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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Spirochaetota
Anticodon = CGC
HIT:
51 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.342693 (1 seq.)
>C11119680
CP002868
Spirochaetota
Gracilinema caldarium DSM 7334 [CP002868]
3150329
3150402
+
Ala
CGC
[Ensembl]
¡û
Identical group No.359813 (5 seq.)
>WENV183707814
PDWI01010800
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
2488
2414
-
Ala
CGC
[ENA]
¡û
>WENV183711282
PDWI01065132
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
2784
2711
-
Ala
CGC
[ENA]
¡û
>WENV183722320
PDWJ01119671
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
2252
2179
-
Ala
CGC
[ENA]
¡û
>W2011952152
UWYT01000291
Spirochaetota
Olavius algarvensis spirochete endosymbiont [UWYT]
21369
21442
+
Ala
CGC
[ENA]
¡û
>W1511336911
JRAS01000217
Spirochaetota
Alkalispirochaeta odontotermitis JC202 [JRAS]
12647
12720
+
Ala
CGC
[ENA]
¡û
Identical group No.384489 (4 seq.)
>W131168519
AREC01000005
Spirochaetota
Alkalispirochaeta alkalica DSM 8900 [AREC]
160115
160042
-
Ala
CGC
[ENA]
¡û
>W1910636846
LPWH01000002
Spirochaetota
Alkalispirochaeta sphaeroplastigenens JC133 [LPWH]
75641
75714
+
Ala
CGC
[ENA]
¡û
>W2010784183
LPWH01000002
Spirochaetota
Alkalispirochaeta sphaeroplastigenens JC133 [LPWH]
75641
75714
+
Ala
CGC
[ENA]
¡û
>W1710596619
FTMS01000001
Spirochaetota
Alkalispirochaeta americana [FTMS]
158692
158619
-
Ala
CGC
[ENA]
¡û
Identical group No.402262 (1 seq.)
>W1711422276
MIAV01000006
Spirochaetota
Spirochaetes bacterium GWC2_52_13 [MIAV]
41553
41626
+
Ala
CGC
[ENA]
¡û
Identical group No.407621 (3 seq.)
>C10112756
CP001698
Spirochaetota
Spirochaeta thermophila DSM 6192 [CP001698]
674774
674850
+
Ala
CGC
[Ensembl]
¡û
>C11122022
CP002903
Spirochaetota
Spirochaeta thermophila DSM 6578 [CP002903]
704236
704160
-
Ala
CGC
[Ensembl]
¡û
>W11141840
AEOG01000017
Spirochaetota
Spirochaeta thermophila DSM 6578 [AEOG]
615
691
+
Ala
CGC
[ENA]
¡û
Identical group No.447239 (2 seq.)
>W1711137233
LVBD01000035
Spirochaetota
Spirochaetales bacterium Spiro_02 [LVBD]
73572
73645
+
Ala
CGC
[ENA]
¡û
>W1610948353
LVBD01000035
Spirochaetota
Spirochaetales bacterium Spiro_02 [LVBD]
73572
73645
+
Ala
CGC
[ENA]
¡û
Identical group No.449196 (2 seq.)
>C10112590
CP002116
Spirochaetota
Sediminispirochaeta smaragdinae DSM 11293 [CP002116]
4414564
4414637
+
Ala
CGC
[Ensembl]
¡û
>W1710652130
JWTM01000101
Spirochaetota
Candidatus Marispirochaeta associata [JWTM]
430611
430538
-
Ala
CGC
[ENA]
¡û
Identical group No.450375 (1 seq.)
>C211235895
CP067089
Spirochaetota
Breznakiella homolactica RmG30 [CP067089]
1460332
1460405
+
Ala
CGC
-
¡û
Identical group No.483381 (1 seq.)
>W1711796900
MWQY01000001
Spirochaetota
Marispirochaeta aestuarii sp. JC444 [MWQY]
280938
280865
-
Ala
CGC
[ENA]
¡û
Identical group No.487947 (1 seq.)
>W131176133
ARJU01000071
Spirochaetota
Sediminispirochaeta bajacaliforniensis DSM 16054 [ARJU]
96243
96316
+
Ala
CGC
[ENA]
¡û
Identical group No.510821 (31 seq.)
>W131205814
ATFC01000009
Spirochaetota
Treponema vincentii F0403 [ATFC]
189367
189293
-
Ala
CGC
[ENA]
¡û
>W131205884
ATFE01000005
Spirochaetota
Treponema medium ATCC 700293 [ATFE]
144391
144466
+
Ala
CGC
[ENA]
¡û
>WENV180014730
FQKF010117511
[FQKF] soil metagenome; Soil
3195
3268
+
Ala
CGC
[ENA]
¡û
>WENV180727476
ODGU01006028
[ODGU] human metagenome; G_DNA_Supragingival plaque
717
791
+
Ala
CGC
[ENA]
¡û
>WENV180729024
ODGU01159544
[ODGU] human metagenome; G_DNA_Supragingival plaque
137
211
+
Ala
CGC
[ENA]
¡û
>WENV180787868
ODIS01019250
[ODIS] human metagenome; G_DNA_Supragingival plaque
249
177
-
Ala
CGC
[ENA]
¡û
>WENV180788091
ODIS01030000
[ODIS] human metagenome; G_DNA_Supragingival plaque
1197
1271
+
Ala
CGC
[ENA]
¡û
>WENV180796392
ODJB01004228
[ODJB] human metagenome; G_DNA_Supragingival plaque
762
836
+
Ala
CGC
[ENA]
¡û
>WENV180823765
ODJW01155957
[ODJW] human metagenome; G_DNA_Supragingival plaque
47
121
+
Ala
CGC
[ENA]
¡û
>WENV180846722
ODKT01020775
[ODKT] human metagenome; G_DNA_Supragingival plaque
151
225
+
Ala
CGC
[ENA]
¡û
>WENV181009095
ODWE01029279
[ODWE] human metagenome; G_DNA_Supragingival plaque
1292
1218
-
Ala
CGC
[ENA]
¡û
>WENV181064873
ODYP01137045
[ODYP] human metagenome; G_DNA_Supragingival plaque
103
177
+
Ala
CGC
[ENA]
¡û
>WENV181068253
ODZI01209312
[ODZI] human metagenome; G_DNA_Supragingival plaque
167
241
+
Ala
CGC
[ENA]
¡û
>WENV181078451
OEAS01000073
[OEAS] human metagenome; G_DNA_Supragingival plaque
10454
10528
+
Ala
CGC
[ENA]
¡û
>WENV181079087
OEAS01001856
[OEAS] human metagenome; G_DNA_Supragingival plaque
11842
11768
-
Ala
CGC
[ENA]
¡û
>WENV181079941
OEAS01020132
[OEAS] human metagenome; G_DNA_Supragingival plaque
2086
2012
-
Ala
CGC
[ENA]
¡û
>WENV181080189
OEAS01031895
[OEAS] human metagenome; G_DNA_Supragingival plaque
1865
1791
-
Ala
CGC
[ENA]
¡û
>WENV181152548
OEIA01002332
[OEIA] human metagenome; G_DNA_Supragingival plaque
2153
2227
+
Ala
CGC
[ENA]
¡û
>WENV181161069
OEIK01117044
[OEIK] human metagenome; G_DNA_Supragingival plaque
182
256
+
Ala
CGC
[ENA]
¡û
>W1911630861
PTQW01000008
Spirochaetota
Treponema sp. J25 [PTQW]
16758
16831
+
Ala
CGC
[ENA]
¡û
>C151045980
CP009227
Spirochaetota
Treponema sp. OMZ 838 [CP009227]
1282485
1282559
+
Ala
CGC
[Ensembl]
¡û
>W2011221740
PTQW01000008
Spirochaetota
Treponema sp. J25 [PTQW]
16758
16831
+
Ala
CGC
[ENA]
¡û
>C211038689
CP031393
Spirochaetota
Treponema medium ATCC 700293 [CP031393]
1009988
1010061
+
Ala
CGC
-
¡û
>W10106157
ACYH01000027
Spirochaetota
Treponema vincentii ATCC 35580 [ACYH]
164264
164190
-
Ala
CGC
[ENA]
¡û
>C231061740
CP051147
Spirochaetota
Treponema sp. OMZ 857 [CP051147]
204719
204793
+
Ala
CGC
-
¡û
>C231061834
CP051148
Spirochaetota
Treponema vincentii OMZ 861 [CP051148]
309951
309877
-
Ala
CGC
-
¡û
>C231061883
CP051153
Spirochaetota
Treponema vincentii OMZ 862 [CP051153]
347307
347233
-
Ala
CGC
-
¡û
>C231061961
CP051194
Spirochaetota
Treponema sp. OMZ 855 [CP051194]
2418299
2418225
-
Ala
CGC
-
¡û
>C231062133
CP051197
Spirochaetota
Treponema vincentii OMZ 802 [CP051197]
321946
321872
-
Ala
CGC
-
¡û
>C231194514
CP084606
Spirochaetota
Brucepastera parasyntrophica RmG11 [CP084606]
2045308
2045236
-
Ala
CGC
-
¡û
>W11108480
ACYH01000027
Spirochaetota
Treponema vincentii ATCC 35580 [ACYH]
164264
164190
-
Ala
CGC
[ENA]
¡û
Identical group No.521895 (5 seq.)
>W1910067272
BEXT01000001
Thermodesulfobacteriota
Desulfonema ishimotonii Tokyo 01 [BEXT]
1283754
1283829
+
Ala
CGC
[ENA]
¡û
>W2010079499
BEXT01000001
Thermodesulfobacteriota
Desulfonema ishimotonii Tokyo 01 [BEXT]
1283754
1283829
+
Ala
CGC
[ENA]
¡û
>W2010326113
CACVKV010001544
Deltaproteobacteria
Olavius algarvensis Delta 1 endosymbiont [CACVKV]
7223
7150
-
Ala
CGC
[ENA]
¡û
>W1511336904
JRAS01000152
Spirochaetota
Alkalispirochaeta odontotermitis JC202 [JRAS]
7187
7114
-
Ala
CGC
[ENA]
¡û
>WENV079168
AASZ01002376
Olavius algarvensis microbiome from Mediterranean sea
7941
7864
-
Ala
CGC
[ENA]
Identical group No.524258 (46 seq.)
>C025750
AE000520
Spirochaetota
Treponema pallidum subsp. pallidum str. Nichols [AE000520]
1002824
1002896
+
Ala
CGC
[Ensembl]
¡û
>C191179249
CP040555
Spirochaetota
Treponema pallidum subsp. pallidum X-4 [CP040555]
1004636
1004709
+
Ala
CGC
-
¡û
>C151004498
CP003679
Spirochaetota
Treponema pallidum subsp. pallidum str. Sea 81-4 [CP003679]
1004009
1004082
+
Ala
CGC
[Ensembl]
¡û
>W2010369521
CAFBSC010000040
Spirochaetota
Treponema pallidum subsp. pertenue R7-PUT1-002 [CAFBSC]
721
648
-
Ala
CGC
[ENA]
¡û
>W2010369536
CAFBSD010000003
Spirochaetota
Treponema pallidum subsp. pertenue R8-KOS-007 [CAFBSD]
1363
1290
-
Ala
CGC
[ENA]
¡û
>W2010369613
CAFBSE010000070
Spirochaetota
Treponema pallidum subsp. pertenue R2-64919 [CAFBSE]
1024
951
-
Ala
CGC
[ENA]
¡û
>W2010369660
CAGKKW010000010
Spirochaetota
Treponema pallidum subsp. pertenue R3-SAL-007 [CAGKKW]
8170
8097
-
Ala
CGC
[ENA]
¡û
>W2010369719
CAGKKX010000263
Spirochaetota
Treponema pallidum subsp. pertenue R2-106190 [CAGKKX]
816
889
+
Ala
CGC
[ENA]
¡û
>W2010369741
CAGKKY010000038
Spirochaetota
Treponema pallidum subsp. pertenue R7-KUN2-001 [CAGKKY]
6808
6881
+
Ala
CGC
[ENA]
¡û
>W2011168244
OMHU01000098
Spirochaetota
Treponema pallidum A12 [OMHU]
4800
4873
+
Ala
CGC
[ENA]
¡û
>W2011168288
OMHW01000016
Spirochaetota
Treponema pallidum BNK07 [OMHW]
28034
28107
+
Ala
CGC
[ENA]
¡û
>W2011168332
OMHZ01000199
Spirochaetota
Treponema pallidum SNK05 [OMHZ]
7613
7686
+
Ala
CGC
[ENA]
¡û
>W2011169320
OMPM01000006
Spirochaetota
Treponema pallidum A10 [OMPM]
28028
28101
+
Ala
CGC
[ENA]
¡û
>C231360404
CP095415
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL8 [CP095415]
1004346
1004419
+
Ala
CGC
-
¡û
>C231360448
CP095416
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL5 [CP095416]
1004389
1004462
+
Ala
CGC
-
¡û
>C231360492
CP095417
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL4 [CP095417]
1004454
1004527
+
Ala
CGC
-
¡û
>C231360536
CP095418
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL3 [CP095418]
1004472
1004545
+
Ala
CGC
-
¡û
>C231360580
CP095419
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL2 [CP095419]
1004343
1004416
+
Ala
CGC
-
¡û
>C231360624
CP095420
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL1 [CP095420]
1003305
1003378
+
Ala
CGC
-
¡û
>C241187279
CP094202
Spirochaetota
Treponema pallidum subsp. pertenue 6RUM2090716 [CP094202]
1005450
1005523
+
Ala
CGC
-
¡û
>C241187324
CP094268
Spirochaetota
Treponema pallidum subsp. pertenue 19LMF8280815 [CP094268]
1005032
1005105
+
Ala
CGC
-
¡û
>C241187976
CP094485
Spirochaetota
Treponema pallidum subsp. pertenue 22LMF5290815 [CP094485]
1005822
1005895
+
Ala
CGC
-
¡û
>C241188021
CP094486
Spirochaetota
Treponema pallidum subsp. pertenue 24SNM5151115 [CP094486]
1005598
1005671
+
Ala
CGC
-
¡û
>C241192404
CP097901
Spirochaetota
Treponema paraluiscuniculi L2 [CP097901]
997241
997314
+
Ala
CGC
-
¡û
>C10113599
CP001752
Spirochaetota
Treponema pallidum subsp. pallidum str. Chicago [CP001752]
1004086
1004159
+
Ala
CGC
[Ensembl]
¡û
>C10113643
CP000805
Spirochaetota
Treponema pallidum subsp. pallidum SS14 [CP000805]
1004269
1004342
+
Ala
CGC
[Ensembl]
¡û
>C11122909
CP002103
Spirochaetota
Treponema paraluiscuniculi Cuniculi A [CP002103]
998136
998209
+
Ala
CGC
[Ensembl]
¡û
>C121002417
CP002374
Spirochaetota
Treponema pallidum subsp. pertenue str. SamoaD [CP002374]
1004519
1004592
+
Ala
CGC
[Ensembl]
¡û
>C121002462
CP002375
Spirochaetota
Treponema pallidum subsp. pertenue str. CDC2 [CP002375]
1004916
1004989
+
Ala
CGC
[Ensembl]
¡û
>C121002507
CP002376
Spirochaetota
Treponema pallidum subsp. pertenue str. Gauthier [CP002376]
1004585
1004658
+
Ala
CGC
[Ensembl]
¡û
>C121006112
CP003115
Spirochaetota
Treponema pallidum subsp. pallidum DAL-1 [CP003115]
1004777
1004850
+
Ala
CGC
[Ensembl]
¡û
>C161017270
CP007548
Spirochaetota
Treponema pallidum subsp. endemicum str. Bosnia A [CP007548]
1002448
1002521
+
Ala
CGC
[Ensembl]
¡û
>C161028035
CP010558
Spirochaetota
Treponema pallidum subsp. pallidum Chicago Population [CP010558]
1004271
1004344
+
Ala
CGC
-
¡û
>C161028079
CP010559
Spirochaetota
Treponema pallidum subsp. pallidum CDC-A [CP010559]
1004527
1004600
+
Ala
CGC
-
¡û
>C161028123
CP010560
Spirochaetota
Treponema pallidum subsp. pallidum Nichols Houston [CP010560]
1003279
1003352
+
Ala
CGC
-
¡û
>C161028167
CP010561
Spirochaetota
Treponema pallidum subsp. pallidum Nichols Houston [CP010561]
1004446
1004519
+
Ala
CGC
-
¡û
>C161028211
CP010562
Spirochaetota
Treponema pallidum subsp. pallidum UW074B [CP010562]
1004392
1004465
+
Ala
CGC
-
¡û
>C161028255
CP010563
Spirochaetota
Treponema pallidum subsp. pallidum UW189B [CP010563]
1004626
1004699
+
Ala
CGC
-
¡û
>C161028300
CP010564
Spirochaetota
Treponema pallidum subsp. pallidum UW228B [CP010564]
1004856
1004929
+
Ala
CGC
-
¡û
>C161028344
CP010565
Spirochaetota
Treponema pallidum subsp. pallidum UW254B [CP010565]
1004662
1004735
+
Ala
CGC
-
¡û
>C161028388
CP010566
Spirochaetota
Treponema pallidum subsp. pallidum UW391B [CP010566]
1004598
1004671
+
Ala
CGC
-
¡û
>C161084193
CP015162
Spirochaetota
Treponema pallidum subsp. pallidum Amoy [CP015162]
867993
868066
+
Ala
CGC
-
¡û
>C131001874
CP003064
Spirochaetota
Treponema pallidum subsp. pallidum str. Mexico A [CP003064]
1004835
1004908
+
Ala
CGC
[Ensembl]
¡û
>C131009505
CP003902
Spirochaetota
Treponema pallidum str. Fribourg-Blanc [CP003902]
1005651
1005724
+
Ala
CGC
[Ensembl]
¡û
>C131011366
CP004010
Spirochaetota
Treponema pallidum subsp. pallidum str. Nichols [CP004010]
1004439
1004512
+
Ala
CGC
-
¡û
>C131011410
CP004011
Spirochaetota
Treponema pallidum subsp. pallidum SS14 [CP004011]
1004375
1004448
+
Ala
CGC
-
¡û
Identical group No.526660 (2 seq.)
>W1710790793
LJNB01000012
Spirochaetota
Spirochaetes bacterium DG_61 [LJNB]
1913
1840
-
Ala
CGC
[ENA]
¡û
>W1610654718
LJNB01000012
Spirochaetota
Spirochaetes bacterium DG_61 [LJNB]
1913
1840
-
Ala
CGC
[ENA]
¡û
Identical group No.531186 (10 seq.)
>W1711137332
LVBG01000039
Spirochaetota
Spirochaetales bacterium Spiro_05 [LVBG]
15821
15895
+
Ala
CGC
[ENA]
¡û
>WENV180345637
OBLN01001349
[OBLN] sediment metagenome; sediment
7010
6938
-
Ala
CGC
[ENA]
¡û
>WENV170112708
CEGF01019115
[CEGF] microbial mat metagenome; grass silage
18
93
+
Ala
CGC
[ENA]
¡û
>WENV170635303
JDSF01001100
[JDSF] bioreactor metagenome; continuous culture bioreactor denitrification-DNRA
398
473
+
Ala
CGC
[ENA]
¡û
>WENV170635726
JDSH01000326
[JDSH] bioreactor metagenome; continuous culture bioreactor electron acceptor NO2- transfer2; day 38 after inoculation
9626
9551
-
Ala
CGC
[ENA]
¡û
>WENV170691349
LFRM01393716
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
646
720
+
Ala
CGC
[ENA]
¡û
>W1810893547
QUWK01000001
Spirochaetota
Sphaerochaeta halotolerans 4-11 [QUWK]
217756
217684
-
Ala
CGC
[ENA]
¡û
>W2012444341
WUJG01000009
Spirochaetota
Sphaerochaeta halotolerans 585 [WUJG]
66492
66564
+
Ala
CGC
[ENA]
¡û
>W2110424628
JAEKNT010000460
Spirochaetota
Sphaerochaeta sp. S2 [JAEKNT]
12131
12203
+
Ala
CGC
[ENA]
¡û
>W1610948452
LVBG01000039
Spirochaetota
Spirochaetales bacterium Spiro_05 [LVBG]
15821
15895
+
Ala
CGC
[ENA]
¡û
Identical group No.534048 (2 seq.)
>W1711137375
LVBI01000014
Spirochaetota
Spirochaetales bacterium Spiro_07 [LVBI]
95690
95764
+
Ala
CGC
[ENA]
¡û
>W1610948495
LVBI01000014
Spirochaetota
Spirochaetales bacterium Spiro_07 [LVBI]
95690
95764
+
Ala
CGC
[ENA]
¡û
Identical group No.534067 (10 seq.)
>W1711137538
LVBN01000070
Spirochaetota
Spirochaetales bacterium Spiro_12 [LVBN]
73
1
-
Ala
CGC
[ENA]
¡û
>W1711629297
MPOU01000014
Unclassified
bacterium EBM-40 [MPOU]
24397
24325
-
Ala
CGC
[ENA]
¡û
>WENV181230220
OFEK01000436
[OFEK] activated sludge metagenome; Anaerobic digester
22975
23047
+
Ala
CGC
[ENA]
¡û
>WENV181311268
OFJB01000525
[OFJB] sludge metagenome; sludge
11066
11139
+
Ala
CGC
[ENA]
¡û
>WENV181311276
OFJB01000538
[OFJB] sludge metagenome; sludge
3721
3648
-
Ala
CGC
[ENA]
¡û
>WENV181312097
OFJB01041587
[OFJB] sludge metagenome; sludge
147
220
+
Ala
CGC
[ENA]
¡û
>WENV170641258
JFJP01036020
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
92
18
-
Ala
CGC
[ENA]
¡û
>W141812379
JQDQ01000088
Thermodesulfobacteriota
Smithella sp. SCADC [JQDQ]
22641
22569
-
Ala
CGC
[ENA]
¡û
>W2012317483
WESA01000001
Spirochaetota
Rectinema sp. SURF-ANA-1 [WESA]
142058
142130
+
Ala
CGC
[ENA]
¡û
>W1610948658
LVBN01000070
Spirochaetota
Spirochaetales bacterium Spiro_12 [LVBN]
73
1
-
Ala
CGC
[ENA]
¡û
Identical group No.536215 (3 seq.)
>W1711524535
MLPZ01000002
Spirochaetota
Treponema sp. CETP13 [MLPZ]
86166
86094
-
Ala
CGC
[ENA]
¡û
>WENV170655011
JTFN01001742
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
7689
7617
-
Ala
CGC
[ENA]
¡û
>WENV170656320
JTFO01009904
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
1496
1568
+
Ala
CGC
[ENA]
¡û
Identical group No.536624 (4 seq.)
>W1711422135
MIAQ01000358
Spirochaetota
Spirochaetes bacterium GWB1_59_5 [MIAQ]
10802
10727
-
Ala
CGC
[ENA]
¡û
>W2310011525
BNUR01000078
Spirochaetota
Spirochaetia bacterium MS495-2 [BNUR]
8386
8458
+
Ala
CGC
[ENA]
¡û
>C11122953
CP001843
Spirochaetota
Treponema primitia ZAS-2 [CP001843]
784157
784229
+
Ala
CGC
[Ensembl]
¡û
>W11134603
AEEA01000042
Spirochaetota
Treponema primitia ZAS-1 [AEEA]
52924
52998
+
Ala
CGC
[ENA]
¡û
Identical group No.536626 (5 seq.)
>W1711422145
MIAR01000010
Spirochaetota
Spirochaetes bacterium GWB1_60_80 [MIAR]
27543
27617
+
Ala
CGC
[ENA]
¡û
>W1711422242
MIAU01000046
Spirochaetota
Spirochaetes bacterium GWC1_61_12 [MIAU]
7098
7172
+
Ala
CGC
[ENA]
¡û
>W1711422358
MIAX01000080
Spirochaetota
Spirochaetes bacterium GWD1_61_31 [MIAX]
21673
21599
-
Ala
CGC
[ENA]
¡û
>W1711422439
MIAZ01000049
Spirochaetota
Spirochaetes bacterium GWE1_60_18 [MIAZ]
27539
27613
+
Ala
CGC
[ENA]
¡û
>W1711422637
MIBF01000049
Spirochaetota
Spirochaetes bacterium GWF1_60_12 [MIBF]
27497
27571
+
Ala
CGC
[ENA]
¡û
Identical group No.536648 (1 seq.)
>W1711422533
MIBC01000318
Spirochaetota
Spirochaetes bacterium GWF1_41_5 [MIBC]
1048
1122
+
Ala
CGC
[ENA]
¡û
Identical group No.536685 (2 seq.)
>W1711422670
MIBH01000008
Spirochaetota
Spirochaetes bacterium RBG_13_51_14 [MIBH]
84
11
-
Ala
CGC
[ENA]
¡û
>W1711422757
MIBJ01000061
Spirochaetota
Spirochaetes bacterium RBG_16_49_21 [MIBJ]
54049
54122
+
Ala
CGC
[ENA]
¡û
Identical group No.536708 (5 seq.)
>W1711422847
MIBM01000325
Spirochaetota
Spirochaetes bacterium RIFOXYC1_FULL_54_7 [MIBM]
5107
5179
+
Ala
CGC
[ENA]
¡û
>W1711423819
MIDK01000152
Spirochaetota
Treponema sp. GWA1_62_8 [MIDK]
11920
11848
-
Ala
CGC
[ENA]
¡û
>W1711423852
MIDL01000053
Spirochaetota
Treponema sp. GWB1_62_6 [MIDL]
19944
20016
+
Ala
CGC
[ENA]
¡û
>W1711423900
MIDM01000079
Spirochaetota
Treponema sp. GWC1_61_84 [MIDM]
11936
12008
+
Ala
CGC
[ENA]
¡û
>W1711423953
MIDN01000200
Spirochaetota
Treponema sp. RIFOXYC1_FULL_61_9 [MIDN]
574
502
-
Ala
CGC
[ENA]
¡û
Identical group No.536965 (7 seq.)
>W1711629531
MPPB01000149
Spirochaetota
Spirochaeta sp. EBM-43 [MPPB]
37341
37415
+
Ala
CGC
[ENA]
¡û
>WENV170007390
AMWB02115885
[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
553
627
+
Ala
CGC
[ENA]
¡û
>WENV170717994
LSQX01057702
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
152
80
-
Ala
CGC
[ENA]
¡û
>W1910496460
FXUH01000005
Spirochaetota
Sphaerochaeta dissipatitropha GLS2 [FXUH]
161704
161632
-
Ala
CGC
[ENA]
¡û
>W2010416214
FXUH01000005
Spirochaetota
Sphaerochaeta dissipatitropha GLS2 [FXUH]
161704
161632
-
Ala
CGC
[ENA]
¡û
>C231353571
CP094929
Spirochaetota
Sphaerochaeta associata GLS2T [CP094929]
123075
123003
-
Ala
CGC
-
¡û
>C11121340
CP002541
Spirochaetota
Sphaerochaeta globosa str. Buddy [CP002541]
124304
124232
-
Ala
CGC
[Ensembl]
¡û
Identical group No.539167 (45 seq.)
>W131000350
AGEB01000003
Spirochaetota
Treponema denticola US-Trep [AGEB]
304125
304199
+
Ala
CGC
[ENA]
¡û
>W131003067
AHAB01000010
Spirochaetota
Treponema denticola SP23 [AHAB]
27494
27568
+
Ala
CGC
[ENA]
¡û
>W131003086
AHAC01000010
Spirochaetota
Treponema denticola SP32 [AHAC]
342308
342234
-
Ala
CGC
[ENA]
¡û
>W131003115
AHAD01000001
Spirochaetota
Treponema denticola SP44 [AHAD]
464608
464534
-
Ala
CGC
[ENA]
¡û
>C025466
AE017226
Spirochaetota
Treponema denticola ATCC 35405 [AE017226]
684725
684797
+
Ala
CGC
[Ensembl]
¡û
>W141005329
AGDQ01000004
Spirochaetota
Treponema denticola AL-2 [AGDQ]
236968
236894
-
Ala
CGC
[ENA]
¡û
>W141005382
AGDR01000030
Spirochaetota
Treponema denticola ASLM [AGDR]
71265
71339
+
Ala
CGC
[ENA]
¡û
>W141005440
AGDS01000023
Spirochaetota
Treponema denticola ATCC 33520 [AGDS]
122543
122469
-
Ala
CGC
[ENA]
¡û
>W141005483
AGDT01000022
Spirochaetota
Treponema denticola ATCC 33521 [AGDT]
75275
75201
-
Ala
CGC
[ENA]
¡û
>W141005522
AGDU01000029
Spirochaetota
Treponema denticola ATCC 35404 [AGDU]
6236
6310
+
Ala
CGC
[ENA]
¡û
>W141005565
AGDV01000020
Spirochaetota
Treponema denticola H-22 [AGDV]
210856
210930
+
Ala
CGC
[ENA]
¡û
>W141005571
AGDW01000001
Spirochaetota
Treponema denticola H1-T [AGDW]
153448
153374
-
Ala
CGC
[ENA]
¡û
>W141005654
AGDX01000019
Spirochaetota
Treponema denticola MYR-T [AGDX]
16601
16527
-
Ala
CGC
[ENA]
¡û
>W141005689
AGDY01000009
Spirochaetota
Treponema denticola OTK [AGDY]
193624
193699
+
Ala
CGC
[ENA]
¡û
>W141005705
AGDZ01000018
Spirochaetota
Treponema denticola SP33 [AGDZ]
493739
493813
+
Ala
CGC
[ENA]
¡û
>W141005764
AGEA01000013
Spirochaetota
Treponema denticola SP37 [AGEA]
154075
154149
+
Ala
CGC
[ENA]
¡û
>WENV180721758
ODGL01011731
[ODGL] human metagenome; G_DNA_Subgingival plaque
573
647
+
Ala
CGC
[ENA]
¡û
>WENV180727266
ODGU01003657
[ODGU] human metagenome; G_DNA_Supragingival plaque
1087
1013
-
Ala
CGC
[ENA]
¡û
>WENV180734228
ODGZ01003945
[ODGZ] human metagenome; G_DNA_Supragingival plaque
5433
5507
+
Ala
CGC
[ENA]
¡û
>WENV180789089
ODIS01224950
[ODIS] human metagenome; G_DNA_Supragingival plaque
141
67
-
Ala
CGC
[ENA]
¡û
>WENV180939305
ODTX01025708
[ODTX] human metagenome; G_DNA_Supragingival plaque
763
837
+
Ala
CGC
[ENA]
¡û
>WENV180951959
ODUH01084499
[ODUH] human metagenome; G_DNA_Subgingival plaque
281
207
-
Ala
CGC
[ENA]
¡û
>WENV180980310
ODVE01000032
[ODVE] human metagenome; G_DNA_Supragingival plaque
48467
48541
+
Ala
CGC
[ENA]
¡û
>WENV181079190
OEAS01002777
[OEAS] human metagenome; G_DNA_Supragingival plaque
1806
1732
-
Ala
CGC
[ENA]
¡û
>C151046057
CP009228
Spirochaetota
Treponema putidum OMZ 758 [CP009228]
543512
543438
-
Ala
CGC
[Ensembl]
¡û
>W2011812655
UFQP01000006
Spirochaetota
Treponema denticola Marseille-5-CSURP7640 [UFQP]
66025
66099
+
Ala
CGC
[ENA]
¡û
>W2012082407
VLLD01000003
Spirochaetota
Treponema putidum ATCC 700334 [VLLD]
183938
183864
-
Ala
CGC
[ENA]
¡û
>C231045226
CP038800
Spirochaetota
Treponema denticola ATCC 700768 [CP038800]
623874
623948
+
Ala
CGC
-
¡û
>C231045293
CP038801
Spirochaetota
Treponema denticola ATCC 700771 [CP038801]
1978486
1978412
-
Ala
CGC
-
¡û
>C231045337
CP038802
Spirochaetota
Treponema putidum OMZ 847 [CP038802]
2218814
2218740
-
Ala
CGC
-
¡û
>C231045381
CP038803
Spirochaetota
Treponema putidum OMZ 846 [CP038803]
2195335
2195261
-
Ala
CGC
-
¡û
>C231045425
CP038804
Spirochaetota
Treponema putidum OMZ 835 [CP038804]
2015832
2015758
-
Ala
CGC
-
¡û
>C231062140
CP051198
Spirochaetota
Treponema sp. OMZ 787 [CP051198]
656926
657000
+
Ala
CGC
-
¡û
>C231062201
CP051199
Spirochaetota
Treponema sp. OMZ 788 [CP051199]
2233120
2233046
-
Ala
CGC
-
¡û
>C231062534
CP051302
Spirochaetota
Treponema denticola OMZ 853 [CP051302]
2091631
2091557
-
Ala
CGC
-
¡û
>C231062575
CP051303
Spirochaetota
Treponema denticola OT2B [CP051303]
2150930
2150856
-
Ala
CGC
-
¡û
>C231062618
CP051304
Spirochaetota
Treponema denticola CD-1 [CP051304]
2193374
2193300
-
Ala
CGC
-
¡û
>C231062747
CP051523
Spirochaetota
Treponema denticola OMZ 852 [CP051523]
2216842
2216768
-
Ala
CGC
-
¡û
>C231062949
CP051633
Spirochaetota
Treponema denticola OMZ 898 [CP051633]
2108249
2108175
-
Ala
CGC
-
¡û
>C231062992
CP051634
Spirochaetota
Treponema denticola OMZ 850 [CP051634]
2092376
2092302
-
Ala
CGC
-
¡û
>C231078242
CP058347
Spirochaetota
Treponema denticola OKA3 [CP058347]
2154474
2154400
-
Ala
CGC
-
¡û
>C231078565
CP058624
Spirochaetota
Treponema denticola OMZ 854 [CP058624]
135074
135148
+
Ala
CGC
-
¡û
>C231078663
CP058668
Spirochaetota
Treponema sp. B152 [CP058668]
2062349
2062275
-
Ala
CGC
-
¡û
>C231519350
CP109619
Spirochaetota
Treponema denticola KCOM 3500 [CP109619]
2248459
2248385
-
Ala
CGC
-
¡û
>W11115156
ADEC01000017
Spirochaetota
Treponema denticola F0402 [ADEC]
26352
26426
+
Ala
CGC
[ENA]
¡û
Identical group No.542503 (11 seq.)
>W141064712
AQCF01000037
Spirochaetota
Treponema phagedenis 4A [AQCF]
219287
219214
-
Ala
CGC
[ENA]
¡û
>W2010610763
JABRPI010000002
Spirochaetota
Treponema phagedenis KS1 [JABRPI]
695252
695325
+
Ala
CGC
[ENA]
¡û
>C211033596
CP027018
Spirochaetota
Treponema phagedenis T320A [CP027018]
1069105
1069178
+
Ala
CGC
-
¡û
>C211038767
CP031394
Spirochaetota
Treponema phagedenis Reiter [CP031394]
1758821
1758748
-
Ala
CGC
-
¡û
>W1510074540
CDNC01000011
Spirochaetota
Treponema phagedenis V1 [CDNC]
32704
32777
+
Ala
CGC
[ENA]
¡û
>C241068679
CP042813
Spirochaetota
Treponema phagedenis S11.1 [CP042813]
2826585
2826512
-
Ala
CGC
-
¡û
>C241068725
CP042815
Spirochaetota
Treponema phagedenis S2.3 [CP042815]
2801394
2801321
-
Ala
CGC
-
¡û
>C241068760
CP042816
Spirochaetota
Treponema phagedenis B31.4 [CP042816]
2764773
2764846
+
Ala
CGC
-
¡û
>C241068817
CP042817
Spirochaetota
Treponema phagedenis B36.5 [CP042817]
3116326
3116253
-
Ala
CGC
-
¡û
>C241068854
CP042818
Spirochaetota
Treponema phagedenis B43.1 [CP042818]
3020264
3020337
+
Ala
CGC
-
¡û
>C241168182
CP054692
Spirochaetota
Treponema phagedenis KS1 [CP054692]
2870023
2870096
+
Ala
CGC
-
¡û
Identical group No.542648 (1 seq.)
>C211095710
CP054142
Spirochaetota
Treponema parvum ATCC 700770 [CP054142]
2371039
2371111
+
Ala
CGC
-
¡û
Identical group No.542969 (8 seq.)
>WENV183641611
OQVL01056745
[OQVL] human gut metagenome; human gut
1
73
+
Ala
CGC
[ENA]
¡û
>WENV183643391
OQVO01011006
[OQVO] human gut metagenome; human gut
577
505
-
Ala
CGC
[ENA]
¡û
>WENV183644829
OQVQ01000050
[OQVQ] human gut metagenome; human gut
1524
1452
-
Ala
CGC
[ENA]
¡û
>WENV183649464
OQVT01001518
[OQVT] human gut metagenome; human gut
3056
2984
-
Ala
CGC
[ENA]
¡û
>WENV183652098
OQVU01015879
[OQVU] human gut metagenome; human gut
603
675
+
Ala
CGC
[ENA]
¡û
>WENV183653739
OQWA01000501
[OQWA] human gut metagenome; human gut
9458
9386
-
Ala
CGC
[ENA]
¡û
>WENV183657378
OQWI01009660
[OQWI] human gut metagenome; human gut
723
795
+
Ala
CGC
[ENA]
¡û
>C211195813
CP064936
Spirochaetota
Treponema sp. RCC2812 [CP064936]
468941
468869
-
Ala
CGC
-
¡û
Identical group No.543689 (10 seq.)
>WENV180809843
ODJK01057410
[ODJK] human metagenome; G_DNA_Subgingival plaque
199
272
+
Ala
CGC
[ENA]
¡û
>C231062239
CP051200
Spirochaetota
Treponema sp. OMZ 789 [CP051200]
2366318
2366245
-
Ala
CGC
-
¡û
>C231062282
CP051201
Spirochaetota
Treponema sp. OMZ 790 [CP051201]
2392527
2392454
-
Ala
CGC
-
¡û
>C231062325
CP051202
Spirochaetota
Treponema sp. OMZ 791 [CP051202]
2390164
2390091
-
Ala
CGC
-
¡û
>C231062366
CP051203
Spirochaetota
Treponema sp. OMZ 792 [CP051203]
2280755
2280681
-
Ala
CGC
-
¡û
>C231062469
CP051301
Spirochaetota
Treponema sp. OMZ 799 [CP051301]
687326
687400
+
Ala
CGC
-
¡û
>C231062655
CP051305
Spirochaetota
Treponema sp. OMZ 798 [CP051305]
2254270
2254196
-
Ala
CGC
-
¡û
>C231062684
CP051522
Spirochaetota
Treponema denticola OMZ 910 [CP051522]
655115
655188
+
Ala
CGC
-
¡û
>C231063044
CP051635
Spirochaetota
Treponema denticola OMZ 905 [CP051635]
2074659
2074586
-
Ala
CGC
-
¡û
>C231070464
CP054477
Spirochaetota
Treponema denticola OMZ 823 [CP054477]
2105720
2105647
-
Ala
CGC
-
¡û
Identical group No.545416 (37 seq.)
>WENV180709477
ODFJ01097173
[ODFJ] human metagenome; G_DNA_Tongue dorsum
250
176
-
Ala
CGC
[ENA]
¡û
>WENV180721965
ODGL01039544
[ODGL] human metagenome; G_DNA_Subgingival plaque
279
205
-
Ala
CGC
[ENA]
¡û
>WENV180735283
ODGZ01132939
[ODGZ] human metagenome; G_DNA_Supragingival plaque
6
80
+
Ala
CGC
[ENA]
¡û
>WENV180749854
ODHS01000047
[ODHS] human metagenome; G_DNA_Supragingival plaque
304
230
-
Ala
CGC
[ENA]
¡û
>WENV180769069
ODIG01031119
[ODIG] human metagenome; G_DNA_Tongue dorsum
567
644
+
Ala
CGC
[ENA]
¡û
>WENV180803259
ODJE01071094
[ODJE] human metagenome; G_DNA_Tongue dorsum
438
361
-
Ala
CGC
[ENA]
¡û
>WENV180809343
ODJK01013244
[ODJK] human metagenome; G_DNA_Subgingival plaque
1462
1536
+
Ala
CGC
[ENA]
¡û
>WENV180843657
ODKN01007094
[ODKN] human metagenome; G_DNA_Supragingival plaque
3039
2966
-
Ala
CGC
[ENA]
¡û
>WENV180843846
ODKN01014467
[ODKN] human metagenome; G_DNA_Supragingival plaque
1647
1721
+
Ala
CGC
[ENA]
¡û
>WENV180882784
ODMC01000517
[ODMC] human metagenome; G_DNA_Tongue dorsum
29133
29207
+
Ala
CGC
[ENA]
¡û
>WENV180924753
ODTK01014626
[ODTK] human metagenome; G_DNA_Supragingival plaque
1051
1125
+
Ala
CGC
[ENA]
¡û
>WENV180930852
ODTP01000498
[ODTP] human metagenome; G_DNA_Tongue dorsum
626
552
-
Ala
CGC
[ENA]
¡û
>WENV180938454
ODTX01002129
[ODTX] human metagenome; G_DNA_Supragingival plaque
10702
10776
+
Ala
CGC
[ENA]
¡û
>WENV180945325
ODUC01115646
[ODUC] human metagenome; G_DNA_Supragingival plaque
138
212
+
Ala
CGC
[ENA]
¡û
>WENV180950096
ODUG01080435
[ODUG] human metagenome; G_DNA_Tongue dorsum
452
378
-
Ala
CGC
[ENA]
¡û
>WENV180951340
ODUH01018130
[ODUH] human metagenome; G_DNA_Subgingival plaque
653
579
-
Ala
CGC
[ENA]
¡û
>WENV180951411
ODUH01021708
[ODUH] human metagenome; G_DNA_Subgingival plaque
445
518
+
Ala
CGC
[ENA]
¡û
>WENV180955271
ODUJ01066933
[ODUJ] human metagenome; G_DNA_Tongue dorsum
94
20
-
Ala
CGC
[ENA]
¡û
>WENV181039723
ODXQ01045856
[ODXQ] human metagenome; G_DNA_Tongue dorsum
263
337
+
Ala
CGC
[ENA]
¡û
>WENV181050459
ODYD01019693
[ODYD] human metagenome; G_DNA_Supragingival plaque
1473
1547
+
Ala
CGC
[ENA]
¡û
>WENV181073306
OEAO01000086
[OEAO] human metagenome; G_DNA_Tongue dorsum
81028
81102
+
Ala
CGC
[ENA]
¡û
>WENV181076151
OEAP01002067
[OEAP] human metagenome; G_DNA_Supragingival plaque
327
253
-
Ala
CGC
[ENA]
¡û
>WENV181079195
OEAS01002873
[OEAS] human metagenome; G_DNA_Supragingival plaque
8721
8795
+
Ala
CGC
[ENA]
¡û
>WENV181091438
OEBC01034104
[OEBC] human metagenome; G_DNA_Supragingival plaque
304
230
-
Ala
CGC
[ENA]
¡û
>WENV181095784
OEBY01020053
[OEBY] human metagenome; G_DNA_Tongue dorsum
562
488
-
Ala
CGC
[ENA]
¡û
>WENV181103301
OECT01062474
[OECT] human metagenome; G_DNA_Tongue dorsum
259
185
-
Ala
CGC
[ENA]
¡û
>WENV181105150
OEED01001271
[OEED] human metagenome; G_DNA_Tongue dorsum
14010
14084
+
Ala
CGC
[ENA]
¡û
>WENV181138758
OEGN01000584
[OEGN] human metagenome; G_DNA_Tongue dorsum
23224
23298
+
Ala
CGC
[ENA]
