tRNA genes clustered and arranged according to each identical group

Candidatius Mariprofundia

Anticodon = TGC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.525649 (50 seq.)
>W131164226 ARAK01000206 Zetaproteobacteria zeta proteobacterium SCGC AB-137-C09 [ARAK] 1746 1821 + Ala TGC [ENA] ¡û
>W131164257 ARAN01000102 Zetaproteobacteria zeta proteobacterium SCGC AB-133-C04 [ARAN] 3867 3792 - Ala TGC [ENA] ¡û
>W131164274 ARAO01000086 Zetaproteobacteria zeta proteobacterium SCGC AB-137-I08 [ARAO] 361 436 + Ala TGC [ENA] ¡û
>W131164300 ARAO01000235 Zetaproteobacteria zeta proteobacterium SCGC AB-137-I08 [ARAO] 42113 42038 - Ala TGC [ENA] ¡û
>W131164319 ARAP01000143 Zetaproteobacteria zeta proteobacterium SCGC AB-133-G06 [ARAP] 1583 1658 + Ala TGC [ENA] ¡û
>C007873 CR522870 Thermodesulfobacteriota Desulfotalea psychrophila LSv54 [CR522870] 808012 808087 + Ala TGC [Ensembl] ¡û
>C007914 CR522870 Thermodesulfobacteriota Desulfotalea psychrophila LSv54 [CR522870] 1462073 1461998 - Ala TGC [Ensembl] ¡û
>w018945 AATS01000006 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 162430 162507 + Ala TGC [ENA] ¡û
>w018943 AATS01000005 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 156988 156911 - Ala TGC [ENA] ¡û
>W141261791 CCBA010000039 Bacillota Bacillus sp. EB01 [CCBA] 1050 1125 + Ala TGC [ENA] ¡û
>WENV183712935 PDWI01119307 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1755 1830 + Ala TGC [ENA] ¡û
>WENV183713285 PDWI01132513 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 894 819 - Ala TGC [ENA] ¡û
>WENV183721087 PDWJ01054828 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 1522 1597 + Ala TGC [ENA] ¡û
>WENV183722128 PDWJ01107436 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 2466 2391 - Ala TGC [ENA] ¡û
>WENV170006250 AMWB02010564 [AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells 930 855 - Ala TGC [ENA] ¡û
>WENV170615043 FUWD012847277 [FUWD] metagenome; unknown 85 160 + Ala TGC [ENA] ¡û
>C181033336 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 354491 354566 + Ala TGC - ¡û
>C181033338 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 363808 363883 + Ala TGC - ¡û
>C181033417 CP018800 Zetaproteobacteria Mariprofundus ferrinatatus CP-8 [CP018800] 1916407 1916332 - Ala TGC - ¡û
>W141818935 JQLW01000005 Zetaproteobacteria Ghiorsea bivora TAG-1 [JQLW] 424991 425066 + Ala TGC [ENA] ¡û
>W141818961 JQLW01000012 Zetaproteobacteria Ghiorsea bivora TAG-1 [JQLW] 88930 89005 + Ala TGC [ENA] ¡û
>C09103729 CP001087 Thermodesulfobacteriota Desulforapulum autotrophicum HRM2 [CP001087] 3971948 3971873 - Ala TGC [Ensembl] ¡û
>SRA1025570 SRR035085.40656 454 Sequencing (SRP001806) 415 340 - Ala TGC [SRA]
>W2010151758 CAADHO010000022 Thermodesulfobacteriota Desulfoluna butyratoxydans [CAADHO] 2194 2119 - Ala TGC [ENA] ¡û
>W2010302617 CABVLC010000002 Thermodesulfobacteriota Desulfoluna spongiiphila [CABVLC] 3276868 3276943 + Ala TGC [ENA] ¡û
>W2010572264 JAAVJJ010000007 Candidatius Mariprofundia Mariprofundus ferrooxydans O-1 [JAAVJJ] 3388 3313 - Ala TGC [ENA] ¡û
>W2010653201 JACAOA010000057 Bacillota Aerococcaceae bacterium INB8 [JACAOA] 757 831 + Ala TGC [ENA] ¡û
>SRA1037902 SRR035090.216132 454 Sequencing (SRP001811) 82 157 + Ala TGC [SRA]
>SRA1038378 SRR035090.294150 454 Sequencing (SRP001811) 82 157 + Ala TGC [SRA]
>W2011396424 RCFQ01000057 Candidatius Mariprofundia Mariprofundus sp. EBB-1 [RCFQ] 3645 3570 - Ala TGC [ENA] ¡û
>W2011964424 VBRY01000020 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 2006 2081 + Ala TGC [ENA] ¡û
>W2011964464 VBRZ01000040 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 2094 2169 + Ala TGC [ENA] ¡û
>W2011985217 VDMB01000014 Thermodesulfobacteriota Desulfobotulus sp. PAR22N [VDMB] 99347 99422 + Ala TGC [ENA] ¡û
>W2012196077 VWNB01000001 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 52149 52074 - Ala TGC [ENA] ¡û
>W2012196134 VWNC01000002 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 233872 233797 - Ala TGC [ENA] ¡û
>W2012196136 VWNC01000002 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 217705 217630 - Ala TGC [ENA] ¡û
>SRA1054704 SRR035099.190446 454 Sequencing (SRP001820) 259 184 - Ala TGC [SRA]
>W2110200465 JACCEK010000005 Bacillota Aerococcaceae bacterium DSM 111021 [JACCEK] 2887 2813 - Ala TGC [ENA] ¡û
>W2110200467 JACCEK010000013 Bacillota Aerococcaceae bacterium DSM 111021 [JACCEK] 235 163 - Ala TGC [ENA] ¡û
>W2110200499 JACCEL010000057 Bacillota Facklamia tabacinasalis DSM 104272 [JACCEL] 709 783 + Ala TGC [ENA] ¡û
>W2110455410 JAEUAZ010000439 Gammaproteobacteria Shewanella sp. RCRI7 [JAEUAZ] 314 240 - Ala TGC [ENA] ¡û
>W2110504075 JAFISI010000003 Candidatius Mariprofundia Mariprofundus ferrooxydans [JAFISI] 989 1064 + Ala TGC [ENA] ¡û
>C231004670 AP024488 Thermodesulfobacteriota Desulfoluna sp. ASN36 [AP024488] 5281416 5281491 + Ala TGC - ¡û
>C231004672 AP024488 Thermodesulfobacteriota Desulfoluna sp. ASN36 [AP024488] 5292279 5292354 + Ala TGC - ¡û
>C161043027 CP012602 Bacillota Bacillus sp. FJAT-18017 [CP012602] 1583261 1583336 + Ala TGC [Ensembl] ¡û
>C161043087 CP012602 Bacillota Bacillus sp. FJAT-18017 [CP012602] 163318 163243 - Ala TGC [Ensembl] ¡û
>C131018039 FO203503 Thermodesulfobacteriota Desulfobacula toluolica Tol2 [FO203503] 2314347 2314422 + Ala TGC [Ensembl] ¡û
>W1710081277 BDFD01000003 Zetaproteobacteria Mariprofundus micogutta [BDFD] 38993 38918 - Ala TGC [ENA] ¡û
>W1710081279 BDFD01000003 Zetaproteobacteria Mariprofundus micogutta [BDFD] 31866 31791 - Ala TGC [ENA] ¡û
>W1710759527 LIGC01000031 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 3397 3322 - Ala TGC [ENA] ¡û
Identical group No.552338 (3 seq.)
>W131164244 ARAL01000103 Zetaproteobacteria zeta proteobacterium SCGC AB-137-J06 [ARAL] 4949 5024 + Ala TGC [ENA] ¡û
>WENV183715887 PDWI01270655 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 437 512 + Ala TGC [ENA] ¡û
>W2130030617 JAFISZ010000007 Candidatius Mariprofundia Mariprofundus ferrooxydans [JAFISZ] 9113 9188 + Ala TGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK