This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Fidelibacterota
Anticodon = GTT
HIT:
4 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.346694 (1 seq.)
>W2011536522
SCKK01000001
Fidelibacterota
Candidatus Marinimicrobia bacterium TS1B10-2 [SCKK]
127050
127123
+
Asn
GTT
[ENA]
¡û
Identical group No.346696 (1 seq.)
>W2011536528
SCKK01000007
Fidelibacterota
Candidatus Marinimicrobia bacterium TS1B10-2 [SCKK]
43241
43314
+
Asn
GTT
[ENA]
¡û
Identical group No.411888 (1 seq.)
>W2011536448
SCKI01000004
Fidelibacterota
Candidatus Marinimicrobia bacterium TS1B11 [SCKI]
82121
82048
-
Asn
GTT
[ENA]
¡û
Identical group No.520830 (1 seq.)
>W2011536490
SCKJ01000003
Fidelibacterota
Candidatus Marinimicrobia bacterium TS1B10-1 [SCKJ]
251854
251782
-
Asn
GTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK