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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Chlorobiota
Anticodon = TGT
HIT:
12 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.523739 (2 seq.)
>W1710856765
LLZP01000030
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
40305
40378
+
Thr
TGT
[ENA]
¡û
>W1610719146
LLZP01000030
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
40305
40378
+
Thr
TGT
[ENA]
¡û
Identical group No.524837 (140 seq.)
>W1710858997
LMBR01000100
Chlorobiota
Chlorobium limicola [LMBR]
4234
4161
-
Thr
TGT
[ENA]
¡û
>W1711167304
LVWG01000021
Chlorobiota
Pelodictyon luteolum [LVWG]
67505
67432
-
Thr
TGT
[ENA]
¡û
>W1711626075
MPJE01000019
Chlorobiota
Chlorobium sp. KB01 [MPJE]
35643
35570
-
Thr
TGT
[ENA]
¡û
>C171060550
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
82732
82805
+
Thr
TGT
-
¡û
>C005287
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
399282
399354
+
Thr
TGT
[Ensembl]
¡û
>C006573
CP000492
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [CP000492]
252936
253008
+
Thr
TGT
[Ensembl]
¡û
>C016751
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
2191405
2191333
-
Thr
TGT
[Ensembl]
¡û
>C018256
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1795650
1795578
-
Thr
TGT
[Ensembl]
¡û
>w018059
AASE01000035
Chlorobiota
Chlorobium ferrooxidans DSM 13031 [AASE]
11014
11089
+
Thr
TGT
[ENA]
¡û
>w007215
AAIK01000054
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [AAIK]
10780
10855
+
Thr
TGT
[ENA]
¡û
>w007146
AAIJ01000002
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
1635
1560
-
Thr
TGT
[ENA]
¡û
>w006092
AAHJ01000001
Chlorobiota
Chlorobium limicola DSM 245 [AAHJ]
104
29
-
Thr
TGT
[ENA]
¡û
>WENV180240642
OBDD01035744
[OBDD] human gut metagenome; human gut
205
130
-
Thr
TGT
[ENA]
¡û
>WENV180818680
ODJQ01054519
[ODJQ] human metagenome; G_DNA_Stool
644
569
-
Thr
TGT
[ENA]
¡û
>WENV181237145
OFFA01181379
[OFFA] coral metagenome; NA
239
312
+
Thr
TGT
[ENA]
¡û
>C08003488
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
210522
210595
+
Thr
TGT
[Ensembl]
¡û
>C08003629
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
311622
311695
+
Thr
TGT
[Ensembl]
¡û
>C08003796
CP001100
Chlorobiota
Chloroherpeton thalassium ATCC 35110 [CP001100]
1378501
1378574
+
Thr
TGT
[Ensembl]
¡û
>C08007709
CP001110
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [CP001110]
2774980
2774907
-
Thr
TGT
[Ensembl]
¡û
>C08007148
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
298146
298219
+
Thr
TGT
[Ensembl]
¡û
>WENV183263523
OLRR01000403
[OLRR] human gut metagenome; faeces
1021
1096
+
Thr
TGT
[ENA]
¡û
>WENV183812092
PYLN01000002
[PYLN] freshwater metagenome; meromictic lake
30655
30582
-
Thr
TGT
[ENA]
¡û
>WENV170137939
CENW01069436
[CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
969
894
-
Thr
TGT
[ENA]
¡û
>WENV170157136
CEOJ01037002
[CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
111
186
+
Thr
TGT
[ENA]
¡û
>WENV170598899
FUWD010054310
[FUWD] metagenome; unknown
366
293
-
Thr
TGT
[ENA]
¡û
>WENV170613590
FUWD012814623
[FUWD] metagenome; unknown
22129
22202
+
Thr
TGT
[ENA]
¡û
>WENV170613992
FUWD012823312
[FUWD] metagenome; unknown
14504
14577
+
Thr
TGT
[ENA]
¡û
>WENV170619760
