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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Chlorobiota
Anticodon = TCT
HIT:
18 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.273956 (2 seq.)
>W1710856757
LLZP01000023
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
94521
94596
+
Arg
TCT
[ENA]
¡û
>W1610719138
LLZP01000023
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
94521
94596
+
Arg
TCT
[ENA]
¡û
Identical group No.309567 (4 seq.)
>W1810090151
PGFG01000001
Bacteroidota
Thermoflavifilum aggregans DSM 27268 [PGFG]
1106059
1106133
+
Arg
TCT
[ENA]
¡û
>W1610594331
LDXS01000116
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
3
79
+
Arg
TCT
[ENA]
¡û
>W1710579466
FPCJ01000001
Bacteroidota
Thermoflavifilum thermophilum thermophila [FPCJ]
436925
436851
-
Arg
TCT
[ENA]
¡û
>W1710713783
LDXS01000116
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
3
79
+
Arg
TCT
[ENA]
¡û
Identical group No.334090 (9 seq.)
>C171049467
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
1481861
1481785
-
Arg
TCT
-
¡û
>C171114017
CP020873
Chlorobiota
Prosthecochloris sp. HL-130-GSB [CP020873]
1507359
1507283
-
Arg
TCT
-
¡û
>w007156
AAIJ01000005
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
80739
80817
+
Arg
TCT
[ENA]
¡û
>C08003656
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
1762764
1762688
-
Arg
TCT
[Ensembl]
¡û
>C08007157
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
894850
894926
+
Arg
TCT
[Ensembl]
¡û
>WENV183513448
OMKS01005044
[OMKS] sediment metagenome; hot spring sediment
8494
8568
+
Arg
TCT
[ENA]
¡û
>C181068792
CP022571
Chlorobiota
Prosthecochloris sp. GSB1 TY Vent [CP022571]
1533859
1533785
-
Arg
TCT
-
¡û
>W1810062191
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
1637594
1637520
-
Arg
TCT
[ENA]
¡û
>W2011980231
VDCI01000009
Chlorobiota
Prosthecochloris vibrioformis DSM 260 [VDCI]
43953
43879
-
Arg
TCT
[ENA]
¡û
Identical group No.339736 (8 seq.)
>WENV181237134
OFFA01158124
[OFFA] coral metagenome; NA
487
413
-
Arg
TCT
[ENA]
¡û
>W1810062235
PDNY01000023
Chlorobiota
Prosthecochloris sp. ZM_2 [PDNY]
5547
5473
-
Arg
TCT
[ENA]
¡û
>W1810062277
PDNZ01000005
Chlorobiota
Prosthecochloris marina V1 [PDNZ]
49479
49553
+
Arg
TCT
[ENA]
¡û
>W2010640202
JABVZQ010000015
Chlorobiota
Prosthecochloris sp. DSM 1685 [JABVZQ]
5499
5425
-
Arg
TCT
[ENA]
¡û
>W2110315951
JADGIH010000007
Chlorobiota
Prosthecochloris ethylica N2 [JADGIH]
43202
43276
+
Arg
TCT
[ENA]
¡û
>W2110316012
JADGII010000018
Chlorobiota
Prosthecochloris ethylica N3 [JADGII]
5441
5367
-
Arg
TCT
[ENA]
¡û
>C231534709
CP110622
Chlorobiota
Prosthecochloris sp. SCSIO W1103 [CP110622]
946042
946116
+
Arg
TCT
-
¡û
>C231534755
CP110623
Chlorobiota
Prosthecochloris sp. SCSIO W1101 [CP110623]
1020263
1020337
+
Arg
TCT
-
¡û
Identical group No.342980 (1 seq.)
>C08003803
CP001100
Chlorobiota
Chloroherpeton thalassium ATCC 35110 [CP001100]
1778963
1779037
+
Arg
TCT
[Ensembl]
¡û
Identical group No.384925 (1 seq.)
>W141803620
JPGV01000009
Chlorobiota
[Candidatus Thermochlorobacteriaceae] bacterium GBChlB GBChlB [JPGV]
93714
93640
-
Arg
TCT
[ENA]
¡û
Identical group No.396816 (2 seq.)
>W1610552311
JYPE01000013
Chlorobiota
Chlorobi bacterium OLB4 [JYPE]
60203
60129
-
Arg
TCT
[ENA]
¡û
>W1710662976
JYPE01000013
Chlorobiota
Chlorobi bacterium OLB4 [JYPE]
60203
60129
-
Arg
TCT
[ENA]
¡û
Identical group No.407707 (2 seq.)
>C007015
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
710427
710500
+
Arg
TCT
[Ensembl]
¡û
>C08003583
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
746970
747046
+
Arg
TCT
[Ensembl]
¡û
Identical group No.432323 (3 seq.)
>WENV170700705
LJSS01000279
[LJSS] hot springs metagenome; water from Lobios Hot Spring
8441
8515
+
Arg
TCT
[ENA]
¡û
>W1610594303
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
1006273
1006199
-
Arg
TCT
[ENA]
¡û
>W1710713755
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
1006273
1006199
-
Arg
TCT
[ENA]
¡û
Identical group No.444274 (2 seq.)
>W1710856738
LLZO01000327
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
10497
10571
+
Arg
TCT
[ENA]
¡û
>W1610719119
LLZO01000327
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
10497
10571
+
Arg
TCT
[ENA]
¡û
Identical group No.446900 (2 seq.)
>W1710887483
LMYZ01000044
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
1749
1675
-
Arg
TCT
[ENA]
¡û
>W1610748183
LMYZ01000044
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
1749
1675
-
Arg
TCT
[ENA]
¡û
Identical group No.450352 (1 seq.)
>C211198521
CP065014
Chlorobiota
Chlorobi bacterium [CP065014]
1751746
1751672
-
Arg
TCT
-
¡û
Identical group No.524834 (144 seq.)
>W1711167322
LVWG01000033
Chlorobiota
Pelodictyon luteolum [LVWG]
121291
121366
+
Arg
TCT
[ENA]
¡û
>C005311
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
2025421
2025346
-
Arg
TCT
[Ensembl]
¡û
>C016738
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
826422
826497
+
Arg
TCT
[Ensembl]
¡û
>C018265
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1256939
1256864
-
Arg
TCT
[Ensembl]
¡û
>WENV183812108
PYLN01000053
[PYLN] freshwater metagenome; meromictic lake
6037
5962
-
Arg
TCT
[ENA]
¡û
>WENV170613655
FUWD012815686
[FUWD] metagenome; unknown
5846
5921
+
Arg
TCT
[ENA]
¡û
>WENV170613743
FUWD012818036
[FUWD] metagenome; unknown
2081
2156
+
Arg
TCT
[ENA]
¡û
>W09103354
AAJD01000007
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
86858
86933
+
Arg
TCT
[ENA]
¡û
>SRA1016882
SRR035082.47164
454 Sequencing (SRP001803)
355
280
-
Arg
TCT
[SRA]
>SRA1018199
SRR035082.254988
454 Sequencing (SRP001803)
76
151
+
Arg
TCT
[SRA]
>SRA1019853
SRR035083.4731
454 Sequencing (SRP001804)
163
238
+
Arg
TCT
[SRA]
>SRA1019927
SRR035083.23536
454 Sequencing (SRP001804)
14
89
+
Arg
TCT
[SRA]
>SRA1019994
SRR035083.38337
454 Sequencing (SRP001804)
132
57
-
Arg
TCT
[SRA]
>SRA1020072
SRR035083.53112
454 Sequencing (SRP001804)
161
236
+
Arg
TCT
[SRA]
>SRA1020117
SRR035083.58896
454 Sequencing (SRP001804)
86
161
+
Arg
TCT
[SRA]
>SRA1020140
SRR035083.63323
454 Sequencing (SRP001804)
14
89
+
Arg
TCT
[SRA]
>SRA1020175
SRR035083.67194
454 Sequencing (SRP001804)
110
35
-
Arg
TCT
[SRA]
>SRA1020215
SRR035083.75399
454 Sequencing (SRP001804)
348
423
+
Arg
TCT
[SRA]
>SRA1020238
SRR035083.79926
454 Sequencing (SRP001804)
265
190
-
Arg
TCT
[SRA]
>SRA1020258
SRR035083.84605
454 Sequencing (SRP001804)
161
236
+
Arg
TCT
[SRA]
>SRA1020286
SRR035083.90286
454 Sequencing (SRP001804)
544
469
-
Arg
TCT
[SRA]
>SRA1020310
SRR035083.95481
454 Sequencing (SRP001804)
74
1
-
Arg
TCT
[SRA]
>SRA1020363
SRR035083.102093
454 Sequencing (SRP001804)
41
116
+
Arg
TCT
[SRA]
>SRA1020373
SRR035083.103527
454 Sequencing (SRP001804)
394
469
+
Arg
TCT
[SRA]
>SRA1020398
SRR035083.108935
454 Sequencing (SRP001804)
86
161
+
Arg
TCT
[SRA]
>SRA1020419
SRR035083.111987
454 Sequencing (SRP001804)
391
466
+
Arg
TCT
[SRA]
>SRA1020578
SRR035083.137531
454 Sequencing (SRP001804)
94
169
+
Arg
TCT
[SRA]
>SRA1020640
SRR035083.145475
454 Sequencing (SRP001804)
313
238
-
Arg
TCT
[SRA]
>SRA1020757
SRR035083.160115
454 Sequencing (SRP001804)
205
130
-
Arg
TCT
[SRA]
>SRA1020799
SRR035083.166747
454 Sequencing (SRP001804)
311
236
-
Arg
TCT
[SRA]
>SRA1020857
SRR035083.173811
454 Sequencing (SRP001804)
413
338
-
Arg
TCT
[SRA]
>SRA1020921
SRR035083.185445
454 Sequencing (SRP001804)
439
514
+
Arg
TCT
[SRA]
>SRA1020949
SRR035083.189354
454 Sequencing (SRP001804)
158
83
-
Arg
TCT
[SRA]
>SRA1021138
SRR035083.213684
454 Sequencing (SRP001804)
402
477
+
Arg
TCT
[SRA]
>SRA1021184
SRR035083.220878
454 Sequencing (SRP001804)
405
480
+
Arg
TCT
[SRA]
>SRA1021204
SRR035083.223320
454 Sequencing (SRP001804)
217
142
-
Arg
TCT
[SRA]
>SRA1021214
SRR035083.224815
454 Sequencing (SRP001804)
209
284
+
Arg
TCT
[SRA]
>SRA1021230
SRR035083.227212
454 Sequencing (SRP001804)
395
470
+
Arg
TCT
[SRA]
>SRA1021258
SRR035083.231363
454 Sequencing (SRP001804)
158
83
-
Arg
TCT
[SRA]
>SRA1021279
SRR035083.235385
454 Sequencing (SRP001804)
397
472
+
Arg
TCT
[SRA]
>SRA1021305
SRR035083.239522
454 Sequencing (SRP001804)
288
213
-
Arg
TCT
[SRA]
>SRA1021392
SRR035083.253950
454 Sequencing (SRP001804)
541
466
-
Arg
TCT
[SRA]
>SRA1021582
SRR035083.276338
454 Sequencing (SRP001804)
173
98
-
Arg
TCT
[SRA]
>SRA1021623
SRR035083.283469
454 Sequencing (SRP001804)
263
188
-
Arg
TCT
[SRA]
>SRA1021698
SRR035083.293966
454 Sequencing (SRP001804)
158
233
+
Arg
TCT
[SRA]
>SRA1021708
SRR035083.296280
454 Sequencing (SRP001804)
124
199
+
Arg
TCT
[SRA]
>SRA1021721
SRR035083.297405
454 Sequencing (SRP001804)
263
188
-
Arg
TCT
[SRA]
>SRA1021799
SRR035083.311692
454 Sequencing (SRP001804)
86
161
+
Arg
TCT
[SRA]
>SRA1021899
SRR035083.326255
454 Sequencing (SRP001804)
432
507
+
Arg
TCT
[SRA]
>SRA1021985
SRR035083.334749
454 Sequencing (SRP001804)
205
130
-
Arg
TCT
[SRA]
>SRA1022006
SRR035083.338461
454 Sequencing (SRP001804)
436
361
-
Arg
TCT
[SRA]
>SRA1022021
SRR035083.340067
454 Sequencing (SRP001804)
181
256
+
Arg
TCT
[SRA]
>SRA1022024
SRR035083.340144
454 Sequencing (SRP001804)
88
13
-
Arg
TCT
[SRA]
>SRA1022106
SRR035083.354300
454 Sequencing (SRP001804)
425
350
-
Arg
TCT
[SRA]
>SRA1022146
SRR035083.359528
454 Sequencing (SRP001804)
210
135
-
Arg
TCT
[SRA]
>SRA1022163
SRR035083.361290
454 Sequencing (SRP001804)
156
81
-
Arg
TCT
[SRA]
>SRA1022323
SRR035083.389454
454 Sequencing (SRP001804)
173
98
-
Arg
TCT
[SRA]
>SRA1022364
SRR035083.396874
454 Sequencing (SRP001804)
199
124
-
Arg
TCT
[SRA]
>SRA1022383
SRR035083.398526
454 Sequencing (SRP001804)
392
467
+
Arg
TCT
[SRA]
>SRA1022389
SRR035083.399099
454 Sequencing (SRP001804)
54
129
+
Arg
TCT
[SRA]
>SRA1022439
SRR035083.405859
454 Sequencing (SRP001804)
103
178
+
Arg
TCT
[SRA]
>SRA1022448
SRR035083.406285
454 Sequencing (SRP001804)
319
244
-
Arg
TCT
[SRA]
>SRA1022480
SRR035083.411851
454 Sequencing (SRP001804)
156
81
-
Arg
TCT
[SRA]
>SRA1022572
SRR035083.426277
454 Sequencing (SRP001804)
87
12
-
Arg
TCT
[SRA]
>SRA1022667
SRR035083.439576
454 Sequencing (SRP001804)
254
179
-
Arg
TCT
[SRA]
>SRA1022693
SRR035083.443146
454 Sequencing (SRP001804)
397
472
+
Arg
TCT
[SRA]
>SRA1022757
SRR035083.454818
454 Sequencing (SRP001804)
54
129
+
Arg
TCT
[SRA]
>SRA1022771
SRR035083.457094
454 Sequencing (SRP001804)
54
129
+
Arg
TCT
[SRA]
>SRA1022800
SRR035083.462411
454 Sequencing (SRP001804)
307
382
+
Arg
TCT
[SRA]
>SRA1022850
SRR035083.473239
454 Sequencing (SRP001804)
252
177
-
Arg
TCT
[SRA]
>SRA1022856
SRR035083.474083
454 Sequencing (SRP001804)
158
233
+
Arg
TCT
[SRA]
>SRA1022955
SRR035083.494433
454 Sequencing (SRP001804)
284
209
-
Arg
TCT
[SRA]
>SRA1023087
SRR035083.517698
454 Sequencing (SRP001804)
247
322
+
Arg
TCT
[SRA]
>SRA1026788
SRR035085.291861
454 Sequencing (SRP001806)
41
116
+
Arg
TCT
[SRA]
>SRA1029992
SRR035087.213158
454 Sequencing (SRP001808)
15
90
+
Arg
TCT
[SRA]
>SRA1032474
SRR035088.19033
454 Sequencing (SRP001809)
91
166
+
Arg
TCT
[SRA]
>SRA1032492
SRR035088.25517
454 Sequencing (SRP001809)
164
239
+
Arg
TCT
[SRA]
>SRA1032550
SRR035088.44577
454 Sequencing (SRP001809)
226
301
+
Arg
TCT
[SRA]
>SRA1033203
SRR035088.196259
454 Sequencing (SRP001809)
280
205
-
Arg
TCT
[SRA]
>SRA1033360
SRR035088.234789
454 Sequencing (SRP001809)
347
272
-
Arg
TCT
[SRA]
>SRA1033702
SRR035088.329344
454 Sequencing (SRP001809)
94
19
-
Arg
TCT
[SRA]
>SRA1033932
SRR035088.413816
454 Sequencing (SRP001809)
78
3
-
Arg
TCT
[SRA]
>SRA1034315
SRR035089.54866
454 Sequencing (SRP001810)
103
28
-
Arg
TCT
[SRA]
>SRA1035692
SRR035089.355870
454 Sequencing (SRP001810)
258
183
-
Arg
TCT
[SRA]
>SRA1036743
SRR035089.602548
454 Sequencing (SRP001810)
374
299
-
Arg
TCT
[SRA]
>SRA1036831
SRR035090.19647
454 Sequencing (SRP001811)
98
23
-
Arg
TCT
[SRA]
>SRA1036904
SRR035090.35897
454 Sequencing (SRP001811)
98
23
-
Arg
TCT
[SRA]
>SRA1036907
SRR035090.36822
454 Sequencing (SRP001811)
98
23
-
Arg
TCT
[SRA]
>SRA1036975
SRR035090.50237
454 Sequencing (SRP001811)
135
60
-
Arg
TCT
[SRA]
>SRA1036987
SRR035090.52826
454 Sequencing (SRP001811)
98
23
-
Arg
TCT
[SRA]
>SRA1037061
SRR035090.68587
454 Sequencing (SRP001811)
115
40
-
Arg
TCT
[SRA]
>SRA1037106
SRR035090.74400
454 Sequencing (SRP001811)
136
61
-
Arg
TCT
[SRA]
>SRA1037317
SRR035090.112700
454 Sequencing (SRP001811)
130
55
-
Arg
TCT
[SRA]
>SRA1037358
SRR035090.122194
454 Sequencing (SRP001811)
96
171
+
Arg
TCT
[SRA]
>SRA1037371
SRR035090.124061
454 Sequencing (SRP001811)
391
466
+
Arg
TCT
[SRA]
>SRA1037389
SRR035090.127462
454 Sequencing (SRP001811)
233
158
-
Arg
TCT
[SRA]
>SRA1037595
SRR035090.160410
454 Sequencing (SRP001811)
279
204
-
Arg
TCT
[SRA]
>SRA1037719
SRR035090.180084
454 Sequencing (SRP001811)
221
296
+
Arg
TCT
[SRA]
>SRA1037827
SRR035090.202195
454 Sequencing (SRP001811)
115
190
+
Arg
TCT
[SRA]
>SRA1037908
SRR035090.216882
454 Sequencing (SRP001811)
136
61
-
Arg
TCT
[SRA]
>SRA1037974
SRR035090.228087
454 Sequencing (SRP001811)
134
209
+
Arg
TCT
[SRA]
>SRA1038018
SRR035090.234247
454 Sequencing (SRP001811)
382
457
+
Arg
TCT
[SRA]
>SRA1038031
SRR035090.235983
454 Sequencing (SRP001811)
395
320
-
Arg
TCT
[SRA]
>SRA1038130
SRR035090.249995
454 Sequencing (SRP001811)
110
185
+
Arg
TCT
[SRA]
>SRA1038352
SRR035090.290624
454 Sequencing (SRP001811)
319
394
+
Arg
TCT
[SRA]
>SRA1038355
SRR035090.290861
454 Sequencing (SRP001811)
331
406
+
Arg
TCT
[SRA]
>SRA1038500
SRR035090.316210
454 Sequencing (SRP001811)
257
182
-
Arg
TCT
[SRA]
>SRA1038613
SRR035090.337346
454 Sequencing (SRP001811)
62
137
+
Arg
TCT
[SRA]
>SRA1038662
SRR035090.345926
454 Sequencing (SRP001811)
231
306
+
Arg
TCT
[SRA]
>SRA1038812
SRR035090.371295
454 Sequencing (SRP001811)
107
32
-
Arg
TCT
[SRA]
>SRA1038852
SRR035090.379721
454 Sequencing (SRP001811)
331
406
+
Arg
TCT
[SRA]
>SRA1038914
SRR035090.393340
454 Sequencing (SRP001811)
189
114
-
Arg
TCT
[SRA]
>SRA1038928
SRR035090.396008
454 Sequencing (SRP001811)
138
63
-
Arg
TCT
[SRA]
>SRA1039122
SRR035090.428997
454 Sequencing (SRP001811)
347
272
-
Arg
TCT
[SRA]
>SRA1039129
SRR035090.429531
454 Sequencing (SRP001811)
59
134
+
Arg
TCT
[SRA]
>SRA1039143
SRR035090.431533
454 Sequencing (SRP001811)
333
408
+
Arg
TCT
[SRA]
>SRA1039174
SRR035090.437161
454 Sequencing (SRP001811)
223
298
+
Arg
TCT
[SRA]
>SRA1039647
SRR035090.535691
454 Sequencing (SRP001811)
256
331
+
Arg
TCT
[SRA]
>SRA1039690
SRR035090.546114
454 Sequencing (SRP001811)
426
351
-
Arg
TCT
[SRA]
>SRA1039753
SRR035090.560280
454 Sequencing (SRP001811)
233
308
+
Arg
TCT
[SRA]
>SRA1039768
SRR035090.564789
454 Sequencing (SRP001811)
331
406
+
Arg
TCT
[SRA]
>SRA1039773
SRR035090.566191
454 Sequencing (SRP001811)
335
260
-
Arg
TCT
[SRA]
>SRA1039779
SRR035090.566882
454 Sequencing (SRP001811)
279
204
-
Arg
TCT
[SRA]
>SRA1042480
SRR035091.395168
454 Sequencing (SRP001812)
184
109
-
Arg
TCT
[SRA]
>W2011502914
RXYJ01000001
Chlorobiota
Chlorobium phaeovibrioides GrKhr17 [RXYJ]
123326
123401
+
Arg
TCT
[ENA]
¡û
>W2011502989
RXYK01000013
Chlorobiota
Chlorobium phaeovibrioides BrKhr17 [RXYK]
11309
11384
+
Arg
TCT
[ENA]
¡û
>SRA1046007
SRR035093.215469
454 Sequencing (SRP001814)
28
103
+
Arg
TCT
[SRA]
>SRA1046021
SRR035093.217743
454 Sequencing (SRP001814)
55
130
+
Arg
TCT
[SRA]
>W2011609991
SJPA01000006
Chlorobiota
Chlorobium sp. N1 [SJPA]
57080
57005
-
Arg
TCT
[ENA]
¡û
>SRA1046941
SRR035093.422977
454 Sequencing (SRP001814)
215
140
-
Arg
TCT
[SRA]
>SRA1047196
SRR035093.479804
454 Sequencing (SRP001814)
335
410
+
Arg
TCT
[SRA]
>SRA1049830
SRR035095.144630
454 Sequencing (SRP001816)
105
30
-
Arg
TCT
[SRA]
>W2012093230
VMRG01000001
Chlorobiota
Chlorobium phaeovibrioides GrTcv12 [VMRG]
1362294
1362219
-
Arg
TCT
[ENA]
¡û
>SRA1053971
SRR035099.20027
454 Sequencing (SRP001820)
336
411
+
Arg
TCT
[SRA]
>SRA1054151
SRR035099.70291
454 Sequencing (SRP001820)
73
148
+
Arg
TCT
[SRA]
>SRA1054312
SRR035099.104370
454 Sequencing (SRP001820)
333
408
+
Arg
TCT
[SRA]
>SRA1054457
SRR035099.135712
454 Sequencing (SRP001820)
103
28
-
Arg
TCT
[SRA]
>SRA1054579
SRR035099.167713
454 Sequencing (SRP001820)
395
320
-
Arg
TCT
[SRA]
>SRA1054606
SRR035099.171252
454 Sequencing (SRP001820)
122
47
-
Arg
TCT
[SRA]
>SRA1054782
SRR035099.210938
454 Sequencing (SRP001820)
122
47
-
Arg
TCT
[SRA]
>SRA1054793
SRR035099.215356
454 Sequencing (SRP001820)
122
47
-
Arg
TCT
[SRA]
>W2012440408
WUBZ01000024
Chlorobiota
Chlorobium phaeovibrioides ZM [WUBZ]
21336
21411
+
Arg
TCT
[ENA]
¡û
>C201100852
CP041698
Chlorobiota
Chlorobium phaeovibrioides PhvTcv-s14 [CP041698]
771065
771140
+
Arg
TCT
-
¡û
>W1610977653
LVWG01000033
Chlorobiota
Pelodictyon luteolum [LVWG]
121291
121366
+
Arg
TCT
[ENA]
¡û
Identical group No.527001 (3 seq.)
>W1711626065
MPJE01000011
Chlorobiota
Chlorobium sp. KB01 [MPJE]
15651
15726
+
Arg
TCT
[ENA]
¡û
>w018065
AASE01000037
Chlorobiota
Chlorobium ferrooxidans DSM 13031 [AASE]
10168
10245
+
Arg
TCT
[ENA]
¡û
>W2010532731
JAAORA010000004
Chlorobiota
Chlorobium sp. BLA1 [JAAORA]
10224
10151
-
Arg
TCT
[ENA]
¡û
Identical group No.592863 (8 seq.)
>W1710858993
LMBR01000091
Chlorobiota
Chlorobium limicola [LMBR]
3716
3641
-
Arg
TCT
[ENA]
¡û
>C006584
CP000492
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [CP000492]
1053256
1053331
+
Arg
TCT
[Ensembl]
¡û
>C08003513
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
1769857
1769782
-
Arg
TCT
[Ensembl]
¡û
>WENV170625088
FUWD013191518
[FUWD] metagenome; unknown
10871
10946
+
Arg
TCT
[ENA]
¡û
>WENV170625542
FUWD013200087
[FUWD] metagenome; unknown
2221
2296
+
Arg
TCT
[ENA]
¡û
>WENV170633345
FUWD013394818
[FUWD] metagenome; unknown
10871
10946
+
Arg
TCT
[ENA]
¡û
>WENV170633769
FUWD013402406
[FUWD] metagenome; unknown
2221
2296
+
Arg
TCT
[ENA]
¡û
>W1610721339
LMBR01000091
Chlorobiota
Chlorobium limicola [LMBR]
3716
3641
-
Arg
TCT
[ENA]
¡û
Identical group No.620044 (6 seq.)
>W1711136070
LUZT01000006
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
643071
643144
+
Arg
TCT
[ENA]
¡û
>C171060582
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
1686836
1686763
-
Arg
TCT
-
¡û
>W2011543738
SDGU01000006
Chlorobiota
Chlorobaculum sp. 24CR [SDGU]
25270
25197
-
Arg
TCT
[ENA]
¡û
>W2011980159
VDCH01000008
Chlorobiota
Chlorobaculum thiosulfatiphilum DSM 249 [VDCH]
10000
10073
+
Arg
TCT
[ENA]
¡û
>C231486401
CP104202
Chlorobiota
Chlorobaculum sp. MV4-Y [CP104202]
1404031
1403958
-
Arg
TCT
-
¡û
>W1610947190
LUZT01000006
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
643071
643144
+
Arg
TCT
[ENA]
¡û
Identical group No.666496 (2 seq.)
>w007221
AAIK01000059
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [AAIK]
4209
4132
-
Arg
TCT
[ENA]
¡û
>C08007716
CP001110
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [CP001110]
2178404
2178329
-
Arg
TCT
[Ensembl]
¡û
Identical group No.666734 (1 seq.)
>W09102652
AAIB01000007
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [AAIB]
408
333
-
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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