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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Chlorobiota
Anticodon = GAC
HIT:
19 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.320786 (2 seq.)
>W1710856766
LLZP01000030
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
57121
57047
-
Val
GAC
[ENA]
¡û
>W1610719147
LLZP01000030
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
57121
57047
-
Val
GAC
[ENA]
¡û
Identical group No.321808 (151 seq.)
>W1711167319
LVWG01000031
Chlorobiota
Pelodictyon luteolum [LVWG]
78622
78696
+
Val
GAC
[ENA]
¡û
>C016735
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
595182
595255
+
Val
GAC
[Ensembl]
¡û
>WENV170613647
FUWD012815671
[FUWD] metagenome; unknown
18636
18710
+
Val
GAC
[ENA]
¡û
>WENV170613734
FUWD012818014
[FUWD] metagenome; unknown
1964
1890
-
Val
GAC
[ENA]
¡û
>WENV170613735
FUWD012818015
[FUWD] metagenome; unknown
147
73
-
Val
GAC
[ENA]
¡û
>SRA1017288
SRR035082.112299
454 Sequencing (SRP001803)
217
143
-
Val
GAC
[SRA]
>SRA1019296
SRR035082.431211
454 Sequencing (SRP001803)
178
104
-
Val
GAC
[SRA]
>SRA1019684
SRR035082.502209
454 Sequencing (SRP001803)
283
209
-
Val
GAC
[SRA]
>SRA1019858
SRR035083.7001
454 Sequencing (SRP001804)
167
241
+
Val
GAC
[SRA]
>SRA1019869
SRR035083.9702
454 Sequencing (SRP001804)
270
344
+
Val
GAC
[SRA]
>SRA1019887
SRR035083.14727
454 Sequencing (SRP001804)
57
131
+
Val
GAC
[SRA]
>SRA1019889
SRR035083.15262
454 Sequencing (SRP001804)
57
131
+
Val
GAC
[SRA]
>SRA1020078
SRR035083.54700
454 Sequencing (SRP001804)
136
210
+
Val
GAC
[SRA]
>SRA1020088
SRR035083.56608
454 Sequencing (SRP001804)
218
292
+
Val
GAC
[SRA]
>SRA1020125
SRR035083.59945
454 Sequencing (SRP001804)
279
205
-
Val
GAC
[SRA]
>SRA1020230
SRR035083.78009
454 Sequencing (SRP001804)
259
333
+
Val
GAC
[SRA]
>SRA1020396
SRR035083.108710
454 Sequencing (SRP001804)
228
302
+
Val
GAC
[SRA]
>SRA1020465
SRR035083.119425
454 Sequencing (SRP001804)
259
333
+
Val
GAC
[SRA]
>SRA1020480
SRR035083.121164
454 Sequencing (SRP001804)
34
108
+
Val
GAC
[SRA]
>SRA1020650
SRR035083.147012
454 Sequencing (SRP001804)
190
116
-
Val
GAC
[SRA]
>SRA1020705
SRR035083.153806
454 Sequencing (SRP001804)
224
150
-
Val
GAC
[SRA]
>SRA1020714
SRR035083.154654
454 Sequencing (SRP001804)
8
82
+
Val
GAC
[SRA]
>SRA1020720
SRR035083.155175
454 Sequencing (SRP001804)
292
218
-
Val
GAC
[SRA]
>SRA1021181
SRR035083.220769
454 Sequencing (SRP001804)
397
323
-
Val
GAC
[SRA]
>SRA1021182
SRR035083.220813
454 Sequencing (SRP001804)
70
144
+
Val
GAC
[SRA]
>SRA1021265
SRR035083.232727
454 Sequencing (SRP001804)
53
127
+
Val
GAC
[SRA]
>SRA1021362
SRR035083.250041
454 Sequencing (SRP001804)
64
138
+
Val
GAC
[SRA]
>SRA1021453
SRR035083.260904
454 Sequencing (SRP001804)
75
149
+
Val
GAC
[SRA]
>SRA1021481
SRR035083.264297
454 Sequencing (SRP001804)
8
82
+
Val
GAC
[SRA]
>SRA1021554
SRR035083.272484
