tRNA genes clustered and arranged according to each identical group

Candidatius Mariprofundia

Anticodon = TTC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.333280 (49 seq.)
>W1711583257 MNWZ01000038 Zetaproteobacteria Zetaproteobacteria bacterium CG1_02_53_45 [MNWZ] 2687 2763 + Glu TTC [ENA] ¡û
>WENV180056159 MPLW02013022 [MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter 813 737 - Glu TTC [ENA] ¡û
>WENV180056645 MPLW02048961 [MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter 359 435 + Glu TTC [ENA] ¡û
>WENV180057886 MPLX02026844 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 2525 2601 + Glu TTC [ENA] ¡û
>WENV180062336 MPLX02280793 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 1711 1787 + Glu TTC [ENA] ¡û
>WENV180063407 MPLX02352536 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 63 139 + Glu TTC [ENA] ¡û
>WENV180063413 MPLX02352714 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 63 139 + Glu TTC [ENA] ¡û
>WENV180065569 MPLY02072487 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 1811 1887 + Glu TTC [ENA] ¡û
>WENV180065986 MPLY02100906 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 113 37 - Glu TTC [ENA] ¡û
>WENV180066873 MPLY02160951 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 29 105 + Glu TTC [ENA] ¡û
>WENV180067198 MPLY02186045 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 571 495 - Glu TTC [ENA] ¡û
>WENV180069958 MPLZ02140341 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 1555 1479 - Glu TTC [ENA] ¡û
>WENV180070167 MPLZ02152659 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 4028 4104 + Glu TTC [ENA] ¡û
>WENV180070280 MPLZ02158886 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 4191 4115 - Glu TTC [ENA] ¡û
>WENV180071254 MPLZ02224255 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 911 835 - Glu TTC [ENA] ¡û
>WENV180071869 MPLZ02267601 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 48 124 + Glu TTC [ENA] ¡û
>WENV180072468 MPMA02022416 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 550 626 + Glu TTC [ENA] ¡û
>WENV180075007 MPMA02182209 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 1245 1321 + Glu TTC [ENA] ¡û
>WENV180075924 MPMA02244603 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 2 78 + Glu TTC [ENA] ¡û
>WENV180076158 MPMA02261705 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 3190 3114 - Glu TTC [ENA] ¡û
>WENV180077058 MPMB02028144 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 54 130 + Glu TTC [ENA] ¡û
>WENV180077431 MPMB02049071 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 1711 1787 + Glu TTC [ENA] ¡û
>WENV180078070 MPMB02083777 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 1942 1866 - Glu TTC [ENA] ¡û
>WENV180079414 MPMB02159729 [MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter 54 130 + Glu TTC [ENA] ¡û
>WENV180088018 MPMF02008353 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 1714 1638 - Glu TTC [ENA] ¡û
>WENV180088123 MPMF02013924 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 79 3 - Glu TTC [ENA] ¡û
>WENV180088153 MPMF02015468 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 63 139 + Glu TTC [ENA] ¡û
>WENV180088487 MPMF02031917 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 11890 11814 - Glu TTC [ENA] ¡û
>WENV180088923 MPMF02055014 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 3304 3228 - Glu TTC [ENA] ¡û
>WENV180091590 MPMF02205191 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 586 510 - Glu TTC [ENA] ¡û
>WENV180101790 OAOW01017102 [OAOW] marine metagenome; ENVO.00002110 230 306 + Glu TTC [ENA] ¡û
>WENV183794021 PVBE010061580 [PVBE] marine metagenome; water 1771 1695 - Glu TTC [ENA] ¡û
>WENV183795524 PVBE010177767 [PVBE] marine metagenome; water 63 139 + Glu TTC [ENA] ¡û
>WENV183796512 PVBE010255180 [PVBE] marine metagenome; water 63 139 + Glu TTC [ENA] ¡û
>WENV183799851 PVBE010542221 [PVBE] marine metagenome; water 79 3 - Glu TTC [ENA] ¡û
>WENV183801227 PVBE010656118 [PVBE] marine metagenome; water 1245 1321 + Glu TTC [ENA] ¡û
>WENV183809860 PVBE011425574 [PVBE] marine metagenome; water 28 104 + Glu TTC [ENA] ¡û
>WENV170277960 CERQ01040933 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1139 1215 + Glu TTC [ENA] ¡û
>WENV170607236 FUWD010791614 [FUWD] metagenome; unknown 274 198 - Glu TTC [ENA] ¡û
>WENV170613799 FUWD012820494 [FUWD] metagenome; unknown 510 586 + Glu TTC [ENA] ¡û
>WENV170613801 FUWD012820495 [FUWD] metagenome; unknown 403 479 + Glu TTC [ENA] ¡û
>WENV170619468 FUWD013014722 [FUWD] metagenome; unknown 233 309 + Glu TTC [ENA] ¡û
>WENV170627558 FUWD013233455 [FUWD] metagenome; unknown 233 309 + Glu TTC [ENA] ¡û
>WENV170882130 MDTC01144127 [MDTC] marine metagenome; seawater 729 805 + Glu TTC [ENA] ¡û
>WENV170946681 MDUS01001664 [MDUS] marine metagenome; 300 m water sample from station 6 1739 1815 + Glu TTC [ENA] ¡û
>WENV170946799 MDUS01003937 [MDUS] marine metagenome; 300 m water sample from station 6 923 847 - Glu TTC [ENA] ¡û
>C181033373 CP018799 Zetaproteobacteria Mariprofundus aestuarium CP-5 [CP018799] 1304236 1304160 - Glu TTC - ¡û
>W2012196078 VWNB01000002 Candidatius Mariprofundia Mariprofundus sp. KV [VWNB] 45687 45763 + Glu TTC [ENA] ¡û
>W2012196154 VWNC01000007 Candidatius Mariprofundia Mariprofundus sp. NF [VWNC] 8714 8790 + Glu TTC [ENA] ¡û
Identical group No.397091 (5 seq.)
