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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = CCA
HIT:
8 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.541121 (1 seq.)
>CHL090103287
X70810
Euglenozoa
Euglena gracilis
100682
100608
-
Trp
CCA
[ENA]
¡û
Identical group No.561490 (1 seq.)
>CHL1810008838
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
89503
89578
+
Trp
CCA
[ENA]
¡û
Identical group No.581951 (3 seq.)
>CHL1810017494
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
37724
37798
+
Trp
CCA
[ENA]
¡û
>CHL1810017573
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
29104
29178
+
Trp
CCA
[ENA]
¡û
>CHL1810018211
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
34976
35049
+
Trp
CCA
[ENA]
¡û
Identical group No.601839 (1 seq.)
>CHL1810017546
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
33298
33372
+
Trp
CCA
[ENA]
¡û
Identical group No.611283 (1 seq.)
>CHL1810017694
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
47930
47858
-
Trp
CCA
[ENA]
¡û
Identical group No.627284 (1 seq.)
>CHL1810006171
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
25318
25392
+
Trp
CCA
[ENA]
¡û
Identical group No.648350 (1 seq.)
>CHL090100442
AJ294725
Euglenozoa
Euglena longa
60662
60588
-
Trp
CCA
[ENA]
¡û
Identical group No.652658 (1 seq.)
>CHL1810005337
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
72827
72753
-
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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