454 Sequencing (SRP001804)
189
115
-
Val
GAC
[SRA]
>SRA1021660
SRR035083.288675
454 Sequencing (SRP001804)
243
317
+
Val
GAC
[SRA]
>SRA1021736
SRR035083.299260
454 Sequencing (SRP001804)
340
266
-
Val
GAC
[SRA]
>SRA1021910
SRR035083.326946
454 Sequencing (SRP001804)
148
222
+
Val
GAC
[SRA]
>SRA1021971
SRR035083.333000
454 Sequencing (SRP001804)
220
294
+
Val
GAC
[SRA]
>SRA1022025
SRR035083.340649
454 Sequencing (SRP001804)
290
216
-
Val
GAC
[SRA]
>SRA1022053
SRR035083.346584
454 Sequencing (SRP001804)
21
95
+
Val
GAC
[SRA]
>SRA1022091
SRR035083.351211
454 Sequencing (SRP001804)
39
113
+
Val
GAC
[SRA]
>SRA1022116
SRR035083.355354
454 Sequencing (SRP001804)
41
115
+
Val
GAC
[SRA]
>SRA1022140
SRR035083.358139
454 Sequencing (SRP001804)
39
113
+
Val
GAC
[SRA]
>SRA1022158
SRR035083.360921
454 Sequencing (SRP001804)
229
303
+
Val
GAC
[SRA]
>SRA1022161
SRR035083.361272
454 Sequencing (SRP001804)
244
318
+
Val
GAC
[SRA]
>SRA1022166
SRR035083.362122
454 Sequencing (SRP001804)
280
354
+
Val
GAC
[SRA]
>SRA1022256
SRR035083.376233
454 Sequencing (SRP001804)
231
305
+
Val
GAC
[SRA]
>SRA1022357
SRR035083.395789
454 Sequencing (SRP001804)
266
340
+
Val
GAC
[SRA]
>SRA1022370
SRR035083.397565
454 Sequencing (SRP001804)
99
173
+
Val
GAC
[SRA]
>SRA1022522
SRR035083.420175
454 Sequencing (SRP001804)
179
105
-
Val
GAC
[SRA]
>SRA1022556
SRR035083.423549
454 Sequencing (SRP001804)
355
281
-
Val
GAC
[SRA]
>SRA1022612
SRR035083.432464
454 Sequencing (SRP001804)
271
197
-
Val
GAC
[SRA]
>SRA1022642
SRR035083.436355
454 Sequencing (SRP001804)
157
231
+
Val
GAC
[SRA]
>SRA1022661
SRR035083.438852
454 Sequencing (SRP001804)
220
294
+
Val
GAC
[SRA]
>SRA1022665
SRR035083.439328
454 Sequencing (SRP001804)
354
428
+
Val
GAC
[SRA]
>SRA1022790
SRR035083.461346
454 Sequencing (SRP001804)
150
224
+
Val
GAC
[SRA]
>SRA1022873
SRR035083.476800
454 Sequencing (SRP001804)
260
186
-
Val
GAC
[SRA]
>SRA1022991
SRR035083.501347
454 Sequencing (SRP001804)
147
221
+
Val
GAC
[SRA]
>SRA1023008
SRR035083.504058
454 Sequencing (SRP001804)
264
190
-
Val
GAC
[SRA]
>SRA1023026
SRR035083.507399
454 Sequencing (SRP001804)
352
426
+
Val
GAC
[SRA]
>SRA1028789
SRR035087.7305
454 Sequencing (SRP001808)
101
27
-
Val
GAC
[SRA]
>SRA1032592
SRR035088.57261
454 Sequencing (SRP001809)
233
159
-
Val
GAC
[SRA]
>SRA1032860
SRR035088.117202
454 Sequencing (SRP001809)
226
152
-
Val
GAC
[SRA]
>SRA1032918
SRR035088.129022
454 Sequencing (SRP001809)
63
137
+
Val
GAC
[SRA]
>SRA1033108
SRR035088.175973
454 Sequencing (SRP001809)
85
11
-
Val
GAC
[SRA]
>SRA1033253
SRR035088.207757
454 Sequencing (SRP001809)
483
409
-
Val
GAC
[SRA]
>SRA1033320
SRR035088.223302
454 Sequencing (SRP001809)
157
231
+
Val
GAC
[SRA]
>SRA1033338
SRR035088.228566
454 Sequencing (SRP001809)
375
449
+
Val
GAC
[SRA]
>SRA1033410
SRR035088.249129
454 Sequencing (SRP001809)
356
282
-
Val
GAC
[SRA]
>SRA1033925
SRR035088.410454
454 Sequencing (SRP001809)
334
260
-
Val
GAC
[SRA]
>SRA1035162
SRR035089.250312
454 Sequencing (SRP001810)
89
163
+
Val
GAC
[SRA]
>SRA1035494
SRR035089.317662
454 Sequencing (SRP001810)
193
267
+
Val
GAC
[SRA]
>SRA1036792
SRR035090.5996
454 Sequencing (SRP001811)
128
202
+
Val
GAC
[SRA]
>SRA1036794
SRR035090.7782
454 Sequencing (SRP001811)
277
351
+
Val
GAC
[SRA]
>SRA1036882
SRR035090.31167
454 Sequencing (SRP001811)
44
118
+
Val
GAC
[SRA]
>SRA1036966
SRR035090.48264
454 Sequencing (SRP001811)
258
184
-
Val
GAC
[SRA]
>SRA1036998
SRR035090.55679
454 Sequencing (SRP001811)
261
187
-
Val
GAC
[SRA]
>SRA1037003
SRR035090.56831
454 Sequencing (SRP001811)
220
294
+
Val
GAC
[SRA]
>SRA1037040
SRR035090.62810
454 Sequencing (SRP001811)
74
148
+
Val
GAC
[SRA]
>SRA1037069
SRR035090.69483
454 Sequencing (SRP001811)
238
312
+
Val
GAC
[SRA]
>SRA1037151
SRR035090.83052
454 Sequencing (SRP001811)
462
388
-
Val
GAC
[SRA]
>SRA1037184
SRR035090.89488
454 Sequencing (SRP001811)
205
131
-
Val
GAC
[SRA]
>SRA1037241
SRR035090.100839
454 Sequencing (SRP001811)
67
141
+
Val
GAC
[SRA]
>SRA1037281
SRR035090.106788
454 Sequencing (SRP001811)
221
295
+
Val
GAC
[SRA]
>SRA1037302
SRR035090.110178
454 Sequencing (SRP001811)
219
293
+
Val
GAC
[SRA]
>SRA1037318
SRR035090.112850
454 Sequencing (SRP001811)
347
421
+
Val
GAC
[SRA]
>SRA1037319
SRR035090.113051
454 Sequencing (SRP001811)
218
292
+
Val
GAC
[SRA]
>SRA1037335
SRR035090.118405
454 Sequencing (SRP001811)
219
293
+
Val
GAC
[SRA]
>SRA1037508
SRR035090.144013
454 Sequencing (SRP001811)
141
67
-
Val
GAC
[SRA]
>SRA1037525
SRR035090.147416
454 Sequencing (SRP001811)
197
123
-
Val
GAC
[SRA]
>SRA1037543
SRR035090.151296
454 Sequencing (SRP001811)
82
8
-
Val
GAC
[SRA]
>SRA1037560
SRR035090.154980
454 Sequencing (SRP001811)
305
231
-
Val
GAC
[SRA]
>SRA1037602
SRR035090.161191
454 Sequencing (SRP001811)
240
314
+
Val
GAC
[SRA]
>SRA1037635
SRR035090.166065
454 Sequencing (SRP001811)
320
394
+
Val
GAC
[SRA]
>SRA1037781
SRR035090.193467
454 Sequencing (SRP001811)
243
317
+
Val
GAC
[SRA]
>SRA1037824
SRR035090.201788
454 Sequencing (SRP001811)
90
164
+
Val
GAC
[SRA]
>SRA1037899
SRR035090.215913
454 Sequencing (SRP001811)
244
318
+
Val
GAC
[SRA]
>SRA1037916
SRR035090.218009
454 Sequencing (SRP001811)
388
314
-
Val
GAC
[SRA]
>SRA1037928
SRR035090.219893
454 Sequencing (SRP001811)
220
294
+
Val
GAC
[SRA]
>SRA1037984
SRR035090.230244
454 Sequencing (SRP001811)
255
329
+
Val
GAC
[SRA]
>SRA1038002
SRR035090.232447
454 Sequencing (SRP001811)
390
316
-
Val
GAC
[SRA]
>SRA1038023
SRR035090.235119
454 Sequencing (SRP001811)
25
99
+
Val
GAC
[SRA]
>SRA1038086
SRR035090.243384
454 Sequencing (SRP001811)
141
215
+
Val
GAC
[SRA]
>SRA1038210
SRR035090.265552
454 Sequencing (SRP001811)
131
57
-
Val
GAC
[SRA]
>SRA1038269
SRR035090.277514
454 Sequencing (SRP001811)
141
67
-
Val
GAC
[SRA]
>SRA1038338
SRR035090.289692
454 Sequencing (SRP001811)
413
339
-
Val
GAC
[SRA]
>SRA1038376
SRR035090.294022
454 Sequencing (SRP001811)
102
176
+
Val
GAC
[SRA]
>SRA1038475
SRR035090.312698
454 Sequencing (SRP001811)
255
329
+
Val
GAC
[SRA]
>SRA1038479
SRR035090.313357
454 Sequencing (SRP001811)
254
328
+
Val
GAC
[SRA]
>SRA1038505
SRR035090.317542
454 Sequencing (SRP001811)
299
373
+
Val
GAC
[SRA]
>SRA1038530
SRR035090.321239
454 Sequencing (SRP001811)
140
214
+
Val
GAC
[SRA]
>SRA1038575
SRR035090.329834
454 Sequencing (SRP001811)
120
46
-
Val
GAC
[SRA]
>SRA1038590
SRR035090.333063
454 Sequencing (SRP001811)
84
158
+
Val
GAC
[SRA]
>SRA1038820
SRR035090.372380
454 Sequencing (SRP001811)
141
215
+
Val
GAC
[SRA]
>SRA1038839
SRR035090.377269
454 Sequencing (SRP001811)
184
257
+
Val
GAC
[SRA]
>SRA1038857
SRR035090.381317
454 Sequencing (SRP001811)
371
445
+
Val
GAC
[SRA]
>SRA1038969
SRR035090.402190
454 Sequencing (SRP001811)
200
274
+
Val
GAC
[SRA]
>SRA1039038
SRR035090.412568
454 Sequencing (SRP001811)
164
90
-
Val
GAC
[SRA]
>SRA1039050
SRR035090.416605
454 Sequencing (SRP001811)
54
128
+
Val
GAC
[SRA]
>SRA1039094
SRR035090.423397
454 Sequencing (SRP001811)
253
327
+
Val
GAC
[SRA]
>SRA1039137
SRR035090.430478
454 Sequencing (SRP001811)
117
191
+
Val
GAC
[SRA]
>SRA1039186
SRR035090.438973
454 Sequencing (SRP001811)
260
334
+
Val
GAC
[SRA]
>SRA1039290
SRR035090.459823
454 Sequencing (SRP001811)
255
329
+
Val
GAC
[SRA]
>SRA1039300
SRR035090.462375
454 Sequencing (SRP001811)
131
57
-
Val
GAC
[SRA]
>SRA1039599
SRR035090.525531
454 Sequencing (SRP001811)
288
362
+
Val
GAC
[SRA]
>SRA1039604
SRR035090.526833
454 Sequencing (SRP001811)
442
368
-
Val
GAC
[SRA]
>SRA1039607
SRR035090.528570
454 Sequencing (SRP001811)
330
404
+
Val
GAC
[SRA]
>SRA1039615
SRR035090.530061
454 Sequencing (SRP001811)
82
8
-
Val
GAC
[SRA]
>SRA1039723
SRR035090.553821
454 Sequencing (SRP001811)
234
160
-
Val
GAC
[SRA]
>SRA1039749
SRR035090.559092
454 Sequencing (SRP001811)
356
430
+
Val
GAC
[SRA]
>SRA1039756
SRR035090.560607
454 Sequencing (SRP001811)
242
316
+
Val
GAC
[SRA]
>SRA1039769
SRR035090.565416
454 Sequencing (SRP001811)
159
85
-
Val
GAC
[SRA]
>SRA1039928
SRR035090.605451
454 Sequencing (SRP001811)
45
119
+
Val
GAC
[SRA]
>SRA1039933
SRR035090.606242
454 Sequencing (SRP001811)
267
193
-
Val
GAC
[SRA]
>SRA1041110
SRR035091.197949
454 Sequencing (SRP001812)
134
208
+
Val
GAC
[SRA]
>SRA1041695
SRR035091.280105
454 Sequencing (SRP001812)
300
226
-
Val
GAC
[SRA]
>SRA1042048
SRR035091.332518
454 Sequencing (SRP001812)
239
313
+
Val
GAC
[SRA]
>SRA1042608
SRR035091.415098
454 Sequencing (SRP001812)
238
312
+
Val
GAC
[SRA]
>SRA1044861
SRR035092.360163
454 Sequencing (SRP001813)
167
241
+
Val
GAC
[SRA]
>SRA1045257
SRR035093.44164
454 Sequencing (SRP001814)
62
136
+
Val
GAC
[SRA]
>SRA1045674
SRR035093.146635
454 Sequencing (SRP001814)
192
266
+
Val
GAC
[SRA]
>SRA1046332
SRR035093.281203
454 Sequencing (SRP001814)
293
367
+
Val
GAC
[SRA]
>SRA1046378
SRR035093.292824
454 Sequencing (SRP001814)
260
186
-
Val
GAC
[SRA]
>W2011609985
SJPA01000004
Chlorobiota
Chlorobium sp. N1 [SJPA]
177652
177726
+
Val
GAC
[ENA]
¡û
>SRA1047315
SRR035093.508419
454 Sequencing (SRP001814)
310
236
-
Val
GAC
[SRA]
>SRA1047442
SRR035093.541427
454 Sequencing (SRP001814)
355
429
+
Val
GAC
[SRA]
>SRA1049343
SRR035095.60341
454 Sequencing (SRP001816)
342
268
-
Val
GAC
[SRA]
>SRA1053935
SRR035099.7832
454 Sequencing (SRP001820)
199
125
-
Val
GAC
[SRA]
>SRA1053950
SRR035099.14971
454 Sequencing (SRP001820)
147
221
+
Val
GAC
[SRA]
>SRA1053982
SRR035099.25241
454 Sequencing (SRP001820)
54
128
+
Val
GAC
[SRA]
>SRA1054101
SRR035099.56856
454 Sequencing (SRP001820)
150
76
-
Val
GAC
[SRA]
>SRA1054570
SRR035099.165994
454 Sequencing (SRP001820)
244
318
+
Val
GAC
[SRA]
>SRA1054590
SRR035099.169535
454 Sequencing (SRP001820)
359
433
+
Val
GAC
[SRA]
>SRA1054834
SRR035099.226997
454 Sequencing (SRP001820)
149
75
-
Val
GAC
[SRA]
>W1610977650
LVWG01000031
Chlorobiota
Pelodictyon luteolum [LVWG]
78622
78696
+
Val
GAC
[ENA]
¡û
Identical group No.323857 (5 seq.)
>W1711626094
MPJE01000080
Chlorobiota
Chlorobium sp. KB01 [MPJE]
289
215
-
Val
GAC
[ENA]
¡û
>w018032
AASE01000007
Chlorobiota
Chlorobium ferrooxidans DSM 13031 [AASE]
96225
96149
-
Val
GAC
[ENA]
¡û
>w007183
AAIK01000003
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [AAIK]
114749
114825
+
Val
GAC
[ENA]
¡û
>C08007690
CP001110
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [CP001110]
822242
822316
+
Val
GAC
[Ensembl]
¡û
>W2010532707
JAAORA010000001
Chlorobiota
Chlorobium sp. BLA1 [JAAORA]
80312
80237
-
Val
GAC
[ENA]
¡û
Identical group No.334087 (10 seq.)
>C171113996
CP020873
Chlorobiota
Prosthecochloris sp. HL-130-GSB [CP020873]
606673
606749
+
Val
GAC
-
¡û
>w007164
AAIJ01000006
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
83233
83160
-
Val
GAC
[ENA]
¡û
>w006949
AAIC01000007
Chlorobiota
Chlorobium phaeobacteroides BS1 [AAIC]
47761
47688
-
Val
GAC
[ENA]
¡û
>C08007155
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
660568
660644
+
Val
GAC
[Ensembl]
¡û
>WENV183513583
OMKS01006072
[OMKS] sediment metagenome; hot spring sediment
6315
6389
+
Val
GAC
[ENA]
¡û
>W1810062189
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
1862907
1862833
-
Val
GAC
[ENA]
¡û
>W1810062248
PDNY01000037
Chlorobiota
Prosthecochloris sp. ZM_2 [PDNY]
395
321
-
Val
GAC
[ENA]
¡û
>W2010640205
JABVZQ010000016
Chlorobiota
Prosthecochloris sp. DSM 1685 [JABVZQ]
28401
28475
+
Val
GAC
[ENA]
¡û
>W2110315971
JADGIH010000014
Chlorobiota
Prosthecochloris ethylica N2 [JADGIH]
12789
12715
-
Val
GAC
[ENA]
¡û
>W2110315980
JADGII010000003
Chlorobiota
Prosthecochloris ethylica N3 [JADGII]
12842
12768
-
Val
GAC
[ENA]
¡û
Identical group No.334100 (6 seq.)
>W1710859010
LMBR01000213
Chlorobiota
Chlorobium limicola [LMBR]
495
419
-
Val
GAC
[ENA]
¡û
>w006116
AAHJ01000024
Chlorobiota
Chlorobium limicola DSM 245 [AAHJ]
31985
32063
+
Val
GAC
[ENA]
¡û
>C08003510
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
2140911
2140838
-
Val
GAC
[Ensembl]
¡û
>WENV170625085
FUWD013191482
[FUWD] metagenome; unknown
421
345
-
Val
GAC
[ENA]
¡û
>WENV170633342
FUWD013394785
[FUWD] metagenome; unknown
421
345
-
Val
GAC
[ENA]
¡û
>W1610721356
LMBR01000213
Chlorobiota
Chlorobium limicola [LMBR]
495
419
-
Val
GAC
[ENA]
¡û
Identical group No.337334 (7 seq.)
>C018241
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
653522
653595
+
Val
GAC
[Ensembl]
¡û
>W09103337
AAJD01000001
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
272328
272402
+
Val
GAC
[ENA]
¡û
>W2011502950
RXYJ01000007
Chlorobiota
Chlorobium phaeovibrioides GrKhr17 [RXYJ]
37408
37334
-
Val
GAC
[ENA]
¡û
>W2011502977
RXYK01000005
Chlorobiota
Chlorobium phaeovibrioides BrKhr17 [RXYK]
74493
74419
-
Val
GAC
[ENA]
¡û
>W2012093211
VMRG01000001
Chlorobiota
Chlorobium phaeovibrioides GrTcv12 [VMRG]
642491
642565
+
Val
GAC
[ENA]
¡û
>W2012440401
WUBZ01000017
Chlorobiota
Chlorobium phaeovibrioides ZM [WUBZ]
87
13
-
Val
GAC
[ENA]
¡û
>C201100876
CP041698
Chlorobiota
Chlorobium phaeovibrioides PhvTcv-s14 [CP041698]
1383142
1383068
-
Val
GAC
-
¡û
Identical group No.339739 (9 seq.)
>WENV181232296
OFEN01000002
[OFEN] coral metagenome; NA
43626
43700
+
Val
GAC
[ENA]
¡û
>WENV181232331
OFEN01000060
[OFEN] coral metagenome; NA
2750
2676
-
Val
GAC
[ENA]
¡û
>WENV181233230
OFES01000016
[OFES] coral metagenome; NA
28854
28929
+
Val
GAC
[ENA]
¡û
>WENV181233236
OFES01000018
[OFES] coral metagenome; NA
53731
53657
-
Val
GAC
[ENA]
¡û
>WENV181303855
OFHR01000012
[OFHR] coral metagenome; NA
43626
43700
+
Val
GAC
[ENA]
¡û
>WENV181303870
OFHR01000044
[OFHR] coral metagenome; NA
1456
1382
-
Val
GAC
[ENA]
¡û
>W1810062271
PDNZ01000004
Chlorobiota
Prosthecochloris marina V1 [PDNZ]
303937
303862
-
Val
GAC
[ENA]
¡û
>C231534731
CP110622
Chlorobiota
Prosthecochloris sp. SCSIO W1103 [CP110622]
1925141
1925067
-
Val
GAC
-
¡û
>C231534777
CP110623
Chlorobiota
Prosthecochloris sp. SCSIO W1101 [CP110623]
2072842
2072768
-
Val
GAC
-
¡û
Identical group No.343107 (5 seq.)
>W1711136064
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
242807
242731
-
Val
GAC
[ENA]
¡û
>C007012
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
421537
421610
+
Val
GAC
[Ensembl]
¡û
>C08003613
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
1626952
1626876
-
Val
GAC
[Ensembl]
¡û
>C08003827
CP001100
Chlorobiota
Chloroherpeton thalassium ATCC 35110 [CP001100]
1152167
1152093
-
Val
GAC
[Ensembl]
¡û
>W1610947184
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
242807
242731
-
Val
GAC
[ENA]
¡û
Identical group No.343120 (7 seq.)
>C171060576
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
2160234
2160160
-
Val
GAC
-
¡û
>C005326
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
206105
206029
-
Val
GAC
[Ensembl]
¡û
>WENV170625559
FUWD013200412
[FUWD] metagenome; unknown
5473
5547
+
Val
GAC
[ENA]
¡û
>WENV170633786
FUWD013402700
[FUWD] metagenome; unknown
5473
5547
+
Val
GAC
[ENA]
¡û
>W2011543752
SDGU01000018
Chlorobiota
Chlorobaculum sp. 24CR [SDGU]
4937
4863
-
Val
GAC
[ENA]
¡û
>W2011980171
VDCH01000016
Chlorobiota
Chlorobaculum thiosulfatiphilum DSM 249 [VDCH]
32284
32358
+
Val
GAC
[ENA]
¡û
>C231486375
CP104202
Chlorobiota
Chlorobaculum sp. MV4-Y [CP104202]
355722
355796
+
Val
GAC
-
¡û
Identical group No.384932 (1 seq.)
>W141803642
JPGV01000031
Chlorobiota
[Candidatus Thermochlorobacteriaceae] bacterium GBChlB GBChlB [JPGV]
42380
42306
-
Val
GAC
[ENA]
¡û
Identical group No.389386 (5 seq.)
>WENV180015386
FQKF010608010
[FQKF] soil metagenome; Soil
170
96
-
Val
GAC
[ENA]
¡û
>WENV170000799
AFSR01005078
[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
566
490
-
Val
GAC
[ENA]
¡û
>WENV11101142
AFSR01005078
[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
566
490
-
Val
GAC
[ENA]
¡û
>W1610594289
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
157895
157969
+
Val
GAC
[ENA]
¡û
>W1710713741
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
157895
157969
+
Val
GAC
[ENA]
¡û
Identical group No.396814 (2 seq.)
>W1610552308
JYPE01000012
Chlorobiota
Chlorobi bacterium OLB4 [JYPE]
34945
35021
+
Val
GAC
[ENA]
¡û
>W1710662973
JYPE01000012
Chlorobiota
Chlorobi bacterium OLB4 [JYPE]
34945
35021
+
Val
GAC
[ENA]
¡û
Identical group No.407844 (1 seq.)
>C181068789
CP022571
Chlorobiota
Prosthecochloris sp. GSB1 TY Vent [CP022571]
1801414
1801340
-
Val
GAC
-
¡û
Identical group No.444270 (3 seq.)
>W1710856729
LLZO01000173
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
12369
12295
-
Val
GAC
[ENA]
¡û
>WENV181173201
OEIV011272768
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
55
129
+
Val
GAC
[ENA]
¡û
>W1610719110
LLZO01000173
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
12369
12295
-
Val
GAC
[ENA]
¡û
Identical group No.446910 (2 seq.)
>W1710887513
LMYZ01000227
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
299
223
-
Val
GAC
[ENA]
¡û
>W1610748213
LMYZ01000227
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
299
223
-
Val
GAC
[ENA]
¡û
Identical group No.448776 (2 seq.)
>C006581
CP000492
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [CP000492]
713392
713468
+
Val
GAC
[Ensembl]
¡û
>W09102666
AAIB01000026
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [AAIB]
16365
16441
+
Val
GAC
[ENA]
¡û
Identical group No.452378 (1 seq.)
>C08003636
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
712358
712434
+
Val
GAC
[Ensembl]
¡û
Identical group No.452835 (1 seq.)
>C211198515
CP065014
Chlorobiota
Chlorobi bacterium [CP065014]
1956591
1956517
-
Val
GAC
-
¡û
Identical group No.486281 (2 seq.)
>C171049464
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
1764104
1764028
-
Val
GAC
-
¡û
>W2011980194
VDCI01000001
Chlorobiota
Prosthecochloris vibrioformis DSM 260 [VDCI]
588829
588904
+
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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