¡û
>WENV181146650
OEHQ01013958
[OEHQ] human metagenome; G_DNA_Supragingival plaque
320
247
-
Ala
CGC
[ENA]
¡û
>WENV181151266
OEHW01032310
[OEHW] human metagenome; G_DNA_Tongue dorsum
41
115
+
Ala
CGC
[ENA]
¡û
>WENV181178595
OEJT01000075
[OEJT] human metagenome; G_DNA_Supragingival plaque
304
230
-
Ala
CGC
[ENA]
¡û
>WENV181183011
OEJV01112870
[OEJV] human metagenome; G_DNA_Supragingival plaque
225
151
-
Ala
CGC
[ENA]
¡û
>C211083857
CP050497
Spirochaetota
Treponema sp. OMZ 806 [CP050497]
219639
219566
-
Ala
CGC
-
¡û
>C231062008
CP051195
Spirochaetota
Treponema sp. OMZ 803 BF2M [CP051195]
2568098
2568024
-
Ala
CGC
-
¡û
>C231062055
CP051196
Spirochaetota
Treponema sp. OMZ 906 [CP051196]
2605427
2605353
-
Ala
CGC
-
¡û
>C231062465
CP051300
Spirochaetota
Treponema sp. OMZ 305 [CP051300]
214703
214630
-
Ala
CGC
-
¡û
>C241127273
CP048020
Spirochaetota
Treponema vincentii OMZ 804 [CP048020]
2742635
2742561
-
Ala
CGC
-
¡û
Identical group No.551475 (9 seq.)
>W141055901
AOTM01000061
Spirochaetota
Treponema pedis str. T M1 [AOTM]
9191
9263
+
Ala
CGC
[ENA]
¡û
>W141055940
AOTN01000089
Spirochaetota
Treponema pedis str. B 683 [AOTN]
4360
4288
-
Ala
CGC
[ENA]
¡û
>W141055991
AOTO01000456
Spirochaetota
Treponema pedis isoM1111 [AOTO]
1030
1102
+
Ala
CGC
[ENA]
¡û
>W141056033
AOTP01000127
Spirochaetota
Treponema pedis isoE1186 [AOTP]
4362
4290
-
Ala
CGC
[ENA]
¡û
>W141056061
AOTQ01000046
Spirochaetota
Treponema pedis isoM1220 [AOTQ]
9139
9211
+
Ala
CGC
[ENA]
¡û
>W141056120
AOTR01000107
Spirochaetota
Treponema pedis isoM1224 [AOTR]
9175
9247
+
Ala
CGC
[ENA]
¡û
>C141003686
CP004120
Spirochaetota
Treponema pedis str. T A4 [CP004120]
1517537
1517465
-
Ala
CGC
[Ensembl]
¡û
>C211064893
CP045670
Spirochaetota
Treponema pedis T3552B [CP045670]
1516321
1516249
-
Ala
CGC
-
¡û
>C211154055
CP061839
Spirochaetota
Treponema pedis KS1 [CP061839]
1180102
1180030
-
Ala
CGC
-
¡û
Identical group No.551561 (38 seq.)
>W131205839
ATFD01000004
Spirochaetota
Treponema socranskii subsp. paredis ATCC 35535 [ATFD]
46722
46794
+
Ala
CGC
[ENA]
¡û
>WENV180721570
ODGL01002253
[ODGL] human metagenome; G_DNA_Subgingival plaque
2360
2287
-
Ala
CGC
[ENA]
¡û
>WENV180727217
ODGU01003171
[ODGU] human metagenome; G_DNA_Supragingival plaque
4456
4383
-
Ala
CGC
[ENA]
¡û
>WENV180734530
ODGZ01011747
[ODGZ] human metagenome; G_DNA_Supragingival plaque
1636
1709
+
Ala
CGC
[ENA]
¡û
>WENV180750259
ODHS01001038
[ODHS] human metagenome; G_DNA_Supragingival plaque
5419
5346
-
Ala
CGC
[ENA]
¡û
>WENV180765178
ODIB01034515
[ODIB] human metagenome; G_DNA_Supragingival plaque
359
432
+
Ala
CGC
[ENA]
¡û
>WENV180769553
ODIG01092714
[ODIG] human metagenome; G_DNA_Tongue dorsum
401
328
-
Ala
CGC
[ENA]
¡û
>WENV180788858
ODIS01134197
[ODIS] human metagenome; G_DNA_Supragingival plaque
199
272
+
Ala
CGC
[ENA]
¡û
>WENV180798327
ODJB01428499
[ODJB] human metagenome; G_DNA_Supragingival plaque
8
80
+
Ala
CGC
[ENA]
¡û
>WENV180805075
ODJG01052626
[ODJG] human metagenome; G_DNA_Supragingival plaque
403
330
-
Ala
CGC
[ENA]
¡û
>WENV180809899
ODJK01067641
[ODJK] human metagenome; G_DNA_Subgingival plaque
469
396
-
Ala
CGC
[ENA]
¡û
>WENV180814811
ODJO01060334
[ODJO] human metagenome; G_DNA_Supragingival plaque
529
601
+
Ala
CGC
[ENA]
¡û
>WENV180847861
ODKT01219599
[ODKT] human metagenome; G_DNA_Supragingival plaque
237
165
-
Ala
CGC
[ENA]
¡û
>WENV180889821
ODMN01167023
[ODMN] human metagenome; G_DNA_Supragingival plaque
100
173
+
Ala
CGC
[ENA]
¡û
>WENV180923127
ODTJ01049337
[ODTJ] human metagenome; G_DNA_Supragingival plaque
522
594
+
Ala
CGC
[ENA]
¡û
>W141091793
AUZJ01000009
Spirochaetota
Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AUZJ]
53938
54010
+
Ala
CGC
[ENA]
¡û
>WENV180939360
ODTX01030425
[ODTX] human metagenome; G_DNA_Supragingival plaque
288
361
+
Ala
CGC
[ENA]
¡û
>WENV180944305
ODUC01012961
[ODUC] human metagenome; G_DNA_Supragingival plaque
3096
3024
-
Ala
CGC
[ENA]
¡û
>WENV180952118
ODUH01129874
[ODUH] human metagenome; G_DNA_Subgingival plaque
250
177
-
Ala
CGC
[ENA]
¡û
>WENV180968968
ODUT01152729
[ODUT] human metagenome; G_DNA_Tongue dorsum
193
120
-
Ala
CGC
[ENA]
¡û
>WENV180975016
ODUY01000837
[ODUY] human metagenome; G_DNA_Supragingival plaque
203
276
+
Ala
CGC
[ENA]
¡û
>WENV180976218
ODUY01060723
[ODUY] human metagenome; G_DNA_Supragingival plaque
151
79
-
Ala
CGC
[ENA]
¡û
>WENV180981874
ODVE01078620
[ODVE] human metagenome; G_DNA_Supragingival plaque
523
451
-
Ala
CGC
[ENA]
¡û
>WENV180998919
ODVT01003305
[ODVT] human metagenome; G_DNA_Buccal mucosa
2451
2524
+
Ala
CGC
[ENA]
¡û
>WENV181020425
ODWU01187697
[ODWU] human metagenome; G_DNA_Supragingival plaque
116
44
-
Ala
CGC
[ENA]
¡û
>WENV181051122
ODYD01194535
[ODYD] human metagenome; G_DNA_Supragingival plaque
219
147
-
Ala
CGC
[ENA]
¡û
>WENV181064927
ODYP01156421
[ODYP] human metagenome; G_DNA_Supragingival plaque
223
151
-
Ala
CGC
[ENA]
¡û
>WENV181077859
OEAP01189863
[OEAP] human metagenome; G_DNA_Supragingival plaque
189
116
-
Ala
CGC
[ENA]
¡û
>WENV181080816
OEAS01085361
[OEAS] human metagenome; G_DNA_Supragingival plaque
374
302
-
Ala
CGC
[ENA]
¡û
>W141107075
AVQI01000050
Spirochaetota
Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
36064
36136
+
Ala
CGC
[ENA]
¡û
>WENV181091564
OEBC01049052
[OEBC] human metagenome; G_DNA_Supragingival plaque
67
140
+
Ala
CGC
[ENA]
¡û
>WENV181113791
OEEL01117459
[OEEL] human metagenome; G_DNA_Tongue dorsum
2
75
+
Ala
CGC
[ENA]
¡û
>WENV181151581
OEHW01079118
[OEHW] human metagenome; G_DNA_Tongue dorsum
381
309
-
Ala
CGC
[ENA]
¡û
>WENV181180196
OEJT01120899
[OEJT] human metagenome; G_DNA_Supragingival plaque
154
81
-
Ala
CGC
[ENA]
¡û
>W2110250947
JACSET010000011
Spirochaetota
Treponema sp. Marseille-Q4130 [JACSET]
56890
56818
-
Ala
CGC
[ENA]
¡û
>W2110492803
JAFEVM010000029
Spirochaetota
Treponema sp. Marseille-Q4523 [JAFEVM]
27324
27396
+
Ala
CGC
[ENA]
¡û
>C201314804
LR796240
Spirochaetota
Treponema socranskii subsp. buccale Marseille-CSURQ0203 [LR796240]
1905253
1905326
+
Ala
CGC
-
¡û
>C231070082
CP054258
Spirochaetota
Treponema socranskii subsp. buccale ATCC 35534 [CP054258]
525739
525666
-
Ala
CGC
-
¡û
Identical group No.556603 (33 seq.)
>W131205939
ATFF01000006
Spirochaetota
Treponema maltophilum ATCC 51939 [ATFF]
1718419
1718345
-
Ala
CGC
[ENA]
¡û
>WENV180231308
OBCN01009282
[OBCN] human gut metagenome; human gut
846
774
-
Ala
CGC
[ENA]
¡û
>WENV180338079
OBLI01000015
[OBLI] pig gut metagenome; faeces
78700
78628
-
Ala
CGC
[ENA]
¡û
>WENV180728831
ODGU01103336
[ODGU] human metagenome; G_DNA_Supragingival plaque
232
306
+
Ala
CGC
[ENA]
¡û
>WENV180751332
ODHS01043326
[ODHS] human metagenome; G_DNA_Supragingival plaque
769
841
+
Ala
CGC
[ENA]
¡û
>WENV180788510
ODIS01070956
[ODIS] human metagenome; G_DNA_Supragingival plaque
625
699
+
Ala
CGC
[ENA]
¡û
>WENV180809232
ODJK01007938
[ODJK] human metagenome; G_DNA_Subgingival plaque
2016
2090
+
Ala
CGC
[ENA]
¡û
>WENV180824956
ODJX01136509
[ODJX] human metagenome; G_DNA_Supragingival plaque
73
147
+
Ala
CGC
[ENA]
¡û
>WENV180847816
ODKT01193054
[ODKT] human metagenome; G_DNA_Supragingival plaque
226
152
-
Ala
CGC
[ENA]
¡û
>WENV180939080
ODTX01014453
[ODTX] human metagenome; G_DNA_Supragingival plaque
2090
2164
+
Ala
CGC
[ENA]
¡û
>WENV180944479
ODUC01019082
[ODUC] human metagenome; G_DNA_Supragingival plaque
1824
1750
-
Ala
CGC
[ENA]
¡û
>WENV180950948
ODUH01004756
[ODUH] human metagenome; G_DNA_Subgingival plaque
3855
3929
+
Ala
CGC
[ENA]
¡û
>WENV180976694
ODUY01200686
[ODUY] human metagenome; G_DNA_Supragingival plaque
155
229
+
Ala
CGC
[ENA]
¡û
>WENV180981607
ODVE01036199
[ODVE] human metagenome; G_DNA_Supragingival plaque
534
608
+
Ala
CGC
[ENA]
¡û
>WENV181009721
ODWE01172974
[ODWE] human metagenome; G_DNA_Supragingival plaque
194
120
-
Ala
CGC
[ENA]
¡û
>WENV181051209
ODYD01266742
[ODYD] human metagenome; G_DNA_Supragingival plaque
113
39
-
Ala
CGC
[ENA]
¡û
>WENV181064725
ODYP01084345
[ODYP] human metagenome; G_DNA_Supragingival plaque
317
391
+
Ala
CGC
[ENA]
¡û
>WENV181076219
OEAP01002670
[OEAP] human metagenome; G_DNA_Supragingival plaque
4611
4537
-
Ala
CGC
[ENA]
¡û
>WENV181081257
OEAS01162705
[OEAS] human metagenome; G_DNA_Supragingival plaque
101
175
+
Ala
CGC
[ENA]
¡û
>WENV181091285
OEBC01022698
[OEBC] human metagenome; G_DNA_Supragingival plaque
1071
999
-
Ala
CGC
[ENA]
¡û
>WENV181179471
OEJT01005661
[OEJT] human metagenome; G_DNA_Supragingival plaque
959
885
-
Ala
CGC
[ENA]
¡û
>W141146203
AWVH01000045
Spirochaetota
Treponema lecithinolyticum ATCC 700332 [AWVH]
4592
4518
-
Ala
CGC
[ENA]
¡û
>WENV182524222
OIWT01000079
[OIWT] human gut metagenome; faeces
94212
94284
+
Ala
CGC
[ENA]
¡û
>WENV182528449
OIWU01003809
[OIWU] human gut metagenome; faeces
10993
10921
-
Ala
CGC
[ENA]
¡û
>WENV183044652
OLGE01001821
[OLGE] human gut metagenome; faeces
9075
9147
+
Ala
CGC
[ENA]
¡û
>WENV183640748
OQVL01009833
[OQVL] human gut metagenome; human gut
4383
4311
-
Ala
CGC
[ENA]
¡û
>WENV183642139
OQVN01000055
[OQVN] human gut metagenome; human gut
23868
23940
+
Ala
CGC
[ENA]
¡û
>WENV183643139
OQVO01002085
[OQVO] human gut metagenome; human gut
602
674
+
Ala
CGC
[ENA]
¡û
>WENV183646374
OQVR01001886
[OQVR] human gut metagenome; human gut
3714
3642
-
Ala
CGC
[ENA]
¡û
>WENV183648906
OQVS01055983
[OQVS] human gut metagenome; human gut
255
183
-
Ala
CGC
[ENA]
¡û
>WENV183656776
OQWI01000190
[OQWI] human gut metagenome; human gut
17861
17789
-
Ala
CGC
[ENA]
¡û
>WENV183658298
OQWM01001294
[OQWM] human gut metagenome; human gut
4031
4103
+
Ala
CGC
[ENA]
¡û
>C11123122
CP002631
Spirochaetota
Treponema succinifaciens DSM 2489 [CP002631]
25418
25346
-
Ala
CGC
[Ensembl]
¡û
Identical group No.567952 (7 seq.)
>WENV180976719
ODUY01211819
[ODUY] human metagenome; G_DNA_Supragingival plaque
229
156
-
Ala
CGC
[ENA]
¡û
>WENV170669409
LAHS01000131
[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
18610
18682
+
Ala
CGC
[ENA]
¡û
>W2011812445
UFQJ01000016
Spirochaetota
Treponema pectinovorum Marseille-2-CSURP6642 [UFQJ]
44267
44194
-
Ala
CGC
[ENA]
¡û
>W2011812599
UFQN01000045
Spirochaetota
Treponema pectinovorum Marseille-4-CSURP7639 [UFQN]
3348
3421
+
Ala
CGC
[ENA]
¡û
>W2011812616
UFQO01000002
Spirochaetota
Treponema pectinovorum Marseille-3-CSURP7641 [UFQO]
173816
173889
+
Ala
CGC
[ENA]
¡û
>W2011861574
UOUI01000007
Spirochaetota
Treponema pectinovorum Marseille-1-CSURP6641 [UOUI]
184689
184762
+
Ala
CGC
[ENA]
¡û
>W2011862320
UPSF01000001
Spirochaetota
Treponema pectinovorum ATCC 700769 [UPSF]
1392774
1392847
+
Ala
CGC
[ENA]
¡û
Identical group No.574779 (3 seq.)
>WENV180342042
OBLI01381573
[OBLI] pig gut metagenome; faeces
13
86
+
Ala
CGC
[ENA]
¡û
>WENV183199153
OLPV01017303
[OLPV] human gut metagenome; faeces
1581
1654
+
Ala
CGC
[ENA]
¡û
>W1710601227
FUXC01000004
Spirochaetota
Treponema berlinense [FUXC]
33651
33724
+
Ala
CGC
[ENA]
¡û
Identical group No.595341 (10 seq.)
>WENV180229140
OBCH01000772
[OBCH] human gut metagenome; human gut
5018
5092
+
Ala
CGC
[ENA]
¡û
>WENV180230671
OBCM01000031
[OBCM] human gut metagenome; human gut
7049
6975
-
Ala
CGC
[ENA]
¡û
>WENV180404253
OBSA01000001
[OBSA] human gut metagenome; ENVO:feces
458231
458305
+
Ala
CGC
[ENA]
¡û
>WENV180561607
OCKZ01000058
[OCKZ] human gut metagenome; human gut
20537
20611
+
Ala
CGC
[ENA]
¡û
>WENV180597359
OCPL01000003
[OCPL] human gut metagenome; ENVO:feces
34136
34210
+
Ala
CGC
[ENA]
¡û
>WENV182524972
OIWT01000981
[OIWT] human gut metagenome; faeces
133
59
-
Ala
CGC
[ENA]
¡û
>WENV182527825
OIWU01000854
[OIWU] human gut metagenome; faeces
133
59
-
Ala
CGC
[ENA]
¡û
>WENV183044345
OLGE01000826
[OLGE] human gut metagenome; faeces
132
58
-
Ala
CGC
[ENA]
¡û
>WENV183642297
OQVN01001216
[OQVN] human gut metagenome; human gut
6547
6473
-
Ala
CGC
[ENA]
¡û
>W1710600220
FUWG01000006
Spirochaetota
Treponema porcinum [FUWG]
80523
80451
-
Ala
CGC
[ENA]
¡û
Identical group No.600368 (7 seq.)
>WENV180001231
FLNX01000592
[FLNX] bioreactor metagenome; Moose rumen
2672
2746
+
Ala
CGC
[ENA]
¡û
>WENV180001738
FLNX01003034
[FLNX] bioreactor metagenome; Moose rumen
2286
2361
+
Ala
CGC
[ENA]
¡û
>WENV180003092
FLNY01004848
[FLNY] bioreactor metagenome; Moose rumen
7044
7118
+
Ala
CGC
[ENA]
¡û
>WENV180655523
OCVV010454587
[OCVV] gut metagenome; gut
334
260
-
Ala
CGC
[ENA]
¡û
>WENV180655524
OCVV010454587
[OCVV] gut metagenome; gut
334
260
-
Ala
CGC
[ENA]
¡û
>C241008299
AP025288
Spirochaetota
Treponema saccharophilum JCM 32279 [AP025288]
2365497
2365424
-
Ala
CGC
-
¡û
>W121017602
AGRW01000037
Spirochaetota
Treponema saccharophilum DSM 2985 [AGRW]
49125
49200
+
Ala
CGC
[ENA]
¡û
Identical group No.613496 (3 seq.)
>W1711137436
LVBJ01000057
Spirochaetota
Spirochaetales bacterium Spiro_08 [LVBJ]
26463
26390
-
Ala
CGC
[ENA]
¡û
>C11122409
CP002696
Spirochaetota
Treponema brennaborense DSM 12168 [CP002696]
466228
466301
+
Ala
CGC
[Ensembl]
¡û
>W1610948556
LVBJ01000057
Spirochaetota
Spirochaetales bacterium Spiro_08 [LVBJ]
26463
26390
-
Ala
CGC
[ENA]
¡û
Identical group No.620192 (2 seq.)
>C121010223
CP003282
Spirochaetota
Spirochaeta africana DSM 8902 [CP003282]
2697209
2697281
+
Ala
CGC
[Ensembl]
¡û
>W121017717
AGRZ01000062
Spirochaetota
Spirochaeta africana DSM 8902 [AGRZ]
34441
34369
-
Ala
CGC
[ENA]
¡û
Identical group No.620500 (1 seq.)
>C11122386
CP001841
Spirochaetota
Leadbettera azotonutricia ZAS-9 [CP001841]
3196257
3196185
-
Ala
CGC
[Ensembl]
¡û
Identical group No.632386 (2 seq.)
>W2012106385
VOQA01000001
Spirochaetota
Treponema phagedenis ATCC 27087 [VOQA]
2006466
2006539
+
Ala
CGC
[ENA]
¡û
>W11135655
AEFH01000129
Spirochaetota
Treponema phagedenis F0421 [AEFH]
104
31
-
Ala
CGC
[ENA]
¡û
Identical group No.633519 (6 seq.)
>W1510014393
BBPV01000787
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. C1 [BBPV]
263
189
-
Ala
CGC
[ENA]
¡û
>W1510014423
BBPW01000458
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. D11 [BBPW]
313
239
-
Ala
CGC
[ENA]
¡û
>W1510014438
BBPX01000110
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. D2 [BBPX]
3129
3057
-
Ala
CGC
[ENA]
¡û
>W1510014456
BBPX01000274
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. D2 [BBPX]
1001
927
-
Ala
CGC
[ENA]
¡û
>W1510014475
BBPY01000013
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. E12 [BBPY]
12138
12212
+
Ala
CGC
[ENA]
¡û
>W1510014509
BBPZ01000008
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. E8 [BBPZ]
5398
5326
-
Ala
CGC
[ENA]
¡û
Identical group No.646059 (5 seq.)
>W1711137496
LVBL01000025
Spirochaetota
Spirochaetales bacterium Spiro_10 [LVBL]
17
89
+
Ala
CGC
[ENA]
¡û
>WENV180751867
ODHS01233317
[ODHS] human metagenome; G_DNA_Supragingival plaque
126
198
+
Ala
CGC
[ENA]
¡û
>WENV170688138
LFRM01229725
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
1917
1842
-
Ala
CGC
[ENA]
¡û
>WENV170725340
LSQX01339440
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
4035
3960
-
Ala
CGC
[ENA]
¡û
>W1610948616
LVBL01000025
Spirochaetota
Spirochaetales bacterium Spiro_10 [LVBL]
17
89
+
Ala
CGC
[ENA]
¡û
Identical group No.665806 (1 seq.)
>W1711422181
MIAS01000121
Spirochaetota
Spirochaetes bacterium GWB1_66_5 [MIAS]
4621
4549
-
Ala
CGC
[ENA]
¡û
Identical group No.668044 (2 seq.)
>W2010700167
JACHFQ010000010
Spirochaetota
Treponema ruminis DSM 103462 [JACHFQ]
127
53
-
Ala
CGC
[ENA]
¡û
>C211039055
CP031518
Spirochaetota
Treponema ruminis RU1 [CP031518]
286661
286735
+
Ala
CGC
-
¡û
Identical group No.668115 (2 seq.)
>C211096369
CP054257
Spirochaetota
Treponema parvum ATCC 700773 [CP054257]
347631
347559
-
Ala
CGC
-
¡û
>C211116273
CP058315
Spirochaetota
Treponema parvum OMZ 843 [CP058315]
2283336
2283410
+
Ala
CGC
-
¡û
Identical group No.704079 (2 seq.)
>W1711137269
LVBE01000049
Spirochaetota
Spirochaetales bacterium Spiro_03 [LVBE]
3832
3904
+
Ala
CGC
[ENA]
¡û
>W1610948389
LVBE01000049
Spirochaetota
Spirochaetales bacterium Spiro_03 [LVBE]
3832
3904
+
Ala
CGC
[ENA]
¡û
Identical group No.706781 (1 seq.)
>C211033541
CP027017
Spirochaetota
Treponema medium T19 [CP027017]
1011157
1011230
+
Ala
CGC
-
¡û
Identical group No.708542 (1 seq.)
>C121007047
CP003155
Spirochaetota
Sphaerochaeta pleomorpha str. Grapes [CP003155]
1985324
1985396
+
Ala
CGC
[Ensembl]
¡û
Identical group No.708652 (1 seq.)
>C11119865
CP002659
Spirochaetota
Parasphaerochaeta coccoides DSM 17374 [CP002659]
216498
216426
-
Ala
CGC
[Ensembl]
¡û
Identical group No.716393 (1 seq.)
>W2110740599
JPUF01000045
Spirochaetota
Treponema zioleckii kT3 [JPUF]
105
32
-
Ala
CGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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