FUWD013020623
[FUWD] metagenome; unknown
19085
19158
+
Thr
TGT
[ENA]
¡û
>WENV170624596
FUWD013183728
[FUWD] metagenome; unknown
8053
8126
+
Thr
TGT
[ENA]
¡û
>WENV170627881
FUWD013238913
[FUWD] metagenome; unknown
19085
19158
+
Thr
TGT
[ENA]
¡û
>WENV170632879
FUWD013388245
[FUWD] metagenome; unknown
8053
8126
+
Thr
TGT
[ENA]
¡û
>WENV170841831
MDSZ01229597
[MDSZ] marine metagenome; seawater
4032
4107
+
Thr
TGT
[ENA]
¡û
>WENV170940324
MDTG01341210
[MDTG] marine metagenome; seawater
684
609
-
Thr
TGT
[ENA]
¡û
>W09102642
AAIB01000004
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [AAIB]
40829
40756
-
Thr
TGT
[ENA]
¡û
>W09103347
AAJD01000003
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
204313
204386
+
Thr
TGT
[ENA]
¡û
>W1810062177
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
2640961
2640888
-
Thr
TGT
[ENA]
¡û
>W1810062240
PDNY01000026
Chlorobiota
Prosthecochloris sp. ZM_2 [PDNY]
16443
16369
-
Thr
TGT
[ENA]
¡û
>W1810062260
PDNZ01000003
Chlorobiota
Prosthecochloris marina V1 [PDNZ]
227383
227310
-
Thr
TGT
[ENA]
¡û
>SRA1017488
SRR035082.148445
454 Sequencing (SRP001803)
226
153
-
Thr
TGT
[SRA]
>SRA1018568
SRR035082.312095
454 Sequencing (SRP001803)
222
295
+
Thr
TGT
[SRA]
>SRA1019125
SRR035082.406202
454 Sequencing (SRP001803)
180
107
-
Thr
TGT
[SRA]
>SRA1019875
SRR035083.10803
454 Sequencing (SRP001804)
332
259
-
Thr
TGT
[SRA]
>SRA1019902
SRR035083.18618
454 Sequencing (SRP001804)
309
236
-
Thr
TGT
[SRA]
>SRA1020016
SRR035083.42089
454 Sequencing (SRP001804)
142
69
-
Thr
TGT
[SRA]
>SRA1020089
SRR035083.56609
454 Sequencing (SRP001804)
29
102
+
Thr
TGT
[SRA]
>SRA1020105
SRR035083.58039
454 Sequencing (SRP001804)
101
28
-
Thr
TGT
[SRA]
>SRA1020106
SRR035083.58046
454 Sequencing (SRP001804)
254
181
-
Thr
TGT
[SRA]
>SRA1020307
SRR035083.94993
454 Sequencing (SRP001804)
101
28
-
Thr
TGT
[SRA]
>SRA1020357
SRR035083.101598
454 Sequencing (SRP001804)
334
261
-
Thr
TGT
[SRA]
>SRA1020408
SRR035083.110863
454 Sequencing (SRP001804)
332
259
-
Thr
TGT
[SRA]
>SRA1020490
SRR035083.122621
454 Sequencing (SRP001804)
273
346
+
Thr
TGT
[SRA]
>SRA1020549
SRR035083.133731
454 Sequencing (SRP001804)
116
43
-
Thr
TGT
[SRA]
>SRA1020734
SRR035083.157200
454 Sequencing (SRP001804)
260
333
+
Thr
TGT
[SRA]
>SRA1020746
SRR035083.159174
454 Sequencing (SRP001804)
423
496
+
Thr
TGT
[SRA]
>SRA1020767
SRR035083.162002
454 Sequencing (SRP001804)
252
179
-
Thr
TGT
[SRA]
>SRA1020915
SRR035083.184374
454 Sequencing (SRP001804)
375
448
+
Thr
TGT
[SRA]
>SRA1021009
SRR035083.197277
454 Sequencing (SRP001804)
116
43
-
Thr
TGT
[SRA]
>SRA1021040
SRR035083.202516
454 Sequencing (SRP001804)
273
200
-
Thr
TGT
[SRA]
>SRA1021529
SRR035083.269832
454 Sequencing (SRP001804)
159
232
+
Thr
TGT
[SRA]
>SRA1021746
SRR035083.301291
454 Sequencing (SRP001804)
406
479
+
Thr
TGT
[SRA]
>SRA1021770
SRR035083.306752
454 Sequencing (SRP001804)
428
501
+
Thr
TGT
[SRA]
>SRA1022123
SRR035083.356142
454 Sequencing (SRP001804)
189
116
-
Thr
TGT
[SRA]
>SRA1022137
SRR035083.357737
454 Sequencing (SRP001804)
133
60
-
Thr
TGT
[SRA]
>SRA1022314
SRR035083.387277
454 Sequencing (SRP001804)
206
133
-
Thr
TGT
[SRA]
>SRA1022412
SRR035083.402697
454 Sequencing (SRP001804)
133
60
-
Thr
TGT
[SRA]
>SRA1022444
SRR035083.406043
454 Sequencing (SRP001804)
139
212
+
Thr
TGT
[SRA]
>SRA1022989
SRR035083.500820
454 Sequencing (SRP001804)
159
232
+
Thr
TGT
[SRA]
>SRA1023035
SRR035083.509888
454 Sequencing (SRP001804)
261
333
+
Thr
TGT
[SRA]
>SRA1026319
SRR035085.185260
454 Sequencing (SRP001806)
430
357
-
Thr
TGT
[SRA]
>SRA1028805
SRR035087.12237
454 Sequencing (SRP001808)
57
130
+
Thr
TGT
[SRA]
>SRA1029073
SRR035087.69287
454 Sequencing (SRP001808)
46
119
+
Thr
TGT
[SRA]
>SRA1029928
SRR035087.203410
454 Sequencing (SRP001808)
398
471
+
Thr
TGT
[SRA]
>SRA1032719
SRR035088.86779
454 Sequencing (SRP001809)
292
219
-
Thr
TGT
[SRA]
>SRA1032992
SRR035088.146051
454 Sequencing (SRP001809)
173
246
+
Thr
TGT
[SRA]
>SRA1033008
SRR035088.151199
454 Sequencing (SRP001809)
347
274
-
Thr
TGT
[SRA]
>SRA1033183
SRR035088.191960
454 Sequencing (SRP001809)
152
79
-
Thr
TGT
[SRA]
>SRA1033432
SRR035088.256733
454 Sequencing (SRP001809)
57
130
+
Thr
TGT
[SRA]
>SRA1033864
SRR035088.384471
454 Sequencing (SRP001809)
245
172
-
Thr
TGT
[SRA]
>SRA1033914
SRR035088.405831
454 Sequencing (SRP001809)
86
13
-
Thr
TGT
[SRA]
>SRA1034186
SRR035089.17134
454 Sequencing (SRP001810)
124
51
-
Thr
TGT
[SRA]
>SRA1035265
SRR035089.270799
454 Sequencing (SRP001810)
176
103
-
Thr
TGT
[SRA]
>W2010532709
JAAORA010000002
Chlorobiota
Chlorobium sp. BLA1 [JAAORA]
152371
152444
+
Thr
TGT
[ENA]
¡û
>SRA1036338
SRR035089.498190
454 Sequencing (SRP001810)
104
177
+
Thr
TGT
[SRA]
>SRA1036928
SRR035090.40403
454 Sequencing (SRP001811)
186
259
+
Thr
TGT
[SRA]
>SRA1036950
SRR035090.44248
454 Sequencing (SRP001811)
184
111
-
Thr
TGT
[SRA]
>SRA1036973
SRR035090.49611
454 Sequencing (SRP001811)
183
110
-
Thr
TGT
[SRA]
>SRA1037010
SRR035090.58581
454 Sequencing (SRP001811)
145
218
+
Thr
TGT
[SRA]
>W2010640180
JABVZQ010000005
Chlorobiota
Prosthecochloris sp. DSM 1685 [JABVZQ]
34515
34441
-
Thr
TGT
[ENA]
¡û
>SRA1037118
SRR035090.76609
454 Sequencing (SRP001811)
160
87
-
Thr
TGT
[SRA]
>SRA1037323
SRR035090.114261
454 Sequencing (SRP001811)
375
448
+
Thr
TGT
[SRA]
>SRA1037554
SRR035090.153420
454 Sequencing (SRP001811)
120
193
+
Thr
TGT
[SRA]
>SRA1037766
SRR035090.191656
454 Sequencing (SRP001811)
289
362
+
Thr
TGT
[SRA]
>SRA1037961
SRR035090.226922
454 Sequencing (SRP001811)
258
185
-
Thr
TGT
[SRA]
>SRA1038033
SRR035090.236153
454 Sequencing (SRP001811)
340
267
-
Thr
TGT
[SRA]
>SRA1038067
SRR035090.241564
454 Sequencing (SRP001811)
93
20
-
Thr
TGT
[SRA]
>SRA1038087
SRR035090.243541
454 Sequencing (SRP001811)
147
220
+
Thr
TGT
[SRA]
>SRA1038737
SRR035090.357126
454 Sequencing (SRP001811)
150
223
+
Thr
TGT
[SRA]
>SRA1038785
SRR035090.365039
454 Sequencing (SRP001811)
457
530
+
Thr
TGT
[SRA]
>SRA1038849
SRR035090.379507
454 Sequencing (SRP001811)
237
164
-
Thr
TGT
[SRA]
>SRA1038967
SRR035090.401944
454 Sequencing (SRP001811)
232
159
-
Thr
TGT
[SRA]
>SRA1039131
SRR035090.429851
454 Sequencing (SRP001811)
228
301
+
Thr
TGT
[SRA]
>SRA1039226
SRR035090.446979
454 Sequencing (SRP001811)
218
145
-
Thr
TGT
[SRA]
>SRA1039433
SRR035090.491431
454 Sequencing (SRP001811)
341
414
+
Thr
TGT
[SRA]
>SRA1039499
SRR035090.504205
454 Sequencing (SRP001811)
292
365
+
Thr
TGT
[SRA]
>SRA1039532
SRR035090.509368
454 Sequencing (SRP001811)
295
222
-
Thr
TGT
[SRA]
>SRA1039610
SRR035090.529015
454 Sequencing (SRP001811)
144
71
-
Thr
TGT
[SRA]
>SRA1039721
SRR035090.553799
454 Sequencing (SRP001811)
292
365
+
Thr
TGT
[SRA]
>W2011502936
RXYJ01000002
Chlorobiota
Chlorobium phaeovibrioides GrKhr17 [RXYJ]
65914
65841
-
Thr
TGT
[ENA]
¡û
>W2011502966
RXYK01000002
Chlorobiota
Chlorobium phaeovibrioides BrKhr17 [RXYK]
133425
133498
+
Thr
TGT
[ENA]
¡û
>SRA1046051
SRR035093.224300
454 Sequencing (SRP001814)
420
493
+
Thr
TGT
[SRA]
>W2011543771
SDGU01000068
Chlorobiota
Chlorobaculum sp. 24CR [SDGU]
7139
7212
+
Thr
TGT
[ENA]
¡û
>SRA1046200
SRR035093.253138
454 Sequencing (SRP001814)
51
124
+
Thr
TGT
[SRA]
>SRA1046636
SRR035093.349835
454 Sequencing (SRP001814)
220
147
-
Thr
TGT
[SRA]
>W2011980172
VDCH01000017
Chlorobiota
Chlorobaculum thiosulfatiphilum DSM 249 [VDCH]
7837
7910
+
Thr
TGT
[ENA]
¡û
>W2012093225
VMRG01000001
Chlorobiota
Chlorobium phaeovibrioides GrTcv12 [VMRG]
1883695
1883622
-
Thr
TGT
[ENA]
¡û
>SRA1053337
SRR035098.386680
454 Sequencing (SRP001819)
228
155
-
Thr
TGT
[SRA]
>SRA1054027
SRR035099.37026
454 Sequencing (SRP001820)
33
106
+
Thr
TGT
[SRA]
>SRA1054032
SRR035099.38386
454 Sequencing (SRP001820)
509
436
-
Thr
TGT
[SRA]
>SRA1054045
SRR035099.42846
454 Sequencing (SRP001820)
81
6
-
Thr
TGT
[SRA]
>SRA1054078
SRR035099.52193
454 Sequencing (SRP001820)
260
187
-
Thr
TGT
[SRA]
>SRA1054255
SRR035099.93112
454 Sequencing (SRP001820)
241
168
-
Thr
TGT
[SRA]
>SRA1054357
SRR035099.115116
454 Sequencing (SRP001820)
71
144
+
Thr
TGT
[SRA]
>SRA1054374
SRR035099.118584
454 Sequencing (SRP001820)
356
283
-
Thr
TGT
[SRA]
>SRA1054562
SRR035099.164290
454 Sequencing (SRP001820)
130
203
+
Thr
TGT
[SRA]
>SRA1054608
SRR035099.172210
454 Sequencing (SRP001820)
316
243
-
Thr
TGT
[SRA]
>SRA1054648
SRR035099.181707
454 Sequencing (SRP001820)
101
174
+
Thr
TGT
[SRA]
>SRA1054657
SRR035099.182850
454 Sequencing (SRP001820)
508
435
-
Thr
TGT
[SRA]
>SRA1054683
SRR035099.188520
454 Sequencing (SRP001820)
71
144
+
Thr
TGT
[SRA]
>SRA1054698
SRR035099.190338
454 Sequencing (SRP001820)
322
249
-
Thr
TGT
[SRA]
>SRA1054758
SRR035099.207667
454 Sequencing (SRP001820)
201
274
+
Thr
TGT
[SRA]
>SRA1054843
SRR035099.228704
454 Sequencing (SRP001820)
381
308
-
Thr
TGT
[SRA]
>SRA1054859
SRR035099.236180
454 Sequencing (SRP001820)
135
62
-
Thr
TGT
[SRA]
>W2012440386
WUBZ01000004
Chlorobiota
Chlorobium phaeovibrioides ZM [WUBZ]
59409
59482
+
Thr
TGT
[ENA]
¡û
>W2110315946
JADGIH010000005
Chlorobiota
Prosthecochloris ethylica N2 [JADGIH]
140520
140594
+
Thr
TGT
[ENA]
¡û
>W2110315989
JADGII010000005
Chlorobiota
Prosthecochloris ethylica N3 [JADGII]
16386
16312
-
Thr
TGT
[ENA]
¡û
>C201100844
CP041698
Chlorobiota
Chlorobium phaeovibrioides PhvTcv-s14 [CP041698]
239899
239972
+
Thr
TGT
-
¡û
>C231534724
CP110622
Chlorobiota
Prosthecochloris sp. SCSIO W1103 [CP110622]
2546279
2546206
-
Thr
TGT
-
¡û
>C231534770
CP110623
Chlorobiota
Prosthecochloris sp. SCSIO W1101 [CP110623]
2755128
2755055
-
Thr
TGT
-
¡û
>W1610721343
LMBR01000100
Chlorobiota
Chlorobium limicola [LMBR]
4234
4161
-
Thr
TGT
[ENA]
¡û
>W1610977635
LVWG01000021
Chlorobiota
Pelodictyon luteolum [LVWG]
67505
67432
-
Thr
TGT
[ENA]
¡û
Identical group No.531490 (76 seq.)
>W1711283071
LZOF01000041
Spirochaetota
Brachyspira hampsonii [LZOF]
3059
2986
-
Thr
TGT
[ENA]
¡û
>W1711283093
LZOG01000068
Spirochaetota
Brachyspira hampsonii [LZOG]
4535
4608
+
Thr
TGT
[ENA]
¡û
>W1711307482
MAOX01000009
Spirochaetota
Brachyspira hyodysenteriae [MAOX]
66428
66501
+
Thr
TGT
[ENA]
¡û
>W1711307521
MAOY01000011
Spirochaetota
Brachyspira hyodysenteriae [MAOY]
66775
66848
+
Thr
TGT
[ENA]
¡û
>W1711351568
MDCO01000012
Spirochaetota
Brachyspira hampsonii [MDCO]
811839
811766
-
Thr
TGT
[ENA]
¡û
>W1711507040
MKXF01000005
Spirochaetota
Brachyspira hyodysenteriae [MKXF]
67922
67995
+
Thr
TGT
[ENA]
¡û
>C171049441
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
263377
263450
+
Thr
TGT
-
¡û
>W131093639
AOMM01000097
Spirochaetota
Brachyspira hampsonii 30599 [AOMM]
2983
2910
-
Thr
TGT
[ENA]
¡û
>W131184493
ARSY01000035
Spirochaetota
Brachyspira hyodysenteriae ATCC 27164 [ARSY]
22352
22279
-
Thr
TGT
[ENA]
¡û
>W141037629
ALNZ01000011
Spirochaetota
Brachyspira hampsonii 30446 [ALNZ]
102068
101995
-
Thr
TGT
[ENA]
¡û
>C181038060
CP019600
Spirochaetota
Brachyspira hyodysenteriae BH718 [CP019600]
1407256
1407329
+
Thr
TGT
-
¡û
>C191016992
CP019914
Spirochaetota
Brachyspira hampsonii NSH-16 [CP019914]
2146264
2146191
-
Thr
TGT
-
¡û
>W1910569205
JJMV01000006
Spirochaetota
Brachyspira hampsonii bv. II KL-180 [JJMV]
2809437
2809510
+
Thr
TGT
[ENA]
¡û
>C09102331
CP001357
Spirochaetota
Brachyspira hyodysenteriae WA1 WA1; ATCC 49526 [CP001357]
1654426
1654499
+
Thr
TGT
[Ensembl]
¡û
>W2010754938
JJMV01000006
Spirochaetota
Brachyspira hampsonii bv. II KL-180 [JJMV]
2809437
2809510
+
Thr
TGT
[ENA]
¡û
>W2010800778
LZOH01000012
Spirochaetota
Brachyspira hyodysenteriae NM7 [LZOH]
43324
43397
+
Thr
TGT
[ENA]
¡û
>W2010800804
LZOI01000013
Spirochaetota
Brachyspira hyodysenteriae NM33 [LZOI]
21994
21921
-
Thr
TGT
[ENA]
¡û
>W2010800830
LZOJ01000004
Spirochaetota
Brachyspira hyodysenteriae NM62 [LZOJ]
46553
46626
+
Thr
TGT
[ENA]
¡û
>W2010800884
LZOK01000035
Spirochaetota
Brachyspira hyodysenteriae NM41 [LZOK]
43143
43216
+
Thr
TGT
[ENA]
¡û
>W2010800900
LZOL01000007
Spirochaetota
Brachyspira hyodysenteriae NM15 [LZOL]
44832
44905
+
Thr
TGT
[ENA]
¡û
>W2010800927
LZOM01000002
Spirochaetota
Brachyspira hyodysenteriae NM21 [LZOM]
44804
44877
+
Thr
TGT
[ENA]
¡û
>W2010800956
LZON01000005
Spirochaetota
Brachyspira hyodysenteriae NM31 [LZON]
33904
33831
-
Thr
TGT
[ENA]
¡û
>W2010801015
LZOO01000047
Spirochaetota
Brachyspira hyodysenteriae NM65 [LZOO]
7596
7523
-
Thr
TGT
[ENA]
¡û
>W2010801047
LZOP01000048
Spirochaetota
Brachyspira hyodysenteriae B204_labpassaged [LZOP]
42983
43056
+
Thr
TGT
[ENA]
¡û
>W2010801054
LZOQ01000006
Spirochaetota
Brachyspira hyodysenteriae B204_pigpassaged [LZOQ]
48627
48700
+
Thr
TGT
[ENA]
¡û
>W2010801109
LZOR01000060
Spirochaetota
Brachyspira hyodysenteriae NM44 [LZOR]
44849
44922
+
Thr
TGT
[ENA]
¡û
>W2010801135
LZOS01000027
Spirochaetota
Brachyspira hyodysenteriae NM18 [LZOS]
9770
9843
+
Thr
TGT
[ENA]
¡û
>W2010801157
LZOT01000020
Spirochaetota
Brachyspira hyodysenteriae NM28 [LZOT]
34228
34155
-
Thr
TGT
[ENA]
¡û
>W2010801200
LZOU01000040
Spirochaetota
Brachyspira hyodysenteriae NM5 [LZOU]
44991
45064
+
Thr
TGT
[ENA]
¡û
>W2011604202
SJDU01000038
Spirochaetota
Brachyspira sp. Z12 [SJDU]
10643
10716
+
Thr
TGT
[ENA]
¡û
>W2011980215
VDCI01000006
Chlorobiota
Prosthecochloris vibrioformis DSM 260 [VDCI]
58363
58436
+
Thr
TGT
[ENA]
¡û
>W2110476111
JAFCSI010000012
Spirochaetota
Brachyspira hyodysenteriae BHZ819 [JAFCSI]
23711
23638
-
Thr
TGT
[ENA]
¡û
>W2110476143
JAFCSJ010000012
Spirochaetota
Brachyspira hyodysenteriae BHZ784 [JAFCSJ]
36227
36154
-
Thr
TGT
[ENA]
¡û
>W2110476176
JAFCSK010000012
Spirochaetota
Brachyspira hyodysenteriae BHZ777 [JAFCSK]
43329
43402
+
Thr
TGT
[ENA]
¡û
>W2110476208
JAFCSL010000012
Spirochaetota
Brachyspira hyodysenteriae BHZ695 [JAFCSL]
43329
43402
+
Thr
TGT
[ENA]
¡û
>W2110476239
JAFCSM010000012
Spirochaetota
Brachyspira hyodysenteriae BHZ684 [JAFCSM]
36239
36166
-
Thr
TGT
[ENA]
¡û
>W2110476272
JAFCSN010000013
Spirochaetota
Brachyspira hyodysenteriae BHZ660 [JAFCSN]
23432
23359
-
Thr
TGT
[ENA]
¡û
>W2110476304
JAFCSO010000015
Spirochaetota
Brachyspira hyodysenteriae BHZ630 [JAFCSO]
23711
23638
-
Thr
TGT
[ENA]
¡û
>W2110476336
JAFCSP010000011
Spirochaetota
Brachyspira hyodysenteriae BHZ480 [JAFCSP]
36239
36166
-
Thr
TGT
[ENA]
¡û
>W2110476368
JAFCSQ010000012
Spirochaetota
Brachyspira hyodysenteriae BHZ333 [JAFCSQ]
42879
42952
+
Thr
TGT
[ENA]
¡û
>W2110476399
JAFCSR010000014
Spirochaetota
Brachyspira hyodysenteriae BHZ231 [JAFCSR]
36239
36166
-
Thr
TGT
[ENA]
¡û
>W2110476431
JAFCSS010000010
Spirochaetota
Brachyspira hyodysenteriae BHZ153 [JAFCSS]
36239
36166
-
Thr
TGT
[ENA]
¡û
>W2110476464
JAFCST010000012
Spirochaetota
Brachyspira hyodysenteriae BHZ26 [JAFCST]
43125
43198
+
Thr
TGT
[ENA]
¡û
>W2110476495
JAFCSU010000010
Spirochaetota
Brachyspira hyodysenteriae B 115_02A [JAFCSU]
43317
43390
+
Thr
TGT
[ENA]
¡û
>W2110476527
JAFCSV010000011
Spirochaetota
Brachyspira hyodysenteriae B 114_09C [JAFCSV]
36239
36166
-
Thr
TGT
[ENA]
¡û
>C211068554
CP046926
Spirochaetota
Brachyspira hyodysenteriae BHZ755 [CP046926]
1412156
1412229
+
Thr
TGT
-
¡û
>C211068586
CP046928
Spirochaetota
Brachyspira hyodysenteriae BHZ526 [CP046928]
1410177
1410250
+
Thr
TGT
-
¡û
>C211068620
CP046930
Spirochaetota
Brachyspira hyodysenteriae BHZ375 [CP046930]
1416265
1416338
+
Thr
TGT
-
¡û
>C211068650
CP046932
Spirochaetota
Brachyspira hyodysenteriae Bh743-7 [CP046932]
1410839
1410912
+
Thr
TGT
-
¡û
>W2110769533
SRZO01000136
Spirochaetota
Brachyspira hampsonii T104 [SRZO]
15635
15562
-
Thr
TGT
[ENA]
¡û
>W2110769542
SRZP01000143
Spirochaetota
Brachyspira hampsonii T100 [SRZP]
4528
4601
+
Thr
TGT
[ENA]
¡û
>W2110769590
SRZR01000219
Spirochaetota
Brachyspira hampsonii T009 [SRZR]
3105
3032
-
Thr
TGT
[ENA]
¡û
>C241198295
CP104712
Spirochaetota
Brachyspira hyodysenteriae ZH1261 [CP104712]
2421744
2421671
-
Thr
TGT
-
¡û
>W2130044234
SRZQ01000533
Spirochaetota
Brachyspira hampsonii T071 [SRZQ]
3077
3150
+
Thr
TGT
[ENA]
¡û
>C11103133
CP002874
Spirochaetota
Brachyspira intermedia PWS/A [CP002874]
450590
450517
-
Thr
TGT
[Ensembl]
¡û
>W1510641513
CVLB01000002
Spirochaetota
Brachyspira suanatina AN4859/03 [CVLB]
290986
291059
+
Thr
TGT
[ENA]
¡û
>W1511506936
JXNA01000015
Spirochaetota
Brachyspira hyodysenteriae 865 [JXNA]
30017
30090
+
Thr
TGT
[ENA]
¡û
>W1511506960
JXNB01000013
Spirochaetota
Brachyspira hyodysenteriae FMV89.3323 [JXNB]
29846
29919
+
Thr
TGT
[ENA]
¡û
>W1511507007
JXNC01000023
Spirochaetota
Brachyspira hyodysenteriae NX [JXNC]
29554
29627
+
Thr
TGT
[ENA]
¡û
>W1511507026
JXND01000010
Spirochaetota
Brachyspira hyodysenteriae B204 [JXND]
22247
22174
-
Thr
TGT
[ENA]
¡û
>W1511507056
JXNE01000006
Spirochaetota
Brachyspira hyodysenteriae B6933 [JXNE]
29823
29896
+
Thr
TGT
[ENA]
¡û
>W1511507103
JXNF01000041
Spirochaetota
Brachyspira hyodysenteriae B78 [JXNF]
29865
29938
+
Thr
TGT
[ENA]
¡û
>W1511507142
JXNG01000044
Spirochaetota
Brachyspira hyodysenteriae B8044 [JXNG]
29868
29941
+
Thr
TGT
[ENA]
¡û
>W1511507162
JXNH01000032
Spirochaetota
Brachyspira hyodysenteriae G21 [JXNH]
78771
78698
-
Thr
TGT
[ENA]
¡û
>W1511507205
JXNI01000071
Spirochaetota
Brachyspira hyodysenteriae G44 [JXNI]
30012
30085
+
Thr
TGT
[ENA]
¡û
>W1511507224
JXNJ01000012
Spirochaetota
Brachyspira hyodysenteriae FM88.90 [JXNJ]
23229
23156
-
Thr
TGT
[ENA]
¡û
>W1511507264
JXNK01000051
Spirochaetota
Brachyspira hyodysenteriae NSW15 [JXNK]
29952
30025
+
Thr
TGT
[ENA]
¡û
>W1511507293
JXNL01000054
Spirochaetota
Brachyspira hyodysenteriae NSW5 [JXNL]
21978
21905
-
Thr
TGT
[ENA]
¡û
>W1511507310
JXNM01000001
Spirochaetota
Brachyspira hyodysenteriae Q17 [JXNM]
21977
21904
-
Thr
TGT
[ENA]
¡û
>W1511507342
JXNN01000001
Spirochaetota
Brachyspira hyodysenteriae ST190 [JXNN]
29854
29927
+
Thr
TGT
[ENA]
¡û
>W1511507381
JXNO01000017
Spirochaetota
Brachyspira hyodysenteriae ST195 [JXNO]
29859
29932
+
Thr
TGT
[ENA]
¡û
>W1511507407
JXNP01000009
Spirochaetota
Brachyspira hyodysenteriae ST210 [JXNP]
21955
21882
-
Thr
TGT
[ENA]
¡û
>W1511507458
JXNQ01000031
Spirochaetota
Brachyspira hyodysenteriae ST265 [JXNQ]
29513
29586
+
Thr
TGT
[ENA]
¡û
>W1511507479
JXNR01000023
Spirochaetota
Brachyspira hyodysenteriae Vic2 [JXNR]
22585
22512
-
Thr
TGT
[ENA]
¡û
>W1511507506
JXNS01000021
Spirochaetota
Brachyspira hyodysenteriae WA100 [JXNS]
22238
22165
-
Thr
TGT
[ENA]
¡û
>C161092135
CP015910
Spirochaetota
Brachyspira hyodysenteriae ATCC 27164 B-78 [CP015910]
2065840
2065767
-
Thr
TGT
[Ensembl]
¡û
Identical group No.595772 (1 seq.)
>W141803625
JPGV01000010
Chlorobiota
[Candidatus Thermochlorobacteriaceae] bacterium GBChlB GBChlB [JPGV]
23678
23605
-
Thr
TGT
[ENA]
¡û
Identical group No.608917 (2 seq.)
>W1610552313
JYPE01000014
Chlorobiota
Chlorobi bacterium OLB4 [JYPE]
90918
90993
+
Thr
TGT
[ENA]
¡û
>W1710662978
JYPE01000014
Chlorobiota
Chlorobi bacterium OLB4 [JYPE]
90918
90993
+
Thr
TGT
[ENA]
¡û
Identical group No.620106 (4 seq.)
>C171113989
CP020873
Chlorobiota
Prosthecochloris sp. HL-130-GSB [CP020873]
266148
266221
+
Thr
TGT
-
¡û
>C08003606
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
2083561
2083488
-
Thr
TGT
[Ensembl]
¡û
>WENV183513542
OMKS01005830
[OMKS] sediment metagenome; hot spring sediment
2515
2442
-
Thr
TGT
[ENA]
¡û
>C181068765
CP022571
Chlorobiota
Prosthecochloris sp. GSB1 TY Vent [CP022571]
290563
290636
+
Thr
TGT
-
¡û
Identical group No.620692 (4 seq.)
>W1711136056
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
506644
506569
-
Thr
TGT
[ENA]
¡û
>C007004
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
152008
152083
+
Thr
TGT
[Ensembl]
¡û
>C231486368
CP104202
Chlorobiota
Chlorobaculum sp. MV4-Y [CP104202]
78923
78996
+
Thr
TGT
-
¡û
>W1610947176
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
506644
506569
-
Thr
TGT
[ENA]
¡û
Identical group No.661515 (2 seq.)
>W1710856718
LLZO01000096
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
10992
11067
+
Thr
TGT
[ENA]
¡û
>W1610719099
LLZO01000096
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
10992
11067
+
Thr
TGT
[ENA]
¡û
Identical group No.664447 (2 seq.)
>W1710887514
LMYZ01000255
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
48827
48754
-
Thr
TGT
[ENA]
¡û
>W1610748214
LMYZ01000255
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
48827
48754
-
Thr
TGT
[ENA]
¡û
Identical group No.666932 (2 seq.)
>W1610594305
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
791972
791899
-
Thr
TGT
[ENA]
¡û
>W1710713757
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
791972
791899
-
Thr
TGT
[ENA]
¡û
Identical group No.668273 (1 seq.)
>C211198499
CP065014
Chlorobiota
Chlorobi bacterium [CP065014]
894695
894770
+
Thr
TGT
-
¡û
Identical group No.681352 (1 seq.)
>W2011609977
SJPA01000002
Chlorobiota
Chlorobium sp. N1 [SJPA]
105420
105347
-
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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