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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Minisyncoccota
Anticodon = CTG
HIT:
2 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.882137 (2 seq.)
>W1910716683
MFWQ01000034
Minisyncoccota
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_01_FULL_46_10 [MFWQ]
5016
4945
-
Gln
CTG
[ENA]
¡û
>W2010850109
MFWQ01000034
Minisyncoccota
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_01_FULL_46_10 [MFWQ]
5016
4945
-
Gln
CTG
[ENA]
¡û
Identical group No.882139 (6 seq.)
>W1910716703
MFWR01000006
Minisyncoccota
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_01_FULL_46_16 [MFWR]
74390
74319
-
Gln
CTG
[ENA]
¡û
>W1910716746
MFWS01000048
Minisyncoccota
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_02_FULL_46_9 [MFWS]
32677
32606
-
Gln
CTG
[ENA]
¡û
>W1910716774
MFWU01000013
Minisyncoccota
Candidatus Pacebacteria bacterium RIFCSPLOWO2_01_FULL_47_12 [MFWU]
20833
20762
-
Gln
CTG
[ENA]
¡û
>W2010850129
MFWR01000006
Minisyncoccota
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_01_FULL_46_16 [MFWR]
74390
74319
-
Gln
CTG
[ENA]
¡û
>W2010850172
MFWS01000048
Minisyncoccota
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_02_FULL_46_9 [MFWS]
32677
32606
-
Gln
CTG
[ENA]
¡û
>W2010850200
MFWU01000013
Minisyncoccota
Candidatus Pacebacteria bacterium RIFCSPLOWO2_01_FULL_47_12 [MFWU]
20833
20762
-
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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