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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Myoviridae
Anticodon = CAC
HIT:
4 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.460845 (3 seq.)
>PHG0300086
DQ398053
Myoviridae
Mycobacterium phage Catera Brazil-1 (DQ398053)
92529
92602
+
Val
CAC
[ENA]
¡û
>PHG14300034
GQ303260
Myoviridae
Mycobacterium phage ET08 ATCC 35860-B1 (GQ303260)
93340
93413
+
Val
CAC
[ENA]
¡û
>PHG14300187
JN412592
Myoviridae
Mycobacterium phage LinStu Patience (JN412592)
94199
94272
+
Val
CAC
[ENA]
¡û
Identical group No.480678 (49 seq.)
>PHG0300028
AY129337
Myoviridae
Mycobacterium phage Bxz1 PaP3 (AY129337)
96648
96721
+
Val
CAC
[ENA]
¡û
>PHG0300108
EU826467
Myoviridae
Mycobacterium phage Rizal N4 (EU826467)
92270
92343
+
Val
CAC
[ENA]
¡û
>PHG0300113
EU826468
Myoviridae
Mycobacterium phage Spud N4 (EU826468)
94407
94480
+
Val
CAC
[ENA]
¡û
>PHG0300118
EU826469
Myoviridae
Mycobacterium phage ScottMcG N4 (EU826469)
93291
93364
+
Val
CAC
[ENA]
¡û
>PHG0300123
EU826471
Myoviridae
Mycobacterium phage Cali N4 (EU826471)
94730
94803
+
Val
CAC
[ENA]
¡û
>PHG183000142
KR080196
Myoviridae
Mycobacterium phage Momo (KR080196)
93193
93266
+
Val
CAC
[ENA]
¡û
>PHG183000210
KT281790
Myoviridae
Mycobacterium phage HyRo (KT281790)
93517
93590
+
Val
CAC
[ENA]
¡û
>PHG183000223
KT321476
Myoviridae
Mycobacterium phage Zeenon (KT321476)
94191
94264
+
Val
CAC
[ENA]
¡û
>PHG183000242
KT365398
Myoviridae
Mycobacterium phage DTDevon (KT365398)
95717
95790
+
Val
CAC
[ENA]
¡û
>PHG183000250
KT365400
Myoviridae
Mycobacterium phage ErnieJ (KT365400)
92919
92992
+
Val
CAC
[ENA]
¡û
>PHG183000451
KX369583
Myoviridae
Mycobacterium phage Littleton (KX369583)
94353
94426
+
Val
CAC
[ENA]
¡û
>PHG183000513
KX721255
Myoviridae
Mycobacterium phage Yucca (KX721255)
94105
94178
+
Val
CAC
[ENA]
¡û
>PHG183000518
KX721256
Myoviridae
Mycobacterium phage Erdmann (KX721256)
94960
95033
+
Val
CAC
[ENA]
¡û
>PHG183000525
KX752698
Myoviridae
Mycobacterium phage Tonenili (KX752698)
98626
98699
+
Val
CAC
[ENA]
¡û
>PHG183000532
KX781992
Myoviridae
Mycobacterium phage Gabriel (KX781992)
93210
93283
+
Val
CAC
[ENA]
¡û
>PHG183000541
KX831080
Myoviridae
Mycobacterium phage Lukilu (KX831080)
95007
95080
+
Val
CAC
[ENA]
¡û
>PHG183001069
MF919493
Myoviridae
Mycobacterium phage Audrick (MF919493)
93875
93948
+
Val
CAC
[ENA]
¡û
>PHG183001077
MF919494
Myoviridae
Mycobacterium phage BeanWater (MF919494)
93583
93656
+
Val
CAC
[ENA]
¡û
>PHG183001085
MF919495
Myoviridae
Mycobacterium phage Bigswole (MF919495)
96339
96412
+
Val
CAC
[ENA]
¡û
>PHG183001092
MF919499
Myoviridae
Mycobacterium phage Daffodil (MF919499)
94292
94365
+
Val
CAC
[ENA]
¡û
>PHG183001101
MF919513
Myoviridae
Mycobacterium phage Koguma (MF919513)
92141
92214
+
Val
CAC
[ENA]
¡û
>PHG183001111
MF919527
Myoviridae
Mycobacterium phage Phox (MF919527)
95031
95104
+
Val
CAC
[ENA]
¡û
>PHG183001400
MG812493
Myoviridae
Mycobacterium phage NuevoMundo (MG812493)
96914
96987
+
Val
CAC
[ENA]
¡û
>PHG183001409
MG812494
Myoviridae
Mycobacterium phage Pier (MG812494)
96456
96529
+
Val
CAC
[ENA]
¡û
>PHG183001420
MG872839
Myoviridae
Mycobacterium phage LifeSavor (MG872839)
94077
94150
+
Val
CAC
[ENA]
¡û
>PHG183001542
MH051260
Myoviridae
Mycobacterium phage InterFolia (MH051260)
96209
96282
+
Val
CAC
[ENA]
¡û
>PHG183001550
MH051261
Myoviridae
Mycobacterium phage Tyke (MH051261)
95406
95479
+
Val
CAC
[ENA]
¡û
>PHG183001557
MH051266
Myoviridae
Mycobacterium phage MikeLiesIn (MH051266)
95175
95248
+
Val
CAC
[ENA]
¡û
>PHG183001620
MH316561
Myoviridae
Mycobacterium phage Derek (MH316561)
94591
94664
+
Val
CAC
[ENA]
¡û
>PHG183001627
MH316567
Myoviridae
Mycobacterium phage ParkTD (MH316567)
94289
94362
+
Val
CAC
[ENA]
¡û
>PHG14300038
GQ303262
Myoviridae
Mycobacterium phage LRRHood ATCC 35860-B1 (GQ303262)
93997
94070
+
Val
CAC
[ENA]
¡û
>PHG14300131
JF704092
Myoviridae
Mycobacterium phage Alice MB56Spyo045 (JF704092)
93553
93626
+
Val
CAC
[ENA]
¡û
>PHG14300136
JF704096
Myoviridae
Mycobacterium phage Ghost MB56Spyo045 (JF704096)
93896
93969
+
Val
CAC
[ENA]
¡û
>PHG14300142
JF704116
Myoviridae
Mycobacterium phage Drazdys (JF704116)
94260
94333
+
Val
CAC
[ENA]
¡û
>PHG14300165
JN204348
Myoviridae
Mycobacterium phage Sebata (JN204348)
95405
95478
+
Val
CAC
[ENA]
¡û
>PHG14300181
JN412588
Myoviridae
Mycobacterium phage Dandelion (JN412588)
97704
97777
+
Val
CAC
[ENA]
¡û
>PHG14300194
JN624850
Myoviridae
Mycobacterium phage Pleione (JN624850)
94420
94493
+
Val
CAC
[ENA]
¡û
>PHG14300203
JN699013
Myoviridae
Mycobacterium phage Pio ThreeOh3D2 (JN699013)
97304
97377
+
Val
CAC
[ENA]
¡û
>PHG14300208
JN699625
Myoviridae
Mycobacterium phage Wally ThreeOh3D2 (JN699625)
93387
93460
+
Val
CAC
[ENA]
¡û
>PHG14300213
JN699626
Myoviridae
Mycobacterium phage MoMoMixon (JN699626)
93746
93819
+
Val
CAC
[ENA]
¡û
>PHG14300219
JN699627
Myoviridae
Mycobacterium phage Nappy (JN699627)
95308
95381
+
Val
CAC
[ENA]
¡û
>PHG14300257
JQ911768
Myoviridae
Mycobacterium phage Ava3 Lu11 (JQ911768)
93724
93797
+
Val
CAC
[ENA]
¡û
>PHG14300363
KC691257
Myoviridae
Mycobacterium phage Astraea Gb1 (KC691257)
93283
93356
+
Val
CAC
[ENA]
¡û
>PHG14300368
KC748968
Myoviridae
Mycobacterium phage Gizmo Gb1 (KC748968)
95886
95959
+
Val
CAC
[ENA]
¡û
>PHG14300373
KC748970
Myoviridae
Mycobacterium phage ArcherS7 Gb1 (KC748970)
94223
94296
+
Val
CAC
[ENA]
¡û
>PHG14300411
KF006817
Myoviridae
Mycobacterium phage Breeniome phi47:1 (KF006817)
93236
93309
+
Val
CAC
[ENA]
¡û
>PHG14300421
KF024734
Myoviridae
Mycobacterium phage Shrimp phi47:1 (KF024734)
94956
95029
+
Val
CAC
[ENA]
¡û
>PHG14300486
KJ595575
Myoviridae
Mycobacterium phage Willis LMSP-25 (KJ595575)
94188
94261
+
Val
CAC
[ENA]
¡û
>PHG14300525
KM881426
Myoviridae
Mycobacterium phage ZygoTaiga pEcSw (KM881426)
95208
95281
+
Val
CAC
[ENA]
¡û
Identical group No.757408 (1 seq.)
>PHG0600015
AY266303
Myoviridae
Aeromonas virus Aeh1 PaP3 (AY266303)
96505
96387
-
Val
CAC
[ENA]
¡û
Identical group No.802045 (1 seq.)
>PHG181005991
MF668280
Myoviridae
Mycobacterium phage Phabba (MF668280)
92353
92424
+
Val
CAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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