This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Fidelibacterota
Anticodon = TGT
HIT:
3 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.346697 (1 seq.)
>W2011536533
SCKK01000015
Fidelibacterota
Candidatus Marinimicrobia bacterium TS1B10-2 [SCKK]
39382
39455
+
Thr
TGT
[ENA]
¡û
Identical group No.346959 (3 seq.)
>W2011665657
SORS01000001
Fidelibacterota
Candidatus Marinimicrobia bacterium MT.SAG.4 [SORS]
105028
105101
+
Thr
TGT
[ENA]
¡û
>W2011665691
SORT01000009
Fidelibacterota
Candidatus Marinimicrobia bacterium MT.SAG.3 [SORT]
33287
33360
+
Thr
TGT
[ENA]
¡û
>W2011665710
SORU01000002
Fidelibacterota
Candidatus Marinimicrobia bacterium MT.SAG.2 [SORU]
46224
46297
+
Thr
TGT
[ENA]
¡û
Identical group No.411884 (2 seq.)
>W2011536440
SCKI01000002
Fidelibacterota
Candidatus Marinimicrobia bacterium TS1B11 [SCKI]
149389
149316
-
Thr
TGT
[ENA]
¡û
>W2011536504
SCKJ01000006
Fidelibacterota
Candidatus Marinimicrobia bacterium TS1B10-1 [SCKJ]
122073
122000
-
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK