This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Chlorobiota
Anticodon = CTT
HIT:
23 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.320792 (2 seq.)
>W1710856776
LLZP01000041
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
4879
4803
-
Lys
CTT
[ENA]
¡û
>W1610719157
LLZP01000041
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
4879
4803
-
Lys
CTT
[ENA]
¡û
Identical group No.524859 (140 seq.)
>w006974
AAIC01000071
Chlorobiota
Chlorobium phaeobacteroides BS1 [AAIC]
6690
6618
-
Lys
CTT
[ENA]
¡û
>C08003659
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
1755996
1755924
-
Lys
CTT
[Ensembl]
¡û
>WENV170613658
FUWD012815686
[FUWD] metagenome; unknown
12233
12306
+
Lys
CTT
[ENA]
¡û
>W1810062225
PDNY01000010
Chlorobiota
Prosthecochloris sp. ZM_2 [PDNY]
54273
54199
-
Lys
CTT
[ENA]
¡û
>SRA1016952
SRR035082.58643
454 Sequencing (SRP001803)
84
157
+
Lys
CTT
[SRA]
>SRA1017381
SRR035082.130721
454 Sequencing (SRP001803)
200
127
-
Lys
CTT
[SRA]
>SRA1019962
SRR035083.30863
454 Sequencing (SRP001804)
342
415
+
Lys
CTT
[SRA]
>SRA1020027
SRR035083.43457
454 Sequencing (SRP001804)
179
252
+
Lys
CTT
[SRA]
>SRA1020164
SRR035083.65147
454 Sequencing (SRP001804)
304
231
-
Lys
CTT
[SRA]
>SRA1020176
SRR035083.67271
454 Sequencing (SRP001804)
180
107
-
Lys
CTT
[SRA]
>SRA1020198
SRR035083.73283
454 Sequencing (SRP001804)
152
79
-
Lys
CTT
[SRA]
>SRA1020270
SRR035083.87090
454 Sequencing (SRP001804)
330
403
+
Lys
CTT
[SRA]
>SRA1020281
SRR035083.88933
454 Sequencing (SRP001804)
116
189
+
Lys
CTT
[SRA]
>SRA1020314
SRR035083.95717
454 Sequencing (SRP001804)
341
268
-
Lys
CTT
[SRA]
>SRA1020319
SRR035083.96415
454 Sequencing (SRP001804)
99
26
-
Lys
CTT
[SRA]
>SRA1020321
SRR035083.96451
454 Sequencing (SRP001804)
114
187
+
Lys
CTT
[SRA]
>SRA1020385
SRR035083.105789
454 Sequencing (SRP001804)
498
425
-
Lys
CTT
[SRA]
>SRA1020495
SRR035083.122871
454 Sequencing (SRP001804)
52
125
+
Lys
CTT
[SRA]
>SRA1020496
SRR035083.123068
454 Sequencing (SRP001804)
385
458
+
Lys
CTT
[SRA]
>SRA1020548
SRR035083.133421
454 Sequencing (SRP001804)
58
131
+
Lys
CTT
[SRA]
>SRA1020589
SRR035083.138486
454 Sequencing (SRP001804)
330
403
+
Lys
CTT
[SRA]
>SRA1020592
SRR035083.138545
454 Sequencing (SRP001804)
150
77
-
Lys
CTT
[SRA]
>SRA1020677
SRR035083.151051
454 Sequencing (SRP001804)
115
188
+
Lys
CTT
[SRA]
>SRA1020693
SRR035083.152222
454 Sequencing (SRP001804)
267
194
-
Lys
CTT
[SRA]
>SRA1020938
SRR035083.188053
454 Sequencing (SRP001804)
52
125
+
Lys
CTT
[SRA]
>SRA1020978
SRR035083.192470
454 Sequencing (SRP001804)
330
403
+
Lys
CTT
[SRA]
>SRA1021026
SRR035083.199667
454 Sequencing (SRP001804)
341
268
-
Lys
CTT
[SRA]
>SRA1021068
SRR035083.205028
454 Sequencing (SRP001804)
324
397
+
Lys
CTT
[SRA]
>SRA1021115
SRR035083.209773
454 Sequencing (SRP001804)
125
52
-
Lys
CTT
[SRA]
>SRA1021122
SRR035083.211817
454 Sequencing (SRP001804)
19
92
+
Lys
CTT
[SRA]
>SRA1021134
SRR035083.213418
454 Sequencing (SRP001804)
115
188
+
Lys
CTT
[SRA]
>SRA1021140
SRR035083.213845
454 Sequencing (SRP001804)
309
236
-
Lys
CTT
[SRA]
>SRA1021273
SRR035083.234308
454 Sequencing (SRP001804)
372
299
-
Lys
CTT
[SRA]
>SRA1021280
SRR035083.235391
454 Sequencing (SRP001804)
50
123
+
Lys
CTT
[SRA]
>SRA1021389
SRR035083.253765
454 Sequencing (SRP001804)
331
404
+
Lys
CTT
[SRA]
>SRA1021539
SRR035083.270802
454 Sequencing (SRP001804)
71
144
+
Lys
CTT
[SRA]
>SRA1021602
SRR035083.279334
454 Sequencing (SRP001804)
94
167
+
Lys
CTT
[SRA]
>SRA1021636
SRR035083.284128
454 Sequencing (SRP001804)
115
188
+
Lys
CTT
[SRA]
>SRA1021642
SRR035083.286050
454 Sequencing (SRP001804)
116
189
+
Lys
CTT
[SRA]
>SRA1021678
SRR035083.291714
454 Sequencing (SRP001804)
115
188
+
Lys
CTT
[SRA]
>SRA1021687
SRR035083.292579
454 Sequencing (SRP001804)
185
258
+
Lys
CTT
[SRA]
>SRA1021768
SRR035083.306620
454 Sequencing (SRP001804)
372
299
-
Lys
CTT
[SRA]
>SRA1021877
SRR035083.322065
454 Sequencing (SRP001804)
194
121
-
Lys
CTT
[SRA]
>SRA1021914
SRR035083.327270
454 Sequencing (SRP001804)
376
303
-
Lys
CTT
[SRA]
>SRA1021999
SRR035083.336714
454 Sequencing (SRP001804)
430
503
+
Lys
CTT
[SRA]
>SRA1022101
SRR035083.353675
454 Sequencing (SRP001804)
410
483
+
Lys
CTT
[SRA]
>SRA1022117
SRR035083.355546
454 Sequencing (SRP001804)
116
189
+
Lys
CTT
[SRA]
>SRA1022130
SRR035083.356598
454 Sequencing (SRP001804)
441
368
-
Lys
CTT
[SRA]
>SRA1022205
SRR035083.367730
454 Sequencing (SRP001804)
99
26
-
Lys
CTT
[SRA]
>SRA1022221
SRR035083.369888
454 Sequencing (SRP001804)
320
393
+
Lys
CTT
[SRA]
>SRA1022326
SRR035083.390020
454 Sequencing (SRP001804)
316
243
-
Lys
CTT
[SRA]
>SRA1022410
SRR035083.402131
454 Sequencing (SRP001804)
161
234
+
Lys
CTT
[SRA]
>SRA1022452
SRR035083.406945
454 Sequencing (SRP001804)
354
427
+
Lys
CTT
[SRA]
>SRA1022524
SRR035083.420553
454 Sequencing (SRP001804)
363
290
-
Lys
CTT
[SRA]
>SRA1022575
SRR035083.427169
454 Sequencing (SRP001804)
237
164
-
Lys
CTT
[SRA]
>SRA1022624
SRR035083.434374
454 Sequencing (SRP001804)
19
92
+
Lys
CTT
[SRA]
>SRA1022765
SRR035083.456480
454 Sequencing (SRP001804)
341
268
-
Lys
CTT
[SRA]
>SRA1022798
SRR035083.462120
454 Sequencing (SRP001804)
63
136
+
Lys
CTT
[SRA]
>SRA1022804
SRR035083.463356
454 Sequencing (SRP001804)
380
453
+
Lys
CTT
[SRA]
>SRA1022835
SRR035083.469187
454 Sequencing (SRP001804)