>W131164445 ARAU01000001 Zetaproteobacteria Mariprofundus ferrooxydans M34 [ARAU] 353567 353643 + Glu TTC [ENA] ¡û
>w018919 AATS01000001 Zetaproteobacteria Mariprofundus ferrooxydans PV-1 [AATS] 16296 16372 + Glu TTC [ENA] ¡û
>WENV180353473 OBLQ010800392 [OBLQ] soil metagenome; soil 48 124 + Glu TTC [ENA] ¡û
>W2010572232 JAAVJJ010000001 Candidatius Mariprofundia Mariprofundus ferrooxydans O-1 [JAAVJJ] 83999 83923 - Glu TTC [ENA] ¡û
>W1710759502 LIGC01000005 Zetaproteobacteria Mariprofundus ferrooxydans [LIGC] 6991 7067 + Glu TTC [ENA] ¡û
Identical group No.568138 (53 seq.)
>WENV180058467 MPLX02055529 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 137 62 - Glu TTC [ENA] ¡û
>WENV180075458 MPMA02210335 [MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter 49 124 + Glu TTC [ENA] ¡û
>WENV180108131 OAPH01046456 [OAPH] marine metagenome; seawater 648 576 - Glu TTC [ENA] ¡û
>WENV180210300 OBAL01198336 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 171 96 - Glu TTC [ENA] ¡û
>WENV180288146 OBIL01062663 [OBIL] metagenome; hydrothermal vent 99 24 - Glu TTC [ENA] ¡û
>WENV180310026 OBJS01149157 [OBJS] beach sand metagenome; beach sand 97 172 + Glu TTC [ENA] ¡û
>WENV180381850 OBOS01031406 [OBOS] marine metagenome; ENVO 00002150 289 214 - Glu TTC [ENA] ¡û
>WENV180581260 OCMH01078246 [OCMH] metagenome; diffuse fluid 162 87 - Glu TTC [ENA] ¡û
>WENV180582386 OCMO01076595 [OCMO] metagenome; diffuse fluid 55 130 + Glu TTC [ENA] ¡û
>WENV181210526 OFBH01007683 [OFBH] metagenome; hydrothermal vent 572 647 + Glu TTC [ENA] ¡û
>WENV181305185 OFIF01012574 [OFIF] marine metagenome; seawater 116 41 - Glu TTC [ENA] ¡û
>WENV181305697 OFIH01007322 [OFIH] marine metagenome; seawater 297 222 - Glu TTC [ENA] ¡û
>WENV181307217 OFIP01005454 [OFIP] marine metagenome; seawater 308 233 - Glu TTC [ENA] ¡û
>WENV181308936 OFIU01002287 [OFIU] marine metagenome; seawater 660 585 - Glu TTC [ENA] ¡û
>WENV181310785 OFJA01005313 [OFJA] marine metagenome; seawater 141 66 - Glu TTC [ENA] ¡û
>WENV181316601 OFJU01018978 [OFJU] marine metagenome; seawater 231 156 - Glu TTC [ENA] ¡û
>WENV181318996 OFKC01002423 [OFKC] marine metagenome; seawater 542 617 + Glu TTC [ENA] ¡û
>WENV181417079 OGCL01221993 [OGCL] hot springs metagenome; Hot spring water 445 370 - Glu TTC [ENA] ¡û
>WENV182541107 OJAQ01013162 [OJAQ] seawater metagenome; Sea water 452 377 - Glu TTC [ENA] ¡û
>WENV182582990 OJHC01006878 [OJHC] seawater metagenome; Sea water 51 126 + Glu TTC [ENA] ¡û
>WENV183799243 PVBE010489586 [PVBE] marine metagenome; water 941 1016 + Glu TTC [ENA] ¡û
>WENV170130693 CENR01024102 [CENR] marine metagenome genome assembly TARA_018_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 339 414 + Glu TTC [ENA] ¡û
>WENV170299811 CESG01063231 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 197 272 + Glu TTC [ENA] ¡û
>WENV170333685 CESY01077062 [CESY] marine metagenome genome assembly TARA_098_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 498 423 - Glu TTC [ENA] ¡û
>WENV170336444 CETA01012029 [CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 176 101 - Glu TTC [ENA] ¡û
>WENV170374108 CETT01049926 [CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1111 1036 - Glu TTC [ENA] ¡û
>WENV170379386 CETV01123123 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 314 389 + Glu TTC [ENA] ¡û
>WENV170389595 CEUA01028543 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 542 617 + Glu TTC [ENA] ¡û
>WENV170416204 CEUL01110025 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 78 3 - Glu TTC [ENA] ¡û
>WENV170457059 CEVA01243093 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2142 2067 - Glu TTC [ENA] ¡û
>WENV170478271 CEVK01029904 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 332 407 + Glu TTC [ENA] ¡û
>WENV170490816 CEVQ01020696 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 183 108 - Glu TTC [ENA] ¡û
>WENV170537965 CEWR01041748 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5602 5527 - Glu TTC [ENA] ¡û
>WENV170729472 LULF01039627 [LULF] marine metagenome; Red Sea water column Station 169 - depth 500m 83 8 - Glu TTC [ENA] ¡û
>WENV170736135 LULL01050441 [LULL] marine metagenome; Red Sea water column Station 149 - depth 500m 34 109 + Glu TTC [ENA] ¡û
>WENV170744663 LULX01005845 [LULX] marine metagenome; Red Sea water column Station 91 - depth 500m 1716 1791 + Glu TTC [ENA] ¡û
>WENV170747897 LUMD01001435 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 2827 2752 - Glu TTC [ENA] ¡û
>WENV170748933 LUME01004790 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 574 499 - Glu TTC [ENA] ¡û
>WENV170749270 LUME01022639 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 633 708 + Glu TTC [ENA] ¡û
>WENV170752654 LUMJ01002214 [LUMJ] marine metagenome; Red Sea water column Station 22 - depth 500m 724 649 - Glu TTC [ENA] ¡û
>WENV170753991 LUMK01024022 [LUMK] marine metagenome; Red Sea water column Station 22 - depth 200m 462 537 + Glu TTC [ENA] ¡û
>WENV170762114 LUMW01001017 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 188 113 - Glu TTC [ENA] ¡û
>WENV170766676 LWDU01042397 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 9195 9270 + Glu TTC [ENA] ¡û
>WENV170771027 LXNI01000295 [LXNI] sponge metagenome; marine sponge reef 10160 10085 - Glu TTC [ENA] ¡û
>WENV170773934 LXNJ01016607 [LXNJ] sponge metagenome; marine sponge reef 2093 2168 + Glu TTC [ENA] ¡û
>WENV170797041 MDSV01173891 [MDSV] marine metagenome; seawater 7391 7316 - Glu TTC [ENA] ¡û
>WENV170813080 MDSW01193865 [MDSW] marine metagenome; seawater 2463 2388 - Glu TTC [ENA] ¡û
>WENV170892703 MDTD01041591 [MDTD] marine metagenome; seawater 3435 3510 + Glu TTC [ENA] ¡û
>W2010703685 JACHII010000004 Alphaproteobacteria Roseospira marina DSM 15113 [JACHII] 316972 316897 - Glu TTC [ENA] ¡û
>W2010728119 JACIGJ010000004 Alphaproteobacteria Roseospira marina DSM 15113 [JACIGJ] 316714 316639 - Glu TTC [ENA] ¡û
>W2011964398 VBRY01000004 Candidatius Mariprofundia Mariprofundus sp. P3 [VBRY] 30709 30634 - Glu TTC [ENA] ¡û
>W2011964447 VBRZ01000012 Candidatius Mariprofundia Mariprofundus sp. P7 [VBRZ] 21482 21407 - Glu TTC [ENA] ¡û
>W2012197261 VWPJ01000007 Alphaproteobacteria Roseospira marina DSM 15113 [VWPJ] 204628 204553 - Glu TTC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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