] ¡û
>WENV170593242 FUFK010853573 [FUFK] metagenome; unknown 367 291 - Arg TCT [ENA] ¡û
>WENV170594127 FUFK011190157 [FUFK] metagenome; unknown 159 235 + Arg TCT [ENA] ¡û
>WENV170765493 LWDU01037657 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 79670 79746 + Arg TCT [ENA] ¡û
>WENV170806519 MDSW01082967 [MDSW] marine metagenome; seawater 7010 6934 - Arg TCT [ENA] ¡û
>WENV170822368 MDSY01039139 [MDSY] marine metagenome; seawater 12690 12614 - Arg TCT [ENA] ¡û
>WENV170853492 MDTA01170677 [MDTA] marine metagenome; seawater 12947 13023 + Arg TCT [ENA] ¡û
>WENV170927276 MDTG01114566 [MDTG] marine metagenome; seawater 5088 5012 - Arg TCT [ENA] ¡û
>WENV170962553 MRWF01020528 [MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 32899 32975 + Arg TCT [ENA] ¡û
>WENV170962588 MRWF01021148 [MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 564142 564066 - Arg TCT [ENA] ¡û
>WENV170964897 MRWG01067468 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 207 131 - Arg TCT [ENA] ¡û
>W2010415669 FXTF01000024 Gammaproteobacteria Alcanivorax sp. DSM 26295 [FXTF] 32254 32330 + Arg TCT [ENA] ¡û
>W2012196085 VWNB01000004 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 200285 200361 + Arg TCT [ENA] ¡û
>W2110010874 ARXR01000019 Gammaproteobacteria Alcanivorax venustensis ISO4 [ARXR] 33488 33412 - Arg TCT [ENA] ¡û
>C211324708 CP073758 Gammaproteobacteria Alcanivorax sp. [CP073758] 1749801 1749877 + Arg TCT - ¡û
>W1610917162 LSMO01000086 Gammaproteobacteria Alcanivorax sp. Nap_24 [LSMO] 10007 10083 + Arg TCT [ENA] ¡û
>W1611008419 LXTS01001220 Gammaproteobacteria Alcanivorax sp. CP2C [LXTS] 1754 1830 + Arg TCT [ENA] ¡û
Identical group No.359853 (2 seq.)
>W2011964418 VBRY01000013 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 77496 77420 - Arg TCT [ENA] ¡û
>W2011964435 VBRZ01000002 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 161429 161505 + Arg TCT [ENA] ¡û
Identical group No.360338 (2 seq.)
>W2011396400 RCFQ01000006 Candidatius Mariprofundia Mariprofundus sp. EBB-1 [RCFQ] 15157 15081 - Arg TCT [ENA] ¡û
>W2012196139 VWNC01000002 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 4145 4069 - Arg TCT [ENA] ¡û
Identical group No.397089 (4 seq.)
>W131164462 ARAU01000010 Zetaproteobacteria Mariprofundus ferrooxydans M34 [ARAU] 59160 59084 - Arg TCT [ENA] ¡û
>w018936 AATS01000004 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 11533 11460 - Arg TCT [ENA] ¡û
>W2010572259 JAAVJJ010000005 Candidatius Mariprofundia Mariprofundus ferrooxydans O-1 [JAAVJJ] 291638 291714 + Arg TCT [ENA] ¡û
>W1710759490 LIGC01000003 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 71941 72017 + Arg TCT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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