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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Myoviridae
Anticodon = CAG
HIT:
8 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.160108 (3 seq.)
>PHG181003619
KX831080
Myoviridae
Mycobacterium phage Lukilu (KX831080)
30645
30730
+
Leu
CAG
[ENA]
¡û
>PHG181006210
MF919495
Myoviridae
Mycobacterium phage Bigswole (MF919495)
34159
34244
+
Leu
CAG
[ENA]
¡û
>PHG181007340
MG812494
Myoviridae
Mycobacterium phage Pier (MG812494)
31908
31993
+
Leu
CAG
[ENA]
¡û
Identical group No.164177 (1 seq.)
>PHG181005978
MF668280
Myoviridae
Mycobacterium phage Phabba (MF668280)
32069
32152
+
Leu
CAG
[ENA]
¡û
Identical group No.235269 (29 seq.)
>PHG0100206
AY129337
Myoviridae
Mycobacterium phage Bxz1 PaP3 (AY129337)
33043
33119
+
Leu
CAG
[ENA]
¡û
>PHG0100439
DQ398053
Myoviridae
Mycobacterium phage Catera Brazil-1 (DQ398053)
30188
30264
+
Leu
CAG
[ENA]
¡û
>PHG0100525
EU826467
Myoviridae
Mycobacterium phage Rizal N4 (EU826467)
30649
30725
+
Leu
CAG
[ENA]
¡û
>PHG0100544
EU826468
Myoviridae
Mycobacterium phage Spud N4 (EU826468)
32047
32123
+
Leu
CAG
[ENA]
¡û
>PHG0100564
EU826469
Myoviridae
Mycobacterium phage ScottMcG N4 (EU826469)
31072
31148
+
Leu
CAG
[ENA]
¡û
>PHG181001463
KT281790
Myoviridae
Mycobacterium phage HyRo (KT281790)
30300
30376
+
Leu
CAG
[ENA]
¡û
>PHG181001533
KT321476
Myoviridae
Mycobacterium phage Zeenon (KT321476)
31719
31795
+
Leu
CAG
[ENA]
¡û
>PHG181001633
KT365400
Myoviridae
Mycobacterium phage ErnieJ (KT365400)
30128
30204
+
Leu
CAG
[ENA]
¡û
>PHG181003495
KX721255
Myoviridae
Mycobacterium phage Yucca (KX721255)
31654
31730
+
Leu
CAG
[ENA]
¡û
>PHG181003518
KX721256
Myoviridae
Mycobacterium phage Erdmann (KX721256)
31732
31808
+
Leu
CAG
[ENA]
¡û
>PHG181006234
MF919499
Myoviridae
Mycobacterium phage Daffodil (MF919499)
31731
31807
+
Leu
CAG
[ENA]
¡û
>PHG181006289
MF919527
Myoviridae
Mycobacterium phage Phox (MF919527)
31622
31698
+
Leu
CAG
[ENA]
¡û
>PHG181007318
MG812493
Myoviridae
Mycobacterium phage NuevoMundo (MG812493)
33693
33769
+
Leu
CAG
[ENA]
¡û
>PHG181007672
MH051266
Myoviridae
Mycobacterium phage MikeLiesIn (MH051266)
31745
31821
+
Leu
CAG
[ENA]
¡û
>PHG181007976
MH316567
Myoviridae
Mycobacterium phage ParkTD (MH316567)
31728
31804
+
Leu
CAG
[ENA]
¡û
>PHG14101062
JN204348
Myoviridae
Mycobacterium phage Sebata (JN204348)
32218
32294
+
Leu
CAG
[ENA]
¡û
>PHG14101134
JN412588
Myoviridae
Mycobacterium phage Dandelion (JN412588)
34403
34479
+
Leu
CAG
[ENA]
¡û
>PHG14101155
JN412592
Myoviridae
Mycobacterium phage LinStu Patience (JN412592)
32099
32175
+
Leu
CAG
[ENA]
¡û
>PHG14101184
JN624850
Myoviridae
Mycobacterium phage Pleione (JN624850)
31731
31807
+
Leu
CAG
[ENA]
¡û
>PHG14101232
JN699013
Myoviridae
Mycobacterium phage Pio ThreeOh3D2 (JN699013)
32661
32737
+
Leu
CAG
[ENA]
¡û
>PHG14101255
JN699625
Myoviridae
Mycobacterium phage Wally ThreeOh3D2 (JN699625)
30287
30363
+
Leu
CAG
[ENA]
¡û
>PHG14101275
JN699626
Myoviridae
Mycobacterium phage MoMoMixon (JN699626)
31845
31921
+
Leu
CAG
[ENA]
¡û
>PHG14101296
JN699627
Myoviridae
Mycobacterium phage Nappy (JN699627)
32034
32110
+
Leu
CAG
[ENA]
¡û
>PHG14101591
JQ911768
Myoviridae
Mycobacterium phage Ava3 Lu11 (JQ911768)
31791
31867
+
Leu
CAG
[ENA]
¡û
>PHG14102206
KC691257
Myoviridae
Mycobacterium phage Astraea Gb1 (KC691257)
30919
30995
+
Leu
CAG
[ENA]
¡û
>PHG14102227
KC748968
Myoviridae
Mycobacterium phage Gizmo Gb1 (KC748968)
31415
31491
+
Leu
CAG
[ENA]
¡û
>PHG14102477
KF024734
Myoviridae
Mycobacterium phage Shrimp phi47:1 (KF024734)
31736
31812
+
Leu
CAG
[ENA]
¡û
>PHG14102981
KJ595575
Myoviridae
Mycobacterium phage Willis LMSP-25 (KJ595575)
31627
31703
+
Leu
CAG
[ENA]
¡û
>PHG14103343
KM881426
Myoviridae
Mycobacterium phage ZygoTaiga pEcSw (KM881426)
31733
31809
+
Leu
CAG
[ENA]
¡û
Identical group No.244056 (18 seq.)
>PHG0100584
EU826471
Myoviridae
Mycobacterium phage Cali N4 (EU826471)
31566
31641
+
Leu
CAG
[ENA]
¡û
>PHG181001219
KR080196
Myoviridae
Mycobacterium phage Momo (KR080196)
30738
30813
+
Leu
CAG
[ENA]
¡û
>PHG181001609
KT365398
Myoviridae
Mycobacterium phage DTDevon (KT365398)
31902
31977
+
Leu
CAG
[ENA]
¡û
>PHG181003177
KX369583
Myoviridae
Mycobacterium phage Littleton (KX369583)
30696
30771
+
Leu
CAG
[ENA]
¡û
>PHG181003542
KX752698
Myoviridae
Mycobacterium phage Tonenili (KX752698)
36151
36226
+
Leu
CAG
[ENA]
¡û
>PHG181003580
KX781992
Myoviridae
Mycobacterium phage Gabriel (KX781992)
30971
31046
+
Leu
CAG
[ENA]
¡û
>PHG181006165
MF919493
Myoviridae
Mycobacterium phage Audrick (MF919493)
30717
30792
+
Leu
CAG
[ENA]
¡û
>PHG181006187
MF919494
Myoviridae
Mycobacterium phage BeanWater (MF919494)
30329
30404
+
Leu
CAG
[ENA]
¡û
>PHG181006260
MF919513
Myoviridae
Mycobacterium phage Koguma (MF919513)
29217
29292
+
Leu
CAG
[ENA]
¡û
>PHG181007367
MG872839
Myoviridae
Mycobacterium phage LifeSavor (MG872839)
30458
30533
+
Leu
CAG
[ENA]
¡û
>PHG181007648
MH051261
Myoviridae
Mycobacterium phage Tyke (MH051261)
32498
32573
+
Leu
CAG
[ENA]
¡û
>PHG181007949
MH316561
Myoviridae
Mycobacterium phage Derek (MH316561)
31027
31102
+
Leu
CAG
[ENA]
¡û
>PHG14100193
GQ303260
Myoviridae
Mycobacterium phage ET08 ATCC 35860-B1 (GQ303260)
29432
29507
+
Leu
CAG
[ENA]
¡û
>PHG14100216
GQ303262
Myoviridae
Mycobacterium phage LRRHood ATCC 35860-B1 (GQ303262)
31036
31111
+
Leu
CAG
[ENA]
¡û
>PHG14100879
JF704096
Myoviridae
Mycobacterium phage Ghost MB56Spyo045 (JF704096)
30738
30813
+
Leu
CAG
[ENA]
¡û
>PHG14100926
JF704116
Myoviridae
Mycobacterium phage Drazdys (JF704116)
31533
31608
+
Leu
CAG
[ENA]
¡û
>PHG14102250
KC748970
Myoviridae
Mycobacterium phage ArcherS7 Gb1 (KC748970)
31059
31134
+
Leu
CAG
[ENA]
¡û
>PHG14102435
KF006817
Myoviridae
Mycobacterium phage Breeniome phi47:1 (KF006817)
30562
30637
+
Leu
CAG
[ENA]
¡û
Identical group No.254881 (1 seq.)
>PHG0100504
EU826466
Myoviridae
Mycobacterium phage Myrna N4 (EU826466)
32662
32737
+
Leu
CAG
[ENA]
¡û
Identical group No.360772 (1 seq.)
>PHG14200056
JF704092
Myoviridae
Mycobacterium phage Alice MB56Spyo045 (JF704092)
29494
29568
+
Leu
CAG
[ENA]
¡û
Identical group No.414281 (1 seq.)
>PHG181002149
KU682439
Myoviridae
Stenotrophomonas phage vB_SmaS-DLP_6 (KU682439)
113330
113406
+
Leu
CAG
[ENA]
¡û
Identical group No.428294 (1 seq.)
>PHG182000071
MH051260
Myoviridae
Mycobacterium phage InterFolia (MH051260)
34142
34216
+
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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