146
73
-
Lys
CTT
[SRA]
>SRA1022844
SRR035083.472006
454 Sequencing (SRP001804)
189
116
-
Lys
CTT
[SRA]
>SRA1022875
SRR035083.476888
454 Sequencing (SRP001804)
20
93
+
Lys
CTT
[SRA]
>SRA1022899
SRR035083.481660
454 Sequencing (SRP001804)
219
146
-
Lys
CTT
[SRA]
>SRA1022938
SRR035083.490753
454 Sequencing (SRP001804)
166
239
+
Lys
CTT
[SRA]
>SRA1023042
SRR035083.510867
454 Sequencing (SRP001804)
334
261
-
Lys
CTT
[SRA]
>SRA1031784
SRR035087.486019
454 Sequencing (SRP001808)
159
86
-
Lys
CTT
[SRA]
>SRA1032304
SRR035087.598681
454 Sequencing (SRP001808)
158
85
-
Lys
CTT
[SRA]
>SRA1032619
SRR035088.65227
454 Sequencing (SRP001809)
84
157
+
Lys
CTT
[SRA]
>SRA1032895
SRR035088.125015
454 Sequencing (SRP001809)
9
82
+
Lys
CTT
[SRA]
>SRA1033153
SRR035088.184299
454 Sequencing (SRP001809)
209
136
-
Lys
CTT
[SRA]
>SRA1033852
SRR035088.377976
454 Sequencing (SRP001809)
282
209
-
Lys
CTT
[SRA]
>SRA1033897
SRR035088.398471
454 Sequencing (SRP001809)
4
77
+
Lys
CTT
[SRA]
>SRA1034068
SRR035088.473715
454 Sequencing (SRP001809)
256
329
+
Lys
CTT
[SRA]
>SRA1036825
SRR035090.16304
454 Sequencing (SRP001811)
176
103
-
Lys
CTT
[SRA]
>SRA1036898
SRR035090.34749
454 Sequencing (SRP001811)
272
345
+
Lys
CTT
[SRA]
>SRA1036949
SRR035090.43779
454 Sequencing (SRP001811)
196
123
-
Lys
CTT
[SRA]
>W2010640186
JABVZQ010000007
Chlorobiota
Prosthecochloris sp. DSM 1685 [JABVZQ]
97519
97445
-
Lys
CTT
[ENA]
¡û
>SRA1037021
SRR035090.60200
454 Sequencing (SRP001811)
176
103
-
Lys
CTT
[SRA]
>SRA1037030
SRR035090.61580
454 Sequencing (SRP001811)
357
430
+
Lys
CTT
[SRA]
>SRA1037034
SRR035090.62021
454 Sequencing (SRP001811)
271
344
+
Lys
CTT
[SRA]
>SRA1037038
SRR035090.62530
454 Sequencing (SRP001811)
270
343
+
Lys
CTT
[SRA]
>SRA1037053
SRR035090.66169
454 Sequencing (SRP001811)
372
445
+
Lys
CTT
[SRA]
>SRA1037098
SRR035090.73370
454 Sequencing (SRP001811)
190
263
+
Lys
CTT
[SRA]
>SRA1037199
SRR035090.92099
454 Sequencing (SRP001811)
177
104
-
Lys
CTT
[SRA]
>SRA1037209
SRR035090.93047
454 Sequencing (SRP001811)
273
346
+
Lys
CTT
[SRA]
>SRA1037267
SRR035090.105353
454 Sequencing (SRP001811)
253
180
-
Lys
CTT
[SRA]
>SRA1037308
SRR035090.110765
454 Sequencing (SRP001811)
176
103
-
Lys
CTT
[SRA]
>SRA1037496
SRR035090.142823
454 Sequencing (SRP001811)
273
346
+
Lys
CTT
[SRA]
>SRA1037605
SRR035090.162319
454 Sequencing (SRP001811)
220
293
+
Lys
CTT
[SRA]
>SRA1037706
SRR035090.177221
454 Sequencing (SRP001811)
144
71
-
Lys
CTT
[SRA]
>SRA1037733
SRR035090.183373
454 Sequencing (SRP001811)
196
123
-
Lys
CTT
[SRA]
>SRA1037760
SRR035090.189877
454 Sequencing (SRP001811)
178
105
-
Lys
CTT
[SRA]
>SRA1037789
SRR035090.195915
454 Sequencing (SRP001811)
209
136
-
Lys
CTT
[SRA]
>SRA1037857
SRR035090.205456
454 Sequencing (SRP001811)
273
346
+
Lys
CTT
[SRA]
>SRA1037888
SRR035090.212610
454 Sequencing (SRP001811)
189
116
-
Lys
CTT
[SRA]
>SRA1038077
SRR035090.242403
454 Sequencing (SRP001811)
209
136
-
Lys
CTT
[SRA]
>SRA1038095
SRR035090.244385
454 Sequencing (SRP001811)
133
206
+
Lys
CTT
[SRA]
>SRA1038216
SRR035090.266527
454 Sequencing (SRP001811)
81
154
+
Lys
CTT
[SRA]
>SRA1038278
SRR035090.278537
454 Sequencing (SRP001811)
236
309
+
Lys
CTT
[SRA]
>SRA1038412
SRR035090.299749
454 Sequencing (SRP001811)
146
219
+
Lys
CTT
[SRA]
>SRA1038492
SRR035090.314696
454 Sequencing (SRP001811)
133
206
+
Lys
CTT
[SRA]
>SRA1038526
SRR035090.320616
454 Sequencing (SRP001811)
146
219
+
Lys
CTT
[SRA]
>SRA1038574
SRR035090.329660
454 Sequencing (SRP001811)
177
104
-
Lys
CTT
[SRA]
>SRA1038581
SRR035090.330789
454 Sequencing (SRP001811)
151
78
-
Lys
CTT
[SRA]
>SRA1038706
SRR035090.352545
454 Sequencing (SRP001811)
200
273
+
Lys
CTT
[SRA]
>SRA1038746
SRR035090.359133
454 Sequencing (SRP001811)
355
282
-
Lys
CTT
[SRA]
>SRA1038801
SRR035090.368807
454 Sequencing (SRP001811)
345
418
+
Lys
CTT
[SRA]
>SRA1038809
SRR035090.371175
454 Sequencing (SRP001811)
200
273
+
Lys
CTT
[SRA]
>SRA1038838
SRR035090.376787
454 Sequencing (SRP001811)
200
273
+
Lys
CTT
[SRA]
>SRA1038977
SRR035090.402866
454 Sequencing (SRP001811)
148
221
+
Lys
CTT
[SRA]
>SRA1039210
SRR035090.445156
454 Sequencing (SRP001811)
165
92
-
Lys
CTT
[SRA]
>SRA1039225
SRR035090.446882
454 Sequencing (SRP001811)
263
190
-
Lys
CTT
[SRA]
>SRA1039325
SRR035090.467427
454 Sequencing (SRP001811)
199
126
-
Lys
CTT
[SRA]
>SRA1039366
SRR035090.479047
454 Sequencing (SRP001811)
196
123
-
Lys
CTT
[SRA]
>SRA1039439
SRR035090.491705
454 Sequencing (SRP001811)
144
217
+
Lys
CTT
[SRA]
>SRA1039443
SRR035090.493209
454 Sequencing (SRP001811)
232
159
-
Lys
CTT
[SRA]
>SRA1039470
SRR035090.498111
454 Sequencing (SRP001811)
200
127
-
Lys
CTT
[SRA]
>SRA1039589
SRR035090.521520
454 Sequencing (SRP001811)
111
38
-
Lys
CTT
[SRA]
>SRA1039791
SRR035090.570344
454 Sequencing (SRP001811)
114
41
-
Lys
CTT
[SRA]
>SRA1039883
SRR035090.591183
454 Sequencing (SRP001811)
317
244
-
Lys
CTT
[SRA]
>SRA1039901
SRR035090.597109
454 Sequencing (SRP001811)
377
304
-
Lys
CTT
[SRA]
>SRA1041519
SRR035091.255019
454 Sequencing (SRP001812)
17
90
+
Lys
CTT
[SRA]
>SRA1042499
SRR035091.398021
454 Sequencing (SRP001812)
356
283
-
Lys
CTT
[SRA]
>SRA1043211
SRR035092.74026
454 Sequencing (SRP001813)
485
412
-
Lys
CTT
[SRA]
>SRA1049129
SRR035095.25653
454 Sequencing (SRP001816)
140
213
+
Lys
CTT
[SRA]
>SRA1053649
SRR035098.460033
454 Sequencing (SRP001819)
105
32
-
Lys
CTT
[SRA]
>SRA1053857
SRR035098.517427
454 Sequencing (SRP001819)
105
32
-
Lys
CTT
[SRA]
>SRA1053898
SRR035098.530449
454 Sequencing (SRP001819)
158
85
-
Lys
CTT
[SRA]
>SRA1053960
SRR035099.16938
454 Sequencing (SRP001820)
97
24
-
Lys
CTT
[SRA]
>SRA1054005
SRR035099.32750
454 Sequencing (SRP001820)
165
92
-
Lys
CTT
[SRA]
>SRA1054010
SRR035099.33972
454 Sequencing (SRP001820)
120
47
-
Lys
CTT
[SRA]
>SRA1054025
SRR035099.36783
454 Sequencing (SRP001820)
11
84
+
Lys
CTT
[SRA]
>SRA1054071
SRR035099.50103
454 Sequencing (SRP001820)
402
329
-
Lys
CTT
[SRA]
>SRA1054260
SRR035099.93873
454 Sequencing (SRP001820)
151
78
-
Lys
CTT
[SRA]
>SRA1054380
SRR035099.119106
454 Sequencing (SRP001820)
260
187
-
Lys
CTT
[SRA]
>SRA1054406
SRR035099.126253
454 Sequencing (SRP001820)
260
187
-
Lys
CTT
[SRA]
>SRA1054463
SRR035099.138014
454 Sequencing (SRP001820)
402
475
+
Lys
CTT
[SRA]
>SRA1054520
SRR035099.153427
454 Sequencing (SRP001820)
151
78
-
Lys
CTT
[SRA]
>W2110315954
JADGIH010000007
Chlorobiota
Prosthecochloris ethylica N2 [JADGIH]
51286
51360
+
Lys
CTT
[ENA]
¡û
>W2110316005
JADGII010000010
Chlorobiota
Prosthecochloris ethylica N3 [JADGII]
97581
97507
-
Lys
CTT
[ENA]
¡û
Identical group No.538419 (3 seq.)
>w007159
AAIJ01000005
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
87909
87986
+
Lys
CTT
[ENA]
¡û
>C08007160
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
902019
902094
+
Lys
CTT
[Ensembl]
¡û
>W1810062194
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
1630570
1630495
-
Lys
CTT
[ENA]
¡û
Identical group No.542106 (9 seq.)
>C018268
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1250549
1250474
-
Lys
CTT
[Ensembl]
¡û
>WENV183812146
PYLN01000763
[PYLN] freshwater metagenome; meromictic lake
171
96
-
Lys
CTT
[ENA]
¡û
>W09103357
AAJD01000007
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
93248
93323
+
Lys
CTT
[ENA]
¡û
>W2011502917
RXYJ01000001
Chlorobiota
Chlorobium phaeovibrioides GrKhr17 [RXYJ]
129716
129791
+
Lys
CTT
[ENA]
¡û
>W2011502992
RXYK01000013
Chlorobiota
Chlorobium phaeovibrioides BrKhr17 [RXYK]
17699
17774
+
Lys
CTT
[ENA]
¡û
>W2011609994
SJPA01000006
Chlorobiota
Chlorobium sp. N1 [SJPA]
50494
50419
-
Lys
CTT
[ENA]
¡û
>W2012093233
VMRG01000001
Chlorobiota
Chlorobium phaeovibrioides GrTcv12 [VMRG]
1355905
1355830
-
Lys
CTT
[ENA]
¡û
>W2012440411
WUBZ01000024
Chlorobiota
Chlorobium phaeovibrioides ZM [WUBZ]
27726
27801
+
Lys
CTT
[ENA]
¡û
>C201100855
CP041698
Chlorobiota
Chlorobium phaeovibrioides PhvTcv-s14 [CP041698]
777455
777530
+
Lys
CTT
-
¡û
Identical group No.544694 (6 seq.)
>WENV181232399
OFEN01015393
[OFEN] coral metagenome; NA
685
612
-
Lys
CTT
[ENA]
¡û
>WENV181233214
OFES01000007
[OFES] coral metagenome; NA
6660
6733
+
Lys
CTT
[ENA]
¡û
>WENV181233256
OFES01000036
[OFES] coral metagenome; NA
6509
6584
+
Lys
CTT
[ENA]
¡û
>W1810062280
PDNZ01000005
Chlorobiota
Prosthecochloris marina V1 [PDNZ]
56351
56426
+
Lys
CTT
[ENA]
¡û
>C231534712
CP110622
Chlorobiota
Prosthecochloris sp. SCSIO W1103 [CP110622]
952921
952996
+
Lys
CTT
-
¡û
>C231534758
CP110623
Chlorobiota
Prosthecochloris sp. SCSIO W1101 [CP110623]
1027139
1027214
+
Lys
CTT
-
¡û
Identical group No.548209 (1 seq.)
>C08003819
CP001100
Chlorobiota
Chloroherpeton thalassium ATCC 35110 [CP001100]
2200150
2200078
-
Lys
CTT
[Ensembl]
¡û
Identical group No.548215 (1 seq.)
>C005314
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
2008096
2008021
-
Lys
CTT
[Ensembl]
¡û
Identical group No.592483 (4 seq.)
>C171060585
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
1679961
1679886
-
Lys
CTT
-
¡û
>WENV170618518
FUWD012972218
[FUWD] metagenome; unknown
24
99
+
Lys
CTT
[ENA]
¡û
>WENV170626294
FUWD013218334
[FUWD] metagenome; unknown
1523
1598
+
Lys
CTT
[ENA]
¡û
>W2011980178
VDCH01000020
Chlorobiota
Chlorobaculum thiosulfatiphilum DSM 249 [VDCH]
31689
31614
-
Lys
CTT
[ENA]
¡û
Identical group No.595766 (1 seq.)
>W141803605
JPGV01000007
Chlorobiota
[Candidatus Thermochlorobacteriaceae] bacterium GBChlB GBChlB [JPGV]
125464
125539
+
Lys
CTT
[ENA]
¡û
Identical group No.620108 (2 seq.)
>C171114020
CP020873
Chlorobiota
Prosthecochloris sp. HL-130-GSB [CP020873]
1500615
1500540
-
Lys
CTT
-
¡û
>WENV183513876
OMKS01008789
[OMKS] sediment metagenome; hot spring sediment
5633
5708
+
Lys
CTT
[ENA]
¡û
Identical group No.620693 (5 seq.)
>W1711136073
LUZT01000006
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
649920
649995
+
Lys
CTT
[ENA]
¡û
>C007018
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
717274
717349
+
Lys
CTT
[Ensembl]
¡û
>W2011543741
SDGU01000006
Chlorobiota
Chlorobaculum sp. 24CR [SDGU]
18437
18362
-
Lys
CTT
[ENA]
¡û
>C231486404
CP104202
Chlorobiota
Chlorobaculum sp. MV4-Y [CP104202]
1397180
1397105
-
Lys
CTT
-
¡û
>W1610947193
LUZT01000006
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
649920
649995
+
Lys
CTT
[ENA]
¡û
Identical group No.620712 (1 seq.)
>C08003586
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
753791
753866
+
Lys
CTT
[Ensembl]
¡û
Identical group No.620853 (1 seq.)
>C181068795
CP022571
Chlorobiota
Prosthecochloris sp. GSB1 TY Vent [CP022571]
1526972
1526897
-
Lys
CTT
-
¡û
Identical group No.626796 (4 seq.)
>W1710856737
LLZO01000279
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
742
817
+
Lys
CTT
[ENA]
¡û
>WENV181168643
OEIU01588839
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
236
163
-
Lys
CTT
[ENA]
¡û
>WENV181171974
OEIV010432288
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
24
97
+
Lys
CTT
[ENA]
¡û
>W1610719118
LLZO01000279
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
742
817
+
Lys
CTT
[ENA]
¡û
Identical group No.664440 (2 seq.)
>W1710887485
LMYZ01000066
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
8747
8672
-
Lys
CTT
[ENA]
¡û
>W1610748185
LMYZ01000066
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
8747
8672
-
Lys
CTT
[ENA]
¡û
Identical group No.666543 (2 seq.)
>C006587
CP000492
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [CP000492]
1059928
1060003
+
Lys
CTT
[Ensembl]
¡û
>W09102675
AAIB01000043
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [AAIB]
4897
4972
+
Lys
CTT
[ENA]
¡û
Identical group No.666935 (4 seq.)
>WENV170000888
AFSR01006916
[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
696
620
-
Lys
CTT
[ENA]
¡û
>WENV11101231
AFSR01006916
[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
696
620
-
Lys
CTT
[ENA]
¡û
>W1610594312
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
13874
13801
-
Lys
CTT
[ENA]
¡û
>W1710713764
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
13874
13801
-
Lys
CTT
[ENA]
¡û
Identical group No.668277 (1 seq.)
>C211198504
CP065014
Chlorobiota
Chlorobi bacterium [CP065014]
1009350
1009423
+
Lys
CTT
-
¡û
Identical group No.708511 (2 seq.)
>C171049470
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
1475110
1475035
-
Lys
CTT
-
¡û
>W2011980234
VDCI01000009
Chlorobiota
Prosthecochloris vibrioformis DSM 260 [VDCI]
37205
37130
-
Lys
CTT
[ENA]
¡û
Identical group No.743151 (3 seq.)
>W1711626068
MPJE01000011
Chlorobiota
Chlorobium sp. KB01 [MPJE]
22347
22419
+
Lys
CTT
[ENA]
¡û
>w018057
AASE01000031
Chlorobiota
Chlorobium ferrooxidans DSM 13031 [AASE]
4947
5023
+
Lys
CTT
[ENA]
¡û
>W2010532734
JAAORA010000004
Chlorobiota
Chlorobium sp. BLA1 [JAAORA]
3600
3528
-
Lys
CTT
[ENA]
¡û
Identical group No.749696 (6 seq.)
>W1710859012
LMBR01000230
Chlorobiota
Chlorobium limicola [LMBR]
1776
1702
-
Lys
CTT
[ENA]
¡û
>w006114
AAHJ01000014
Chlorobiota
Chlorobium limicola DSM 245 [AAHJ]
1674
1750
+
Lys
CTT
[ENA]
¡û
>C08003516
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
1763127
1763056
-
Lys
CTT
[Ensembl]
¡û
>WENV170620349
FUWD013030171
[FUWD] metagenome; unknown
2897
2971
+
Lys
CTT
[ENA]
¡û
>WENV170628487
FUWD013247759
[FUWD] metagenome; unknown
2897
2971
+
Lys
CTT
[ENA]
¡û
>W1610721358
LMBR01000230
Chlorobiota
Chlorobium limicola [LMBR]
1776
1702
-
Lys
CTT
[ENA]
¡û
Identical group No.754946 (4 seq.)
>W1711167310
LVWG01000027
Chlorobiota
Pelodictyon luteolum [LVWG]
3129
3203
+
Lys
CTT
[ENA]
¡û
>C016741
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
834840
834914
+
Lys
CTT
[Ensembl]
¡û
>WENV170613738
FUWD012818017
[FUWD] metagenome; unknown
36282
36208
-
Lys
CTT
[ENA]
¡û
>W1610977641
LVWG01000027
Chlorobiota
Pelodictyon luteolum [LVWG]
3129
3203
+
Lys
CTT
[ENA]
¡û
Identical group No.833132 (1 seq.)
>C08007719
CP001110
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [CP001110]
2171769
2171698
-
Lys
CTT
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK