This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Cyanobacteriota
Anticodon = TAG
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.325067 (18 seq.)
>W131058330
ANFJ01000002
Cyanobacteriota
Fortiea contorta PCC 7126 [ANFJ]
4840153
4840227
+
Leu
TAG
[ENA]
¡û
>W1711711452
MTAX01000103
Cyanobacteriota
Nostoc sp. RF31YmG RF31Y [MTAX]
24493
24567
+
Leu
TAG
[ENA]
¡û
>PL171000203
AP018275
Cyanobacteria
Calothrix sp. NIES-4101 plasmid:plasmid2
11703
11777
+
Leu
TAG
[ENA]
¡û
>PL191000392
CP023279
Cyanobacteria
Nostoc sp. CENA543 plasmid:pCENA543c (CP023279)
2496
2422
-
Leu
TAG
[ENA]
¡û
>PL201000413
CP040279
Cyanobacteriota
Nostoc sp. C052 plasmid:pC052_G [CP040279]
88429
88355
-
Leu
TAG
[ENA]
¡û
>W2010745625
JACKZU010000342
Cyanobacteriota
Nostoc sp. 2RC [JACKZU]
5175
5249
+
Leu
TAG
[ENA]
¡û
>W2110229581
JACJQI010000039
Cyanobacteriota
Aulosira sp. FACHB-113 [JACJQI]
55942
56016
+
Leu
TAG
[ENA]
¡û
>W2110229627
JACJQJ010000022
Cyanobacteriota
Nostoc linckia FACHB-104 [JACJQJ]
91697
91771
+
Leu
TAG
[ENA]
¡û
>W2110229665
JACJQJ010000151
Cyanobacteriota
Nostoc linckia FACHB-104 [JACJQJ]
1885
1959
+
Leu
TAG
[ENA]
¡û
>W2110229779
JACJQL010000048
Cyanobacteriota
Nostoc parmelioides FACHB-3921 [JACJQL]
7005
7079
+
Leu
TAG
[ENA]
¡û
>W2110229820
JACJQM010000024
Cyanobacteriota
Nostoc sp. FACHB-888 [JACJQM]
41314
41388
+
Leu
TAG
[ENA]
¡û
>W2110231574
JACJRV010000056
Cyanobacteriota
Nostoc sp. FACHB-152 [JACJRV]
27284
27210
-
Leu
TAG
[ENA]
¡û
>W2110312539
JADEXL010000117
Cyanobacteriota
Tolypothrix sp. LEGE 11397 [JADEXL]
4519
4444
-
Leu
TAG
[ENA]
¡û
>C201083658
CP040094
Cyanobacteriota
Nostoc sp. TCL240-02 [CP040094]
4533179
4533105
-
Leu
TAG
-
¡û
>C231097681
CP063785
Cyanobacteriota
Tolypothrix sp. PCC 7712 [CP063785]
3916987
3916912
-
Leu
TAG
-
¡û
>C231102995
CP064879
Cyanobacteriota
Tolypothrix sp. PCC 7601 [CP064879]
646927
647002
+
Leu
TAG
-
¡û
>W1610003542
AGCR01000038
Cyanobacteriota
Tolypothrix sp. PCC 7601 [AGCR]
30646
30571
-
Leu
TAG
[ENA]
¡û
>W1710004162
AGCR01000038
Cyanobacteriota
Tolypothrix sp. PCC 7601 [AGCR]
30646
30571
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK