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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = GAT
HIT:
6 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.352279 (3 seq.)
>CHL090103276
X70810
Euglenozoa
Euglena gracilis
130709
130635
-
Ile
GAT
[ENA]
¡û
>CHL090103278
X70810
Euglenozoa
Euglena gracilis
124791
124717
-
Ile
GAT
[ENA]
¡û
>CHL090103280
X70810
Euglenozoa
Euglena gracilis
118873
118799
-
Ile
GAT
[ENA]
¡û
Identical group No.370766 (1 seq.)
>CHL1810008844
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
76720
76647
-
Ile
GAT
[ENA]
¡û
Identical group No.388403 (2 seq.)
>CHL1810006175
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
72472
72397
-
Ile
GAT
[ENA]
¡û
>CHL1810017498
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
104686
104611
-
Ile
GAT
[ENA]
¡û
Identical group No.406248 (4 seq.)
>CHL1810005332
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
89361
89285
-
Ile
GAT
[ENA]
¡û
>CHL1810017550
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
86134
86058
-
Ile
GAT
[ENA]
¡û
>CHL1810017577
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
78188
78112
-
Ile
GAT
[ENA]
¡û
>CHL1810018215
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
93926
93851
-
Ile
GAT
[ENA]
¡û
Identical group No.447088 (1 seq.)
>CHL090100446
AJ294725
Euglenozoa
Euglena longa
39246
39171
-
Ile
GAT
[ENA]
¡û
Identical group No.611281 (1 seq.)
>CHL1810017685
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
83296
83222
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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