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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = GAA
HIT:
7 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.541119 (1 seq.)
>CHL090103271
X70810
Euglenozoa
Euglena gracilis
60922
60994
+
Phe
GAA
[ENA]
¡û
Identical group No.561489 (1 seq.)
>CHL1810008832
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
48115
48189
+
Phe
GAA
[ENA]
¡û
Identical group No.581955 (1 seq.)
>CHL1810017504
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
72344
72272
-
Phe
GAA
[ENA]
¡û
Identical group No.601842 (4 seq.)
>CHL1810006180
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
47661
47589
-
Phe
GAA
[ENA]
¡û
>CHL1810017555
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
60623
60551
-
Phe
GAA
[ENA]
¡û
>CHL1810017582
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
52054
51982
-
Phe
GAA
[ENA]
¡û
>CHL1810018220
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
63571
63499
-
Phe
GAA
[ENA]
¡û
Identical group No.611286 (1 seq.)
>CHL1810017699
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
20620
20546
-
Phe
GAA
[ENA]
¡û
Identical group No.648347 (1 seq.)
>CHL090100426
AJ294725
Euglenozoa
Euglena longa
9421
9493
+
Phe
GAA
[ENA]
¡û
Identical group No.652656 (1 seq.)
>CHL1810005325
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
51280
51352
+
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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