This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Dictyoglomota
Anticodon = GAT
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.339691 (7 seq.)
>WENV181408935
OGCH01024970
[OGCH] hot springs metagenome; hot springs
785
709
-
Ile
GAT
[ENA]
¢þ
>W09113480
ABYR01000001
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [ABYR]
172935
172859
-
Ile
GAT
[ENA]
¡û
>W09113482
ABYR01000001
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [ABYR]
171197
171121
-
Ile
GAT
[ENA]
¡û
>W09113484
ABYR01000001
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [ABYR]
169607
169531
-
Ile
GAT
[ENA]
¡û
>W09113486
ABYR01000001
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [ABYR]
167890
167814
-
Ile
GAT
[ENA]
¡û
>C09104313
CP001146
Dictyoglomota
Dictyoglomus thermophilum H-6-12 H-6-12; ATCC 35947 [CP001146]
1077264
1077188
-
Ile
GAT
[Ensembl]
¡û
>C09104361
CP001251
Dictyoglomota
Dictyoglomus turgidum DSM 6724 [CP001251]
1244153
1244077
-
Ile
GAT
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK