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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Chlorobiota
Anticodon = TTT
HIT:
15 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.320788 (2 seq.)
>W1710856769
LLZP01000033
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
11135
11061
-
Lys
TTT
[ENA]
¡û
>W1610719150
LLZP01000033
Chlorobiota
Chlorobi bacterium OLB6 [LLZP]
11135
11061
-
Lys
TTT
[ENA]
¡û
Identical group No.343102 (4 seq.)
>W1711167325
LVWG01000033
Chlorobiota
Pelodictyon luteolum [LVWG]
34913
34836
-
Lys
TTT
[ENA]
¡û
>C016766
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
690115
690039
-
Lys
TTT
[Ensembl]
¡û
>WENV170613739
FUWD012818026
[FUWD] metagenome; unknown
6243
6166
-
Lys
TTT
[ENA]
¡û
>W1610977656
LVWG01000033
Chlorobiota
Pelodictyon luteolum [LVWG]
34913
34836
-
Lys
TTT
[ENA]
¡û
Identical group No.524841 (162 seq.)
>W1711167334
LVWG01000035
Chlorobiota
Pelodictyon luteolum [LVWG]
94228
94153
-
Lys
TTT
[ENA]
¡û
>C016756
CP000096
Chlorobiota
Pelodictyon luteolum DSM 273 [CP000096]
1965316
1965241
-
Lys
TTT
[Ensembl]
¡û
>C018261
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1709746
1709674
-
Lys
TTT
[Ensembl]
¡û
>WENV183812124
PYLN01000153
[PYLN] freshwater metagenome; meromictic lake
4145
4218
+
Lys
TTT
[ENA]
¡û
>WENV170613535
FUWD012813029
[FUWD] metagenome; unknown
28360
28435
+
Lys
TTT
[ENA]
¡û
>WENV170613772
FUWD012819316
[FUWD] metagenome; unknown
938
1011
+
Lys
TTT
[ENA]
¡û
>W09103375
AAJD01000022
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
940
867
-
Lys
TTT
[ENA]
¡û
>SRA1019882
SRR035083.13066
454 Sequencing (SRP001804)
229
302
+
Lys
TTT
[SRA]
>SRA1019922
SRR035083.23315
454 Sequencing (SRP001804)
228
301
+
Lys
TTT
[SRA]
>SRA1019967
SRR035083.31643
454 Sequencing (SRP001804)
384
311
-
Lys
TTT
[SRA]
>SRA1019971
SRR035083.32773
454 Sequencing (SRP001804)
252
179
-
Lys
TTT
[SRA]
>SRA1020037
SRR035083.45500
454 Sequencing (SRP001804)
186
259
+
Lys
TTT
[SRA]
>SRA1020039
SRR035083.46039
454 Sequencing (SRP001804)
86
159
+
Lys
TTT
[SRA]
>SRA1020070
SRR035083.53106
454 Sequencing (SRP001804)
336
409
+
Lys
TTT
[SRA]
>SRA1020092
SRR035083.57011
454 Sequencing (SRP001804)
189
262
+
Lys
TTT
[SRA]
>SRA1020098
SRR035083.57314
454 Sequencing (SRP001804)
88
161
+
Lys
TTT
[SRA]
>SRA1020152
SRR035083.64028
454 Sequencing (SRP001804)
189
262
+
Lys
TTT
[SRA]
>SRA1020156
SRR035083.64520
454 Sequencing (SRP001804)
216
143
-
Lys
TTT
[SRA]
>SRA1020283
SRR035083.89765
454 Sequencing (SRP001804)
166
239
+
Lys
TTT
[SRA]
>SRA1020295
SRR035083.92494
454 Sequencing (SRP001804)
256
329
+
Lys
TTT
[SRA]
>SRA1020323
SRR035083.96913
454 Sequencing (SRP001804)
383
310
-
Lys
TTT
[SRA]
>SRA1020335
SRR035083.98452
454 Sequencing (SRP001804)
4
77
+
Lys
TTT
[SRA]
>SRA1020391
SRR035083.106701
454 Sequencing (SRP001804)
437
510
+
Lys
TTT
[SRA]
>SRA1020475
SRR035083.120602
454 Sequencing (SRP001804)
132
59
-
Lys
TTT
[SRA]
>SRA1020542
SRR035083.131813
454 Sequencing (SRP001804)
104
177
+
Lys
TTT
[SRA]
>SRA1020601
SRR035083.139369
454 Sequencing (SRP001804)
273
346
+
Lys
TTT
[SRA]
>SRA1020626
SRR035083.142518
454 Sequencing (SRP001804)
438
511
+
Lys
TTT
[SRA]
>SRA1020672
SRR035083.150614
454 Sequencing (SRP001804)
375
302
-
Lys
TTT
[SRA]
>SRA1020709
SRR035083.154458
454 Sequencing (SRP001804)
193
266
+
Lys
TTT
[SRA]
>SRA1020764
SRR035083.161685
454 Sequencing (SRP001804)
132
59
-
Lys
TTT
[SRA]
>SRA1020925
SRR035083.186494
454 Sequencing (SRP001804)
327
254
-
Lys
TTT
[SRA]
>SRA1021031
SRR035083.200534
454 Sequencing (SRP001804)
165
238
+
Lys
TTT
[SRA]
>SRA1021049
SRR035083.203366
454 Sequencing (SRP001804)
253
180
-
Lys
TTT
[SRA]
>SRA1021190
SRR035083.221328
454 Sequencing (SRP001804)
174
101
-
Lys
TTT
[SRA]
>SRA1021206
SRR035083.223431
454 Sequencing (SRP001804)
476
403
-
Lys
TTT
[SRA]
>SRA1021220
SRR035083.225854
454 Sequencing (SRP001804)
440
367
-
Lys
TTT
[SRA]
>SRA1021270
SRR035083.234003
454 Sequencing (SRP001804)
174
101
-
Lys
TTT
[SRA]
>SRA1021333
SRR035083.244425
454 Sequencing (SRP001804)
75
148
+
Lys
TTT
[SRA]
>SRA1021351
SRR035083.247187
454 Sequencing (SRP001804)
327
254
-
Lys
TTT
[SRA]
>SRA1021381
SRR035083.253009
454 Sequencing (SRP001804)
392
319
-
Lys
TTT
[SRA]
>SRA1021474
SRR035083.263324
454 Sequencing (SRP001804)
392
319
-
Lys
TTT
[SRA]
>SRA1021489
SRR035083.265174
454 Sequencing (SRP001804)
392
319
-
Lys
TTT
[SRA]
>SRA1021551
SRR035083.272311
454 Sequencing (SRP001804)
423
350
-
Lys
TTT
[SRA]
>SRA1021805
SRR035083.312363
454 Sequencing (SRP001804)
80
7
-
Lys
TTT
[SRA]
>SRA1021905
SRR035083.326911
454 Sequencing (SRP001804)
108
181
+
Lys
TTT
[SRA]
>SRA1021974
SRR035083.333444
454 Sequencing (SRP001804)
76
149
+
Lys
TTT
[SRA]
>SRA1022034
SRR035083.342640
454 Sequencing (SRP001804)
75
148
+
Lys
TTT
[SRA]
>SRA1022142
SRR035083.359085
454 Sequencing (SRP001804)
298
371
+
Lys
TTT
[SRA]
>SRA1022173
SRR035083.363692
454 Sequencing (SRP001804)
392
319
-
Lys
TTT
[SRA]
>SRA1022177
SRR035083.364129
454 Sequencing (SRP001804)
260
333
+
Lys
TTT
[SRA]
>SRA1022183
SRR035083.364838
454 Sequencing (SRP001804)
99
26
-
Lys
TTT
[SRA]
>SRA1022216
SRR035083.369242
454 Sequencing (SRP001804)
5
78
+
Lys
TTT
[SRA]
>SRA1022263
SRR035083.378561
454 Sequencing (SRP001804)
315
242
-
Lys
TTT
[SRA]
>SRA1022271
SRR035083.379379
454 Sequencing (SRP001804)
228
301
+
Lys
TTT
[SRA]
>SRA1022279
SRR035083.380727
454 Sequencing (SRP001804)
270
343
+
Lys
TTT
[SRA]
>SRA1022432
SRR035083.404784
454 Sequencing (SRP001804)
385
312
-
Lys
TTT
[SRA]
>SRA1022494
SRR035083.413555
454 Sequencing (SRP001804)
428
355
-
Lys
TTT
[SRA]
>SRA1022512
SRR035083.417563
454 Sequencing (SRP001804)
192
265
+
Lys
TTT
[SRA]
>SRA1022514
SRR035083.418538
454 Sequencing (SRP001804)
54
127
+
Lys
TTT
[SRA]
>SRA1022518
SRR035083.419202
454 Sequencing (SRP001804)
273
346
+
Lys
TTT
[SRA]
>SRA1022554
SRR035083.423546
454 Sequencing (SRP001804)
284
211
-
Lys
TTT
[SRA]
>SRA1022601
SRR035083.430985
454 Sequencing (SRP001804)
236
309
+
Lys
TTT
[SRA]
>SRA1022675
SRR035083.440478
454 Sequencing (SRP001804)
453
380
-
Lys
TTT
[SRA]
>SRA1022861
SRR035083.475000
454 Sequencing (SRP001804)
163
236
+
Lys
TTT
[SRA]
>SRA1022896
SRR035083.481353
454 Sequencing (SRP001804)
393
320
-
Lys
TTT
[SRA]
>SRA1022951
SRR035083.493792
454 Sequencing (SRP001804)
324
397
+
Lys
TTT
[SRA]
>SRA1023045
SRR035083.511820
454 Sequencing (SRP001804)
36
109
+
Lys
TTT
[SRA]
>SRA1023051
SRR035083.512127
454 Sequencing (SRP001804)
110
37
-
Lys
TTT
[SRA]
>SRA1023100
SRR035083.519722
454 Sequencing (SRP001804)
104
177
+
Lys
TTT
[SRA]
>SRA1032445
SRR035088.11319
454 Sequencing (SRP001809)
285
212
-
Lys
TTT
[SRA]
>SRA1032782
SRR035088.102627
454 Sequencing (SRP001809)
396
323
-
Lys
TTT
[SRA]
>SRA1032798
SRR035088.105314
454 Sequencing (SRP001809)
125
52
-
Lys
TTT
[SRA]
>SRA1033477
SRR035088.268972
454 Sequencing (SRP001809)
157
230
+
Lys
TTT
[SRA]
>SRA1033828
SRR035088.367893
454 Sequencing (SRP001809)
111
38
-
Lys
TTT
[SRA]
>SRA1034699
SRR035089.155639
454 Sequencing (SRP001810)
287
214
-
Lys
TTT
[SRA]
>SRA1035006
SRR035089.217438
454 Sequencing (SRP001810)
224
151
-
Lys
TTT
[SRA]
>SRA1035095
SRR035089.237058
454 Sequencing (SRP001810)
217
290
+
Lys
TTT
[SRA]
>SRA1035626
SRR035089.342769
454 Sequencing (SRP001810)
288
215
-
Lys
TTT
[SRA]
>SRA1036789
SRR035090.4780
454 Sequencing (SRP001811)
239
312
+
Lys
TTT
[SRA]
>SRA1036869
SRR035090.29670
454 Sequencing (SRP001811)
241
314
+
Lys
TTT
[SRA]
>SRA1036885
SRR035090.31537
454 Sequencing (SRP001811)
227
154
-
Lys
TTT
[SRA]
>SRA1037052
SRR035090.66025
454 Sequencing (SRP001811)
88
15
-
Lys
TTT
[SRA]
>SRA1037161
SRR035090.86257
454 Sequencing (SRP001811)
88
161
+
Lys
TTT
[SRA]
>SRA1037193
SRR035090.91148
454 Sequencing (SRP001811)
88
15
-
Lys
TTT
[SRA]
>SRA1037212
SRR035090.93870
454 Sequencing (SRP001811)
276
349
+
Lys
TTT
[SRA]
>SRA1037246
SRR035090.101895
454 Sequencing (SRP001811)
402
329
-
Lys
TTT
[SRA]
>SRA1037250
SRR035090.102357
454 Sequencing (SRP001811)
240
313
+
Lys
TTT
[SRA]
>SRA1037254
SRR035090.102504
454 Sequencing (SRP001811)
165
238
+
Lys
TTT
[SRA]
>SRA1037259
SRR035090.104096
454 Sequencing (SRP001811)
269
342
+
Lys
TTT
[SRA]
>SRA1037261
SRR035090.104100
454 Sequencing (SRP001811)
200
273
+
Lys
TTT
[SRA]
>SRA1037381
SRR035090.126236
454 Sequencing (SRP001811)
88
161
+
Lys
TTT
[SRA]
>SRA1037392
SRR035090.127923
454 Sequencing (SRP001811)
206
279
+
Lys
TTT
[SRA]
>SRA1037417
SRR035090.131267
454 Sequencing (SRP001811)
225
152
-
Lys
TTT
[SRA]
>SRA1037460
SRR035090.137997
454 Sequencing (SRP001811)
88
161
+
Lys
TTT
[SRA]
>SRA1037538
SRR035090.150147
454 Sequencing (SRP001811)
261
188
-
Lys
TTT
[SRA]
>SRA1037586
SRR035090.158601
454 Sequencing (SRP001811)
244
317
+
Lys
TTT
[SRA]
>SRA1037654
SRR035090.169930
454 Sequencing (SRP001811)
203
276
+
Lys
TTT
[SRA]
>SRA1037665
SRR035090.171581
454 Sequencing (SRP001811)
476
403
-
Lys
TTT
[SRA]
>SRA1037677
SRR035090.172986
454 Sequencing (SRP001811)
458
385
-
Lys
TTT
[SRA]
>SRA1037768
SRR035090.191683
454 Sequencing (SRP001811)
362
289
-
Lys
TTT
[SRA]
>SRA1037792
SRR035090.196468
454 Sequencing (SRP001811)
102
175
+
Lys
TTT
[SRA]
>SRA1037806
SRR035090.199553
454 Sequencing (SRP001811)
300
373
+
Lys
TTT
[SRA]
>SRA1037851
SRR035090.204676
454 Sequencing (SRP001811)
158
85
-
Lys
TTT
[SRA]
>SRA1037897
SRR035090.215759
454 Sequencing (SRP001811)
168
241
+
Lys
TTT
[SRA]
>SRA1037909
SRR035090.216909
454 Sequencing (SRP001811)
243
316
+
Lys
TTT
[SRA]
>SRA1037937
SRR035090.221364
454 Sequencing (SRP001811)
301
374
+
Lys
TTT
[SRA]
>SRA1037945
SRR035090.224066
454 Sequencing (SRP001811)
355
282
-
Lys
TTT
[SRA]
>SRA1037954
SRR035090.226296
454 Sequencing (SRP001811)
238
311
+
Lys
TTT
[SRA]
>SRA1038007
SRR035090.232936
454 Sequencing (SRP001811)
173
100
-
Lys
TTT
[SRA]
>SRA1038105
SRR035090.246353
454 Sequencing (SRP001811)
246
319
+
Lys
TTT
[SRA]
>SRA1038143
SRR035090.253742
454 Sequencing (SRP001811)
249
176
-
Lys
TTT
[SRA]
>SRA1038228
SRR035090.268523
454 Sequencing (SRP001811)
173
246
+
Lys
TTT
[SRA]
>SRA1038396
SRR035090.297321
454 Sequencing (SRP001811)
337
264
-
Lys
TTT
[SRA]
>SRA1038404
SRR035090.298479
454 Sequencing (SRP001811)
355
282
-
Lys
TTT
[SRA]
>SRA1038430
SRR035090.303130
454 Sequencing (SRP001811)
326
399
+
Lys
TTT
[SRA]
>SRA1038527
SRR035090.320703
454 Sequencing (SRP001811)
73
146
+
Lys
TTT
[SRA]
>SRA1038540
SRR035090.324233
454 Sequencing (SRP001811)
322
395
+
Lys
TTT
[SRA]
>SRA1038572
SRR035090.329452
454 Sequencing (SRP001811)
307
234
-
Lys
TTT
[SRA]
>SRA1038584
SRR035090.331742
454 Sequencing (SRP001811)
345
272
-
Lys
TTT
[SRA]
>SRA1038672
SRR035090.347618
454 Sequencing (SRP001811)
270
197
-
Lys
TTT
[SRA]
>SRA1038723
SRR035090.354591
454 Sequencing (SRP001811)
284
211
-
Lys
TTT
[SRA]
>SRA1038756
SRR035090.360690
454 Sequencing (SRP001811)
313
240
-
Lys
TTT
[SRA]
>SRA1038772
SRR035090.363215
454 Sequencing (SRP001811)
338
265
-
Lys
TTT
[SRA]
>SRA1038831
SRR035090.375949
454 Sequencing (SRP001811)
268
195
-
Lys
TTT
[SRA]
>SRA1038844
SRR035090.379026
454 Sequencing (SRP001811)
50
123
+
Lys
TTT
[SRA]
>SRA1038902
SRR035090.391365
454 Sequencing (SRP001811)
314
241
-
Lys
TTT
[SRA]
>SRA1038922
SRR035090.395377
454 Sequencing (SRP001811)
268
195
-
Lys
TTT
[SRA]
>SRA1038924
SRR035090.395717
454 Sequencing (SRP001811)
37
110
+
Lys
TTT
[SRA]
>SRA1039010
SRR035090.407291
454 Sequencing (SRP001811)
209
282
+
Lys
TTT
[SRA]
>SRA1039119
SRR035090.428839
454 Sequencing (SRP001811)
324
397
+
Lys
TTT
[SRA]
>SRA1039171
SRR035090.436892
454 Sequencing (SRP001811)
226
153
-
Lys
TTT
[SRA]
>SRA1039292
SRR035090.459946
454 Sequencing (SRP001811)
271
198
-
Lys
TTT
[SRA]
>SRA1039315
SRR035090.465504
454 Sequencing (SRP001811)
314
241
-
Lys
TTT
[SRA]
>SRA1039335
SRR035090.469813
454 Sequencing (SRP001811)
106
33
-
Lys
TTT
[SRA]
>SRA1039386
SRR035090.481743
454 Sequencing (SRP001811)
351
424
+
Lys
TTT
[SRA]
>SRA1039561
SRR035090.516930
454 Sequencing (SRP001811)
337
264
-
Lys
TTT
[SRA]
>SRA1039649
SRR035090.535693
454 Sequencing (SRP001811)
63
136
+
Lys
TTT
[SRA]
>SRA1039724
SRR035090.554090
454 Sequencing (SRP001811)
115
188
+
Lys
TTT
[SRA]
>SRA1039799
SRR035090.572715
454 Sequencing (SRP001811)
123
50
-
Lys
TTT
[SRA]
>SRA1039861
SRR035090.585650
454 Sequencing (SRP001811)
227
154
-
Lys
TTT
[SRA]
>SRA1039925
SRR035090.605121
454 Sequencing (SRP001811)
318
245
-
Lys
TTT
[SRA]
>SRA1040604
SRR035091.121922
454 Sequencing (SRP001812)
183
256
+
Lys
TTT
[SRA]
>SRA1041795
SRR035091.296479
454 Sequencing (SRP001812)
184
257
+
Lys
TTT
[SRA]
>SRA1041838
SRR035091.303482
454 Sequencing (SRP001812)
201
128
-
Lys
TTT
[SRA]
>SRA1045171
SRR035093.18861
454 Sequencing (SRP001814)
108
181
+
Lys
TTT
[SRA]
>W2011502943
RXYJ01000004
Chlorobiota
Chlorobium phaeovibrioides GrKhr17 [RXYJ]
30770
30843
+
Lys
TTT
[ENA]
¡û
>W2011502971
RXYK01000003
Chlorobiota
Chlorobium phaeovibrioides BrKhr17 [RXYK]
45953
46026
+
Lys
TTT
[ENA]
¡û
>W2011609967
SJPA01000001
Chlorobiota
Chlorobium sp. N1 [SJPA]
676592
676519
-
Lys
TTT
[ENA]
¡û
>SRA1047472
SRR035093.548684
454 Sequencing (SRP001814)
291
364
+
Lys
TTT
[SRA]
>W2012093247
VMRG01000002
Chlorobiota
Chlorobium phaeovibrioides GrTcv12 [VMRG]
89119
89192
+
Lys
TTT
[ENA]
¡û
>SRA1052748
SRR035098.265737
454 Sequencing (SRP001819)
211
284
+
Lys
TTT
[SRA]
>SRA1053987
SRR035099.26555
454 Sequencing (SRP001820)
316
389
+
Lys
TTT
[SRA]
>SRA1054145
SRR035099.69803
454 Sequencing (SRP001820)
212
285
+
Lys
TTT
[SRA]
>SRA1054351
SRR035099.114707
454 Sequencing (SRP001820)
371
298
-
Lys
TTT
[SRA]
>SRA1054511
SRR035099.150241
454 Sequencing (SRP001820)
180
253
+
Lys
TTT
[SRA]
>SRA1054542
SRR035099.158870
454 Sequencing (SRP001820)
247
320
+
Lys
TTT
[SRA]
>SRA1054766
SRR035099.208392
454 Sequencing (SRP001820)
15
88
+
Lys
TTT
[SRA]
>SRA1054851
SRR035099.231543
454 Sequencing (SRP001820)
238
165
-
Lys
TTT
[SRA]
>SRA1054868
SRR035099.239222
454 Sequencing (SRP001820)
197
124
-
Lys
TTT
[SRA]
>W2012440394
WUBZ01000011
Chlorobiota
Chlorobium phaeovibrioides ZM [WUBZ]
29913
29986
+
Lys
TTT
[ENA]
¡û
>C201100849
CP041698
Chlorobiota
Chlorobium phaeovibrioides PhvTcv-s14 [CP041698]
325853
325926
+
Lys
TTT
-
¡û
>W1610977665
LVWG01000035
Chlorobiota
Pelodictyon luteolum [LVWG]
94228
94153
-
Lys
TTT
[ENA]
¡û
Identical group No.526996 (16 seq.)
>W1710858984
LMBR01000059
Chlorobiota
Chlorobium limicola [LMBR]
47
120
+
Lys
TTT
[ENA]
¡û
>W1710858987
LMBR01000062
Chlorobiota
Chlorobium limicola [LMBR]
77
4
-
Lys
TTT
[ENA]
¡û
>W1711626086
MPJE01000066
Chlorobiota
Chlorobium sp. KB01 [MPJE]
49857
49784
-
Lys
TTT
[ENA]
¡û
>C005292
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
539473
539545
+
Lys
TTT
[Ensembl]
¡û
>C006578
CP000492
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [CP000492]
436026
436098
+
Lys
TTT
[Ensembl]
¡û
>w018030
AASE01000006
Chlorobiota
Chlorobium ferrooxidans DSM 13031 [AASE]
2479
2402
-
Lys
TTT
[ENA]
¡û
>w007193
AAIK01000009
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [AAIK]
60492
60569
+
Lys
TTT
[ENA]
¡û
>w006108
AAHJ01000007
Chlorobiota
Chlorobium limicola DSM 245 [AAHJ]
5477
5402
-
Lys
TTT
[ENA]
¡û
>C08003493
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
359328
359401
+
Lys
TTT
[Ensembl]
¡û
>C08007687
CP001110
Chlorobiota
Pelodictyon phaeoclathratiforme BU-1 [CP001110]
412224
412297
+
Lys
TTT
[Ensembl]
¡û
>WENV170624643
FUWD013184439
[FUWD] metagenome; unknown
13103
13030
-
Lys
TTT
[ENA]
¡û
>WENV170632924
FUWD013388832
[FUWD] metagenome; unknown
13103
13030
-
Lys
TTT
[ENA]
¡û
>W09102672
AAIB01000038
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [AAIB]
1172
1099
-
Lys
TTT
[ENA]
¡û
>W2010532714
JAAORA010000002
Chlorobiota
Chlorobium sp. BLA1 [JAAORA]
279234
279307
+
Lys
TTT
[ENA]
¡û
>W1610721330
LMBR01000059
Chlorobiota
Chlorobium limicola [LMBR]
47
120
+
Lys
TTT
[ENA]
¡û
>W1610721333
LMBR01000062
Chlorobiota
Chlorobium limicola [LMBR]
77
4
-
Lys
TTT
[ENA]
¡û
Identical group No.538413 (24 seq.)
>C171049445
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
446976
447049
+
Lys
TTT
-
¡û
>C171113994
CP020873
Chlorobiota
Prosthecochloris sp. HL-130-GSB [CP020873]
387533
387608
+
Lys
TTT
-
¡û
>w007178
AAIJ01000034
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
7836
7759
-
Lys
TTT
[ENA]
¡û
>w006962
AAIC01000030
Chlorobiota
Chlorobium phaeobacteroides BS1 [AAIC]
8075
7998
-
Lys
TTT
[ENA]
¡û
>WENV181232301
OFEN01000004
[OFEN] coral metagenome; NA
39635
39708
+
Lys
TTT
[ENA]
¡û
>WENV181232315
OFEN01000024
[OFEN] coral metagenome; NA
10268
10195
-
Lys
TTT
[ENA]
¡û
>WENV181233207
OFES01000003
[OFES] coral metagenome; NA
74767
74840
+
Lys
TTT
[ENA]
¡û
>WENV181233226
OFES01000012
[OFES] coral metagenome; NA
85753
85826
+
Lys
TTT
[ENA]
¡û
>WENV181303848
OFHR01000006
[OFHR] coral metagenome; NA
52800
52727
-
Lys
TTT
[ENA]
¡û
>C08003634
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
450178
450253
+
Lys
TTT
[Ensembl]
¡û
>C08003610
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
1941768
1941695
-
Lys
TTT
[Ensembl]
¡û
>C08007153
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
426204
426279
+
Lys
TTT
[Ensembl]
¡û
>WENV183512881
OMKS01001668
[OMKS] sediment metagenome; hot spring sediment
2578
2505
-
Lys
TTT
[ENA]
¡û
>C181068770
CP022571
Chlorobiota
Prosthecochloris sp. GSB1 TY Vent [CP022571]
459974
460047
+
Lys
TTT
-
¡û
>W1810062182
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
2521958
2521885
-
Lys
TTT
[ENA]
¡û
>W1810062218
PDNY01000003
Chlorobiota
Prosthecochloris sp. ZM_2 [PDNY]
118111
118184
+
Lys
TTT
[ENA]
¡û
>W1810062265
PDNZ01000003
Chlorobiota
Prosthecochloris marina V1 [PDNZ]
86025
85952
-
Lys
TTT
[ENA]
¡û
>W2010640194
JABVZQ010000009
Chlorobiota
Prosthecochloris sp. DSM 1685 [JABVZQ]
61156
61229
+
Lys
TTT
[ENA]
¡û
>W2011543743
SDGU01000009
Chlorobiota
Chlorobaculum sp. 24CR [SDGU]
98833
98760
-
Lys
TTT
[ENA]
¡û
>W2011980206
VDCI01000004
Chlorobiota
Prosthecochloris vibrioformis DSM 260 [VDCI]
58726
58799
+
Lys
TTT
[ENA]
¡û
>W2110315967
JADGIH010000009
Chlorobiota
Prosthecochloris ethylica N2 [JADGIH]
13997
13924
-
Lys
TTT
[ENA]
¡û
>W2110316000
JADGII010000008
Chlorobiota
Prosthecochloris ethylica N3 [JADGII]
99796
99869
+
Lys
TTT
[ENA]
¡û
>C231534729
CP110622
Chlorobiota
Prosthecochloris sp. SCSIO W1103 [CP110622]
2392393
2392320
-
Lys
TTT
-
¡û
>C231534775
CP110623
Chlorobiota
Prosthecochloris sp. SCSIO W1101 [CP110623]
2588431
2588358
-
Lys
TTT
-
¡û
Identical group No.538435 (2 seq.)
>w006111
AAHJ01000010
Chlorobiota
Chlorobium limicola DSM 245 [AAHJ]
36491
36568
+
Lys
TTT
[ENA]
¡û
>C08003505
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
2004883
2004958
+
Lys
TTT
[Ensembl]
¡û
Identical group No.548210 (1 seq.)
>C08003821
CP001100
Chlorobiota
Chloroherpeton thalassium ATCC 35110 [CP001100]
1867861
1867788
-
Lys
TTT
[Ensembl]
¡û
Identical group No.592530 (8 seq.)
>W1711136061
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
376878
376805
-
Lys
TTT
[ENA]
¡û
>C171060555
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
275252
275325
+
Lys
TTT
-
¡û
>C007009
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
275856
275928
+
Lys
TTT
[Ensembl]
¡û
>WENV170620038
FUWD013024777
[FUWD] metagenome; unknown
3667
3740
+
Lys
TTT
[ENA]
¡û
>WENV170628169
FUWD013242742
[FUWD] metagenome; unknown
3667
3740
+
Lys
TTT
[ENA]
¡û
>W2011980162
VDCH01000009
Chlorobiota
Chlorobaculum thiosulfatiphilum DSM 249 [VDCH]
50985
51058
+
Lys
TTT
[ENA]
¡û
>C231486372
CP104202
Chlorobiota
Chlorobaculum sp. MV4-Y [CP104202]
223320
223393
+
Lys
TTT
-
¡û
>W1610947181
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
376878
376805
-
Lys
TTT
[ENA]
¡û
Identical group No.595770 (1 seq.)
>W141803616
JPGV01000009
Chlorobiota
[Candidatus Thermochlorobacteriaceae] bacterium GBChlB GBChlB [JPGV]
215397
215470
+
Lys
TTT
[ENA]
¡û
Identical group No.612377 (3 seq.)
>W2110425946
JAELUC010000140
Bacteroidota
Pedobacter sp. ASV12 [JAELUC]
439
366
-
Lys
TTT
[ENA]
¡û
>W2110425949
JAELUC010000262
Bacteroidota
Pedobacter sp. ASV12 [JAELUC]
180
253
+
Lys
TTT
[ENA]
¡û
>C211198531
CP065014
Chlorobiota
Chlorobi bacterium [CP065014]
9676
9603
-
Lys
TTT
-
¡û
Identical group No.664441 (2 seq.)
>W1710887488
LMYZ01000098
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
4512
4439
-
Lys
TTT
[ENA]
¡û
>W1610748188
LMYZ01000098
Chlorobiota
Chlorobi bacterium OLB7 [LMYZ]
4512
4439
-
Lys
TTT
[ENA]
¡û
Identical group No.681353 (1 seq.)
>W2011610000
SJPA01000009
Chlorobiota
Chlorobium sp. N1 [SJPA]
31622
31697
+
Lys
TTT
[ENA]
¡û
Identical group No.793722 (2 seq.)
>W1610552297
JYPE01000004
Chlorobiota
Chlorobi bacterium OLB4 [JYPE]
38806
38732
-
Lys
TTT
[ENA]
¡û
>W1710662962
JYPE01000004
Chlorobiota
Chlorobi bacterium OLB4 [JYPE]
38806
38732
-
Lys
TTT
[ENA]
¡û
Identical group No.827896 (2 seq.)
>W1710856720
LLZO01000104
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
23962
24036
+
Lys
TTT
[ENA]
¡û
>W1610719101
LLZO01000104
Chlorobiota
Chlorobi bacterium OLB5 [LLZO]
23962
24036
+
Lys
TTT
[ENA]
¡û
Identical group No.831068 (2 seq.)
>W1610594309
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
482301
482226
-
Lys
TTT
[ENA]
¡û
>W1710713761
LDXS01000001
Chlorobiota
Chlorobi bacterium NICIL-2 [LDXS]
482301
482226
-
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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