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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Spirochaetota
Anticodon = CTC
HIT:
58 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.268070 (1 seq.)
>W1750061072
MIAQ01000234
Spirochaetota
Spirochaetes bacterium GWB1_59_5 [MIAQ]
18361
18281
-
Glu
CTC
[ENA]
¡û
Identical group No.284988 (5 seq.)
>WENV180013734
FMSI01144663
[FMSI] soil metagenome; Soil
7783
7707
-
Glu
CTC
[ENA]
¡û
>WENV180014848
FQKF010176098
[FQKF] soil metagenome; Soil
2
78
+
Glu
CTC
[ENA]
¡û
>WENV180036799
FVAA010347310
[FVAA] soil metagenome; Soil
227
303
+
Glu
CTC
[ENA]
¡û
>C231063828
CP053071
Spirochaetota
Brevinematales bacterium NS [CP053071]
1624302
1624378
+
Glu
CTC
-
¡û
>C231131210
CP073355
Spirochaetota
Thermospira aquatica F1F22 [CP073355]
1207840
1207916
+
Glu
CTC
-
¡û
Identical group No.332558 (1 seq.)
>W1711422133
MIAQ01000348
Spirochaetota
Spirochaetes bacterium GWB1_59_5 [MIAQ]
10015
9939
-
Glu
CTC
[ENA]
¡û
Identical group No.404762 (3 seq.)
>WENV180668641
OCVV011264932
[OCVV] gut metagenome; gut
6246
6322
+
Glu
CTC
[ENA]
¡û
>WENV180668642
OCVV011264932
[OCVV] gut metagenome; gut
6246
6322
+
Glu
CTC
[ENA]
¡û
>C211039008
CP031517
Spirochaetota
Treponema rectale CHPA [CP031517]
377419
377495
+
Glu
CTC
-
¡û
Identical group No.536661 (1 seq.)
>W1711422604
MIBE01000067
Spirochaetota
Spirochaetes bacterium GWF1_51_8 [MIBE]
21429
21501
+
Glu
CTC
[ENA]
¡û
Identical group No.540518 (7 seq.)
>WENV180669022
OCVV011271211
[OCVV] gut metagenome; gut
1497
1425
-
Glu
CTC
[ENA]
¡û
>WENV180669024
OCVV011271211
[OCVV] gut metagenome; gut
1497
1425
-
Glu
CTC
[ENA]
¡û
>WENV170778230
LXOW01373873
[LXOW] bovine gut metagenome; Cow rumen
2132
2057
-
Glu
CTC
[ENA]
¡û
>W142000977
JHVB01000008
Spirochaetota
Treponema sp. C6A8 [JHVB]
82851
82777
-
Glu
CTC
[ENA]
¡û
>W2010700145
JACHFQ010000004
Spirochaetota
Treponema ruminis DSM 103462 [JACHFQ]
380397
380472
+
Glu
CTC
[ENA]
¡û
>C211039073
CP031518
Spirochaetota
Treponema ruminis RU1 [CP031518]
2313359
2313284
-
Glu
CTC
-
¡û
>W122000106
AJGU01000002
Spirochaetota
Treponema sp. JC4 [AJGU]
117589
117513
-
Glu
CTC
[ENA]
¡û
Identical group No.542650 (2 seq.)
>C211095721
CP054142
Spirochaetota
Treponema parvum ATCC 700770 [CP054142]
1948372
1948298
-
Glu
CTC
-
¡û
>C211096336
CP054257
Spirochaetota
Treponema parvum ATCC 700773 [CP054257]
743402
743476
+
Glu
CTC
-
¡û
Identical group No.551476 (10 seq.)
>W141055900
AOTM01000056
Spirochaetota
Treponema pedis str. T M1 [AOTM]
2403
2475
+
Glu
CTC
[ENA]
¡û
>W141055947
AOTN01000149
Spirochaetota
Treponema pedis str. B 683 [AOTN]
2451
2379
-
Glu
CTC
[ENA]
¡û
>W141055996
AOTO01000593
Spirochaetota
Treponema pedis isoM1111 [AOTO]
677
749
+
Glu
CTC
[ENA]
¡û
>W141056010
AOTP01000015
Spirochaetota
Treponema pedis isoE1186 [AOTP]
7129
7201
+
Glu
CTC
[ENA]
¡û
>W141056082
AOTQ01000179
Spirochaetota
Treponema pedis isoM1220 [AOTQ]
660
732
+
Glu
CTC
[ENA]
¡û
>W141056116
AOTR01000088
Spirochaetota
Treponema pedis isoM1224 [AOTR]
2003
2075
+
Glu
CTC
[ENA]
¡û
>C141003659
CP004120
Spirochaetota
Treponema pedis str. T A4 [CP004120]
957543
957615
+
Glu
CTC
[Ensembl]
¡û
>W2010369634
CAFBSE010000218
Spirochaetota
Treponema pallidum subsp. pertenue R2-64919 [CAFBSE]
242
316
+
Glu
CTC
[ENA]
¡û
>C211064866
CP045670
Spirochaetota
Treponema pedis T3552B [CP045670]
956209
956281
+
Glu
CTC
-
¡û
>C211154021
CP061839
Spirochaetota
Treponema pedis KS1 [CP061839]
84752
84824
+
Glu
CTC
-
¡û
Identical group No.557175 (5 seq.)
>WENV180728530
ODGU01058906
[ODGU] human metagenome; G_DNA_Supragingival plaque
856
928
+
Glu
CTC
[ENA]
¡û
>WENV180787535
ODIS01007986
[ODIS] human metagenome; G_DNA_Supragingival plaque
181
253
+
Glu
CTC
[ENA]
¡û
>WENV181064828
ODYP01114229
[ODYP] human metagenome; G_DNA_Supragingival plaque
225
153
-
Glu
CTC
[ENA]
¡û
>WENV181080774
OEAS01080349
[OEAS] human metagenome; G_DNA_Supragingival plaque
886
958
+
Glu
CTC
[ENA]
¡û
>W2110250961
JACSEU010000001
Spirochaetota
Treponema sp. Marseille-Q3903 [JACSEU]
875007
875079
+
Glu
CTC
[ENA]
¡û
Identical group No.567956 (6 seq.)
>WENV180007245
FLRZ01260316
[FLRZ] metagenome; saliva
117
45
-
Glu
CTC
[ENA]
¡û
>W2011812451
UFQJ01000020
Spirochaetota
Treponema pectinovorum Marseille-2-CSURP6642 [UFQJ]
28507
28435
-
Glu
CTC
[ENA]
¡û
>W2011812586
UFQN01000007
Spirochaetota
Treponema pectinovorum Marseille-4-CSURP7639 [UFQN]
94482
94410
-
Glu
CTC
[ENA]
¡û
>W2011812631
UFQO01000006
Spirochaetota
Treponema pectinovorum Marseille-3-CSURP7641 [UFQO]
36035
36107
+
Glu
CTC
[ENA]
¡û
>W2011861546
UOUI01000001
Spirochaetota
Treponema pectinovorum Marseille-1-CSURP6641 [UOUI]
122368
122440
+
Glu
CTC
[ENA]
¡û
>W2011862316
UPSF01000001
Spirochaetota
Treponema pectinovorum ATCC 700769 [UPSF]
593444
593516
+
Glu
CTC
[ENA]
¡û
Identical group No.574987 (2 seq.)
>WENV183281204
OLSB01047942
[OLSB] human gut metagenome; faeces
394
468
+
Glu
CTC
[ENA]
¡û
>W1710600229
FUWG01000008
Spirochaetota
Treponema porcinum [FUWG]
10670
10744
+
Glu
CTC
[ENA]
¡û
Identical group No.616360 (4 seq.)
>WENV180653097
OCVV010155542
[OCVV] gut metagenome; gut
336
262
-
Glu
CTC
[ENA]
¡û
>WENV180653098
OCVV010155542
[OCVV] gut metagenome; gut
336
262
-
Glu
CTC
[ENA]
¡û
>W1710551089
FOFU01000004
Spirochaetota
Treponema bryantii [FOFU]
49469
49394
-
Glu
CTC
[ENA]
¡û
>W1710565610
FORI01000003
Spirochaetota
Treponema bryantii [FORI]
300095
300020
-
Glu
CTC
[ENA]
¡û
Identical group No.622732 (3 seq.)
>WENV180674078
OCVV011346834
[OCVV] gut metagenome; gut
139
211
+
Glu
CTC
[ENA]
¡û
>WENV180674080
OCVV011346834
[OCVV] gut metagenome; gut
139
211
+
Glu
CTC
[ENA]
¡û
>W132000264
ATWV01000002
Spirochaetota
Treponema bryantii NK4A124 [ATWV]
205535
205609
+
Glu
CTC
[ENA]
¡û
Identical group No.663022 (1 seq.)
>W2010700204
JACHFR010000003
Spirochaetota
Treponema rectale DSM 103679 [JACHFR]
411633
411707
+
Glu
CTC
[ENA]
¡û
Identical group No.667045 (2 seq.)
>C241008283
AP025288
Spirochaetota
Treponema saccharophilum JCM 32279 [AP025288]
812377
812450
+
Glu
CTC
-
¡û
>W122000032
AGRW01000049
Spirochaetota
Treponema saccharophilum DSM 2985 [AGRW]
36967
36894
-
Glu
CTC
[ENA]
¡û
Identical group No.716389 (2 seq.)
>W2110740566
JPUF01000003
Spirochaetota
Treponema zioleckii kT3 [JPUF]
23360
23286
-
Glu
CTC
[ENA]
¡û
>W2110740568
JPUF01000003
Spirochaetota
Treponema zioleckii kT3 [JPUF]
23127
23054
-
Glu
CTC
[ENA]
¡û
Identical group No.720143 (2 seq.)
>WENV183645912
OQVQ01042821
[OQVQ] human gut metagenome; human gut
216
144
-
Glu
CTC
[ENA]
¡û
>W1720001214
FUXC01000002
Spirochaetota
Treponema berlinense [FUXC]
283777
283705
-
Glu
CTC
[ENA]
¡û
Identical group No.734033 (3 seq.)
>WENV180014810
FQKF010157507
[FQKF] soil metagenome; Soil
330
401
+
Glu
CTC
[ENA]
¡û
>W1911630854
PTQW01000005
Spirochaetota
Treponema sp. J25 [PTQW]
55630
55701
+
Glu
CTC
[ENA]
¡û
>W2011221733
PTQW01000005
Spirochaetota
Treponema sp. J25 [PTQW]
55630
55701
+
Glu
CTC
[ENA]
¡û
Identical group No.741477 (44 seq.)
>C025728
AE000520
Spirochaetota
Treponema pallidum subsp. pallidum str. Nichols [AE000520]
125088
125159
+
Glu
CTC
[Ensembl]
¡û
>C191179227
CP040555
Spirochaetota
Treponema pallidum subsp. pallidum X-4 [CP040555]
125100
125173
+
Glu
CTC
-
¡û
>C151004476
CP003679
Spirochaetota
Treponema pallidum subsp. pallidum str. Sea 81-4 [CP003679]
125090
125163
+
Glu
CTC
[Ensembl]
¡û
>W2010369501
CAFBSC010000005
Spirochaetota
Treponema pallidum subsp. pertenue R7-PUT1-002 [CAFBSC]
2450
2377
-
Glu
CTC
[ENA]
¡û
>W2010369577
CAFBSD010000106
Spirochaetota
Treponema pallidum subsp. pertenue R8-KOS-007 [CAFBSD]
2352
2279
-
Glu
CTC
[ENA]
¡û
>W2010369587
CAFBSE010000012
Spirochaetota
Treponema pallidum subsp. pertenue R2-64919 [CAFBSE]
544
471
-
Glu
CTC
[ENA]
¡û
>W2010369666
CAGKKW010000014
Spirochaetota
Treponema pallidum subsp. pertenue R3-SAL-007 [CAGKKW]
17963
18036
+
Glu
CTC
[ENA]
¡û
>W2010369723
CAGKKX010000279
Spirochaetota
Treponema pallidum subsp. pertenue R2-106190 [CAGKKX]
248
175
-
Glu
CTC
[ENA]
¡û
>W2010369747
CAGKKY010000046
Spirochaetota
Treponema pallidum subsp. pertenue R7-KUN2-001 [CAGKKY]
633
706
+
Glu
CTC
[ENA]
¡û
>W2011168211
OMHU01000004
Spirochaetota
Treponema pallidum A12 [OMHU]
2917
2990
+
Glu
CTC
[ENA]
¡û
>W2011168250
OMHW01000001
Spirochaetota
Treponema pallidum BNK07 [OMHW]
125087
125160
+
Glu
CTC
[ENA]
¡û
>W2011168300
OMHZ01000009
Spirochaetota
Treponema pallidum SNK05 [OMHZ]
19460
19533
+
Glu
CTC
[ENA]
¡û
>W2011169282
OMPM01000001
Spirochaetota
Treponema pallidum A10 [OMPM]
125088
125161
+
Glu
CTC
[ENA]
¡û
>C231360382
CP095415
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL8 [CP095415]
125102
125175
+
Glu
CTC
-
¡û
>C231360426
CP095416
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL5 [CP095416]
125101
125174
+
Glu
CTC
-
¡û
>C231360470
CP095417
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL4 [CP095417]
125098
125171
+
Glu
CTC
-
¡û
>C231360514
CP095418
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL3 [CP095418]
125096
125169
+
Glu
CTC
-
¡û
>C231360558
CP095419
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL2 [CP095419]
125102
125175
+
Glu
CTC
-
¡û
>C231360602
CP095420
Spirochaetota
Treponema pallidum subsp. pallidum TpN-CL1 [CP095420]
125102
125175
+
Glu
CTC
-
¡û
>C241187257
CP094202
Spirochaetota
Treponema pallidum subsp. pertenue 6RUM2090716 [CP094202]
125100
125173
+
Glu
CTC
-
¡û
>C241187302
CP094268
Spirochaetota
Treponema pallidum subsp. pertenue 19LMF8280815 [CP094268]
125075
125148
+
Glu
CTC
-
¡û
>C241187954
CP094485
Spirochaetota
Treponema pallidum subsp. pertenue 22LMF5290815 [CP094485]
125085
125158
+
Glu
CTC
-
¡û
>C241187999
CP094486
Spirochaetota
Treponema pallidum subsp. pertenue 24SNM5151115 [CP094486]
125090
125163
+
Glu
CTC
-
¡û
>C10113577
CP001752
Spirochaetota
Treponema pallidum subsp. pallidum str. Chicago [CP001752]
125101
125174
+
Glu
CTC
[Ensembl]
¡û
>C10113621
CP000805
Spirochaetota
Treponema pallidum subsp. pallidum SS14 [CP000805]
125084
125157
+
Glu
CTC
[Ensembl]
¡û
>C121002395
CP002374
Spirochaetota
Treponema pallidum subsp. pertenue str. SamoaD [CP002374]
124784
124857
+
Glu
CTC
[Ensembl]
¡û
>C121002440
CP002375
Spirochaetota
Treponema pallidum subsp. pertenue str. CDC2 [CP002375]
125087
125160
+
Glu
CTC
[Ensembl]
¡û
>C121002485
CP002376
Spirochaetota
Treponema pallidum subsp. pertenue str. Gauthier [CP002376]
125086
125159
+
Glu
CTC
[Ensembl]
¡û
>C121006090
CP003115
Spirochaetota
Treponema pallidum subsp. pallidum DAL-1 [CP003115]
125096
125169
+
Glu
CTC
[Ensembl]
¡û
>C161017248
CP007548
Spirochaetota
Treponema pallidum subsp. endemicum str. Bosnia A [CP007548]
125069
125142
+
Glu
CTC
[Ensembl]
¡û
>C161028013
CP010558
Spirochaetota
Treponema pallidum subsp. pallidum Chicago Population [CP010558]
125100
125173
+
Glu
CTC
-
¡û
>C161028057
CP010559
Spirochaetota
Treponema pallidum subsp. pallidum CDC-A [CP010559]
125099
125172
+
Glu
CTC
-
¡û
>C161028101
CP010560
Spirochaetota
Treponema pallidum subsp. pallidum Nichols Houston [CP010560]
125097
125170
+
Glu
CTC
-
¡û
>C161028145
CP010561
Spirochaetota
Treponema pallidum subsp. pallidum Nichols Houston [CP010561]
125100
125173
+
Glu
CTC
-
¡û
>C161028189
CP010562
Spirochaetota
Treponema pallidum subsp. pallidum UW074B [CP010562]
125101
125174
+
Glu
CTC
-
¡û
>C161028233
CP010563
Spirochaetota
Treponema pallidum subsp. pallidum UW189B [CP010563]
125099
125172
+
Glu
CTC
-
¡û
>C161028278
CP010564
Spirochaetota
Treponema pallidum subsp. pallidum UW228B [CP010564]
125098
125171
+
Glu
CTC
-
¡û
>C161028322
CP010565
Spirochaetota
Treponema pallidum subsp. pallidum UW254B [CP010565]
125098
125171
+
Glu
CTC
-
¡û
>C161028366
CP010566
Spirochaetota
Treponema pallidum subsp. pallidum UW391B [CP010566]
125095
125168
+
Glu
CTC
-
¡û
>C161084197
CP015162
Spirochaetota
Treponema pallidum subsp. pallidum Amoy [CP015162]
1128309
1128382
+
Glu
CTC
-
¡û
>C131001852
CP003064
Spirochaetota
Treponema pallidum subsp. pallidum str. Mexico A [CP003064]
125099
125172
+
Glu
CTC
[Ensembl]
¡û
>C131009483
CP003902
Spirochaetota
Treponema pallidum str. Fribourg-Blanc [CP003902]
125090
125163
+
Glu
CTC
[Ensembl]
¡û
>C131011344
CP004010
Spirochaetota
Treponema pallidum subsp. pallidum str. Nichols [CP004010]
125098
125171
+
Glu
CTC
-
¡û
>C131011388
CP004011
Spirochaetota
Treponema pallidum subsp. pallidum SS14 [CP004011]
125097
125170
+
Glu
CTC
-
¡û
Identical group No.742995 (2 seq.)
>W1710790824
LJNB01000395
Spirochaetota
Spirochaetes bacterium DG_61 [LJNB]
5651
5724
+
Glu
CTC
[ENA]
¡û
>W1610654749
LJNB01000395
Spirochaetota
Spirochaetes bacterium DG_61 [LJNB]
5651
5724
+
Glu
CTC
[ENA]
¡û
Identical group No.745437 (17 seq.)
>W1711629528
MPPB01000146
Spirochaetota
Spirochaeta sp. EBM-43 [MPPB]
2955
3026
+
Glu
CTC
[ENA]
¡û
>WENV180346103
OBLN01026514
[OBLN] sediment metagenome; sediment
275
204
-
Glu
CTC
[ENA]
¡û
>WENV170007468
AMWB02127620
[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
500
571
+
Glu
CTC
[ENA]
¡û
>WENV170635206
JDSF01000284
[JDSF] bioreactor metagenome; continuous culture bioreactor denitrification-DNRA
4372
4443
+
Glu
CTC
[ENA]
¡û
>WENV170656416
JTFO01013790
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
740
669
-
Glu
CTC
[ENA]
¡û
>WENV170685165
LFRM01076314
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
2232
2303
+
Glu
CTC
[ENA]
¡û
>WENV170724751
LSQX01317404
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
77
148
+
Glu
CTC
[ENA]
¡û
>WENV170725836
LSQX01358640
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
14619
14548
-
Glu
CTC
[ENA]
¡û
>WENV170779163
LZCG01002796
[LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir
972
901
-
Glu
CTC
[ENA]
¡û
>W1910496474
FXUH01000016
Spirochaetota
Sphaerochaeta dissipatitropha GLS2 [FXUH]
46999
46928
-
Glu
CTC
[ENA]
¡û
>W1810893583
QUWK01000015
Spirochaetota
Sphaerochaeta halotolerans 4-11 [QUWK]
41682
41611
-
Glu
CTC
[ENA]
¡û
>W2010416228
FXUH01000016
Spirochaetota
Sphaerochaeta dissipatitropha GLS2 [FXUH]
46999
46928
-
Glu
CTC
[ENA]
¡û
>W2012444324
WUJG01000005
Spirochaetota
Sphaerochaeta halotolerans 585 [WUJG]
137117
137046
-
Glu
CTC
[ENA]
¡û
>W2110424606
JAEKNT010000095
Spirochaetota
Sphaerochaeta sp. S2 [JAEKNT]
1648
1719
+
Glu
CTC
[ENA]
¡û
>C231353534
CP094929
Spirochaetota
Sphaerochaeta associata GLS2T [CP094929]
1562460
1562531
+
Glu
CTC
-
¡û
>C11121303
CP002541
Spirochaetota
Sphaerochaeta globosa str. Buddy [CP002541]
1402065
1402136
+
Glu
CTC
[Ensembl]
¡û
>C121007073
CP003155
Spirochaetota
Sphaerochaeta pleomorpha str. Grapes [CP003155]
574681
574610
-
Glu
CTC
[Ensembl]
¡û
Identical group No.746902 (5 seq.)
>W1711136691
LVAL01000102
Bacillota
Clostridiales bacterium Firm_06 [LVAL]
3493
3420
-
Glu
CTC
[ENA]
¡û
>W1711137407
LVBJ01000016
Spirochaetota
Spirochaetales bacterium Spiro_08 [LVBJ]
9528
9599
+
Glu
CTC
[ENA]
¡û
>C11122450
CP002696
Spirochaetota
Treponema brennaborense DSM 12168 [CP002696]
1504436
1504365
-
Glu
CTC
[Ensembl]
¡û
>W1610947811
LVAL01000102
Bacillota
Clostridiales bacterium Firm_06 [LVAL]
3493
3420
-
Glu
CTC
[ENA]
¡û
>W1610948527
LVBJ01000016
Spirochaetota
Spirochaetales bacterium Spiro_08 [LVBJ]
9528
9599
+
Glu
CTC
[ENA]
¡û
Identical group No.746912 (2 seq.)
>W1711137365
LVBI01000007
Spirochaetota
Spirochaetales bacterium Spiro_07 [LVBI]
50655
50584
-
Glu
CTC
[ENA]
¡û
>W1610948485
LVBI01000007
Spirochaetota
Spirochaetales bacterium Spiro_07 [LVBI]
50655
50584
-
Glu
CTC
[ENA]
¡û
Identical group No.746919 (7 seq.)
>W1711137548
LVBN01000106
Spirochaetota
Spirochaetales bacterium Spiro_12 [LVBN]
3718
3789
+
Glu
CTC
[ENA]
¡û
>W1711422850
MIBM01000358
Spirochaetota
Spirochaetes bacterium RIFOXYC1_FULL_54_7 [MIBM]
3450
3521
+
Glu
CTC
[ENA]
¡û
>W1711629303
MPOU01000024
Unclassified
bacterium EBM-40 [MPOU]
70233
70162
-
Glu
CTC
[ENA]
¡û
>WENV181229736
OFEK01000039
[OFEK] activated sludge metagenome; Anaerobic digester
35063
34992
-
Glu
CTC
[ENA]
¡û
>WENV181311716
OFJB01009558
[OFJB] sludge metagenome; sludge
2469
2540
+
Glu
CTC
[ENA]
¡û
>WENV170641227
JFJP01035341
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
2225
2154
-
Glu
CTC
[ENA]
¡û
>W1610948668
LVBN01000106
Spirochaetota
Spirochaetales bacterium Spiro_12 [LVBN]
3718
3789
+
Glu
CTC
[ENA]
¡û
Identical group No.748299 (3 seq.)
>W1711524552
MLPZ01000012
Spirochaetota
Treponema sp. CETP13 [MLPZ]
195885
195961
+
Glu
CTC
[ENA]
¡û
>WENV170655058
JTFN01003188
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating
4693
4769
+
Glu
CTC
[ENA]
¡û
>WENV170656115
JTFO01000201
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
4511
4435
-
Glu
CTC
[ENA]
¡û
Identical group No.748687 (3 seq.)
>W1711421978
MIAN01000077
Spirochaetota
Spirochaetes bacterium GWB1_27_13 [MIAN]
16916
16989
+
Glu
CTC
[ENA]
¡û
>W1711422227
MIAT01000251
Spirochaetota
Spirochaetes bacterium GWC1_27_15 [MIAT]
19530
19603
+
Glu
CTC
[ENA]
¡û
>W1711422314
MIAW01000024
Spirochaetota
Spirochaetes bacterium GWD1_27_9 [MIAW]
10292
10219
-
Glu
CTC
[ENA]
¡û
Identical group No.749539 (132 seq.)
>W131000342
AGEB01000001
Spirochaetota
Treponema denticola US-Trep [AGEB]
36768
36841
+
Glu
CTC
[ENA]
¡û
>W131003059
AHAB01000007
Spirochaetota
Treponema denticola SP23 [AHAB]
45113
45186
+
Glu
CTC
[ENA]
¡û
>W131003078
AHAC01000010
Spirochaetota
Treponema denticola SP32 [AHAC]
470069
470142
+
Glu
CTC
[ENA]
¡û
>W131003125
AHAD01000004
Spirochaetota
Treponema denticola SP44 [AHAD]
183220
183147
-
Glu
CTC
[ENA]
¡û
>W1711137491
LVBL01000019
Spirochaetota
Spirochaetales bacterium Spiro_10 [LVBL]
66568
66641
+
Glu
CTC
[ENA]
¡û
>W131205808
ATFC01000009
Spirochaetota
Treponema vincentii F0403 [ATFC]
337952
338025
+
Glu
CTC
[ENA]
¡û
>W131205870
ATFE01000003
Spirochaetota
Treponema medium ATCC 700293 [ATFE]
131948
132021
+
Glu
CTC
[ENA]
¡û
>C025486
AE017226
Spirochaetota
Treponema denticola ATCC 35405 [AE017226]
2836822
2836893
+
Glu
CTC
[Ensembl]
¡û
>W141005337
AGDQ01000007
Spirochaetota
Treponema denticola AL-2 [AGDQ]
310961
310888
-
Glu
CTC
[ENA]
¡û
>W141005374
AGDR01000021
Spirochaetota
Treponema denticola ASLM [AGDR]
36812
36885
+
Glu
CTC
[ENA]
¡û
>W141005406
AGDS01000006
Spirochaetota
Treponema denticola ATCC 33520 [AGDS]
357181
357108
-
Glu
CTC
[ENA]
¡û
>W141005449
AGDT01000005
Spirochaetota
Treponema denticola ATCC 33521 [AGDT]
306732
306659
-
Glu
CTC
[ENA]
¡û
>W141005514
AGDU01000018
Spirochaetota
Treponema denticola ATCC 35404 [AGDU]
68257
68330
+
Glu
CTC
[ENA]
¡û
>W141005557
AGDV01000012
Spirochaetota
Treponema denticola H-22 [AGDV]
53968
54041
+
Glu
CTC
[ENA]
¡û
>W141005579
AGDW01000011
Spirochaetota
Treponema denticola H1-T [AGDW]
281693
281620
-
Glu
CTC
[ENA]
¡û
>W141005620
AGDX01000003
Spirochaetota
Treponema denticola MYR-T [AGDX]
350500
350427
-
Glu
CTC
[ENA]
¡û
>W141005681
AGDY01000005
Spirochaetota
Treponema denticola OTK [AGDY]
44612
44685
+
Glu
CTC
[ENA]
¡û
>W141005707
AGDZ01000018
Spirochaetota
Treponema denticola SP33 [AGDZ]
365999
365926
-
Glu
CTC
[ENA]
¡û
>W141005755
AGEA01000004
Spirochaetota
Treponema denticola SP37 [AGEA]
191587
191660
+
Glu
CTC
[ENA]
¡û
>WENV180709409
ODFJ01069544
[ODFJ] human metagenome; G_DNA_Tongue dorsum
235
162
-
Glu
CTC
[ENA]
¡û
>WENV180721451
ODGL01000642
[ODGL] human metagenome; G_DNA_Subgingival plaque
4555
4628
+
Glu
CTC
[ENA]
¡û
>WENV180721883
ODGL01022848
[ODGL] human metagenome; G_DNA_Subgingival plaque
72
145
+
Glu
CTC
[ENA]
¡û
>WENV180728705
ODGU01083083
[ODGU] human metagenome; G_DNA_Supragingival plaque
73
-1
-
Glu
CTC
[ENA]
¡û
>WENV180734160
ODGZ01003239
[ODGZ] human metagenome; G_DNA_Supragingival plaque
2387
2460
+
Glu
CTC
[ENA]
¡û
>WENV180750320
ODHS01001362
[ODHS] human metagenome; G_DNA_Supragingival plaque
6401
6476
+
Glu
CTC
[ENA]
¡û
>WENV180767760
ODIG01000638
[ODIG] human metagenome; G_DNA_Tongue dorsum
18642
18715
+
Glu
CTC
[ENA]
¡û
>WENV180789299
ODIS01419104
[ODIS] human metagenome; G_DNA_Supragingival plaque
75
2
-
Glu
CTC
[ENA]
¡û
>WENV180796232
ODJB01002208
[ODJB] human metagenome; G_DNA_Supragingival plaque
6505
6578
+
Glu
CTC
[ENA]
¡û
>WENV180809964
ODJK01080957
[ODJK] human metagenome; G_DNA_Subgingival plaque
507
434
-
Glu
CTC
[ENA]
¡û
>WENV180823836
ODJW01212196
[ODJW] human metagenome; G_DNA_Supragingival plaque
125
196
+
Glu
CTC
[ENA]
¡û
>WENV180843297
ODKN01001691
[ODKN] human metagenome; G_DNA_Supragingival plaque
575
648
+
Glu
CTC
[ENA]
¡û
>WENV180845672
ODKT01001499
[ODKT] human metagenome; G_DNA_Supragingival plaque
12184
12257
+
Glu
CTC
[ENA]
¡û
>WENV180853408
ODKW01100664
[ODKW] human metagenome; G_DNA_Tongue dorsum
246
173
-
Glu
CTC
[ENA]
¡û
>WENV180882986
ODMC01001209
[ODMC] human metagenome; G_DNA_Tongue dorsum
9719
9646
-
Glu
CTC
[ENA]
¡û
>WENV180897664
ODNI01052834
[ODNI] human metagenome; G_DNA_Tongue dorsum
135
208
+
Glu
CTC
[ENA]
¡û
>WENV180923348
ODTJ01131185
[ODTJ] human metagenome; G_DNA_Supragingival plaque
14
87
+
Glu
CTC
[ENA]
¡û
>WENV180924690
ODTK01011780
[ODTK] human metagenome; G_DNA_Supragingival plaque
875
802
-
Glu
CTC
[ENA]
¡û
>WENV180930982
ODTP01000918
[ODTP] human metagenome; G_DNA_Tongue dorsum
2657
2584
-
Glu
CTC
[ENA]
¡û
>WENV180931116
ODTP01001512
[ODTP] human metagenome; G_DNA_Tongue dorsum
9736
9663
-
Glu
CTC
[ENA]
¡û
>WENV180937949
ODTX01000271
[ODTX] human metagenome; G_DNA_Supragingival plaque
45393
45320
-
Glu
CTC
[ENA]
¡û
>WENV180944799
ODUC01036862
[ODUC] human metagenome; G_DNA_Supragingival plaque
899
972
+
Glu
CTC
[ENA]
¡û
>WENV180949596
ODUG01023760
[ODUG] human metagenome; G_DNA_Tongue dorsum
326
399
+
Glu
CTC
[ENA]
¡û
>WENV180951703
ODUH01043382
[ODUH] human metagenome; G_DNA_Subgingival plaque
829
756
-
Glu
CTC
[ENA]
¡û
>WENV180952382
ODUH01284927
[ODUH] human metagenome; G_DNA_Subgingival plaque
73
-1
-
Glu
CTC
[ENA]
¡û
>WENV180960515
ODUM01051026
[ODUM] human metagenome; G_DNA_Tongue dorsum
177
250
+
Glu
CTC
[ENA]
¡û
>WENV180968895
ODUT01108743
[ODUT] human metagenome; G_DNA_Tongue dorsum
230
157
-
Glu
CTC
[ENA]
¡û
>WENV180976543
ODUY01136849
[ODUY] human metagenome; G_DNA_Supragingival plaque
109
36
-
Glu
CTC
[ENA]
¡û
>WENV180980253
ODVE01000005
[ODVE] human metagenome; G_DNA_Supragingival plaque
285420
285347
-
Glu
CTC
[ENA]
¡û
>WENV180982363
ODVE01317050
[ODVE] human metagenome; G_DNA_Supragingival plaque
72
1
-
Glu
CTC
[ENA]
¡û
>WENV180986087
ODVJ01042294
[ODVJ] human metagenome; G_DNA_Tongue dorsum
499
426
-
Glu
CTC
[ENA]
¡û
>WENV181008827
ODWE01015265
[ODWE] human metagenome; G_DNA_Supragingival plaque
2481
2408
-
Glu
CTC
[ENA]
¡û
>WENV181038732
ODXQ01003976
[ODXQ] human metagenome; G_DNA_Tongue dorsum
5580
5653
+
Glu
CTC
[ENA]
¡û
>WENV181039020
ODXQ01008339
[ODXQ] human metagenome; G_DNA_Tongue dorsum
3767
3840
+
Glu
CTC
[ENA]
¡û
>WENV181044289
ODXV01005511
[ODXV] human metagenome; G_DNA_Tongue dorsum
4730
4657
-
Glu
CTC
[ENA]
¡û
>WENV181050770
ODYD01056136
[ODYD] human metagenome; G_DNA_Supragingival plaque
701
628
-
Glu
CTC
[ENA]
¡û
>WENV181062862
ODYO01068058
[ODYO] human metagenome; G_DNA_Palatine Tonsils
106
179
+
Glu
CTC
[ENA]
¡û
>WENV181067898
ODZI01069259
[ODZI] human metagenome; G_DNA_Supragingival plaque
450
524
+
Glu
CTC
[ENA]
¡û
>WENV181069606
ODZZ01111970
[ODZZ] human metagenome; G_DNA_Tongue dorsum
201
274
+
Glu
CTC
[ENA]
¡û
>WENV181073809
OEAO01001204
[OEAO] human metagenome; G_DNA_Tongue dorsum
9741
9668
-
Glu
CTC
[ENA]
¡û
>WENV181075738
OEAP01000236
[OEAP] human metagenome; G_DNA_Supragingival plaque
33800
33727
-
Glu
CTC
[ENA]
¡û
>WENV181078453
OEAS01000073
[OEAS] human metagenome; G_DNA_Supragingival plaque
60795
60867
+
Glu
CTC
[ENA]
¡û
>WENV181079001
OEAS01001321
[OEAS] human metagenome; G_DNA_Supragingival plaque
2544
2617
+
Glu
CTC
[ENA]
¡û
>WENV181080049
OEAS01024554
[OEAS] human metagenome; G_DNA_Supragingival plaque
70
143
+
Glu
CTC
[ENA]
¡û
>WENV181080165
OEAS01029802
[OEAS] human metagenome; G_DNA_Supragingival plaque
58
129
+
Glu
CTC
[ENA]
¡û
>WENV181080606
OEAS01060903
[OEAS] human metagenome; G_DNA_Supragingival plaque
1170
1097
-
Glu
CTC
[ENA]
¡û
>WENV181082068
OEAS01560545
[OEAS] human metagenome; G_DNA_Supragingival plaque
3
76
+
Glu
CTC
[ENA]
¡û
>WENV181084432
OEAV01229311
[OEAV] human metagenome; G_DNA_Supragingival plaque
110
39
-
Glu
CTC
[ENA]
¡û
>WENV181091344
OEBC01027002
[OEBC] human metagenome; G_DNA_Supragingival plaque
656
583
-
Glu
CTC
[ENA]
¡û
>WENV181094755
OEBY01000940
[OEBY] human metagenome; G_DNA_Tongue dorsum
15208
15281
+
Glu
CTC
[ENA]
¡û
>WENV181095594
OEBY01012997
[OEBY] human metagenome; G_DNA_Tongue dorsum
2108
2035
-
Glu
CTC
[ENA]
¡û
>WENV181102976
OECT01017472
[OECT] human metagenome; G_DNA_Tongue dorsum
904
831
-
Glu
CTC
[ENA]
¡û
>WENV181105247
OEED01002059
[OEED] human metagenome; G_DNA_Tongue dorsum
9734
9661
-
Glu
CTC
[ENA]
¡û
>WENV181113606
OEEL01049123
[OEEL] human metagenome; G_DNA_Tongue dorsum
313
386
+
Glu
CTC
[ENA]
¡û
>WENV181138944
OEGN01001751
[OEGN] human metagenome; G_DNA_Tongue dorsum
9730
9657
-
Glu
CTC
[ENA]
¡û
>WENV181151292
OEHW01034711
[OEHW] human metagenome; G_DNA_Tongue dorsum
37
110
+
Glu
CTC
[ENA]
¡û
>WENV181152798
OEIA01006548
[OEIA] human metagenome; G_DNA_Supragingival plaque
58
129
+
Glu
CTC
[ENA]
¡û
>WENV181153018
OEIA01015209
[OEIA] human metagenome; G_DNA_Supragingival plaque
1938
1867
-
Glu
CTC
[ENA]
¡û
>WENV181178813
OEJT01000301
[OEJT] human metagenome; G_DNA_Supragingival plaque
4928
5001
+
Glu
CTC
[ENA]
¡û
>WENV181182602
OEJV01021078
[OEJV] human metagenome; G_DNA_Supragingival plaque
163
90
-
Glu
CTC
[ENA]
¡û
>WENV183507958
OMGZ01002298
[OMGZ] human oral metagenome; human oral
371
443
+
Glu
CTC
[ENA]
¡û
>WENV183508025
OMHA01002020
[OMHA] human oral metagenome; human oral
576
503
-
Glu
CTC
[ENA]
¡û
>WENV183509154
OMHG01009300
[OMHG] human oral metagenome; human oral
162
235
+
Glu
CTC
[ENA]
¡û
>WENV183509767
OMHJ01010928
[OMHJ] human oral metagenome; human oral
37
108
+
Glu
CTC
[ENA]
¡û
>WENV183707818
PDWI01010863
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
4531
4457
-
Glu
CTC
[ENA]
¡û
>WENV183715394
PDWI01238375
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
503
576
+
Glu
CTC
[ENA]
¡û
>WENV183721823
PDWJ01089350
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
220
146
-
Glu
CTC
[ENA]
¡û
>WENV170686745
LFRM01161573
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
1108
1181
+
Glu
CTC
[ENA]
¡û
>C151045991
CP009227
Spirochaetota
Treponema sp. OMZ 838 [CP009227]
1507477
1507548
+
Glu
CTC
[Ensembl]
¡û
>C151046055
CP009228
Spirochaetota
Treponema putidum OMZ 758 [CP009228]
697097
697024
-
Glu
CTC
[Ensembl]
¡û
>W2011812638
UFQP01000001
Spirochaetota
Treponema denticola Marseille-5-CSURP7640 [UFQP]
231862
231789
-
Glu
CTC
[ENA]
¡û
>W2012082423
VLLD01000009
Spirochaetota
Treponema putidum ATCC 700334 [VLLD]
76754
76681
-
Glu
CTC
[ENA]
¡û
>C211033538
CP027017
Spirochaetota
Treponema medium T19 [CP027017]
347453
347524
+
Glu
CTC
-
¡û
>C211038686
CP031393
Spirochaetota
Treponema medium ATCC 700293 [CP031393]
345832
345905
+
Glu
CTC
-
¡û
>W10106164
ACYH01000037
Spirochaetota
Treponema vincentii ATCC 35580 [ACYH]
103630
103557
-
Glu
CTC
[ENA]
¡û
>C211083832
CP050497
Spirochaetota
Treponema sp. OMZ 806 [CP050497]
2528671
2528744
+
Glu
CTC
-
¡û
>C231045268
CP038800
Spirochaetota
Treponema denticola ATCC 700768 [CP038800]
81991
81918
-
Glu
CTC
-
¡û
>C231045311
CP038801
Spirochaetota
Treponema denticola ATCC 700771 [CP038801]
7601
7528
-
Glu
CTC
-
¡û
>C231045335
CP038802
Spirochaetota
Treponema putidum OMZ 847 [CP038802]
2361883
2361810
-
Glu
CTC
-
¡û
>C231045379
CP038803
Spirochaetota
Treponema putidum OMZ 846 [CP038803]
2335459
2335386
-
Glu
CTC
-
¡û
>C231045423
CP038804
Spirochaetota
Treponema putidum OMZ 835 [CP038804]
2168724
2168651
-
Glu
CTC
-
¡û
>C231061751
CP051147
Spirochaetota
Treponema sp. OMZ 857 [CP051147]
427004
427075
+
Glu
CTC
-
¡û
>C231061789
CP051148
Spirochaetota
Treponema vincentii OMZ 861 [CP051148]
444093
444166
+
Glu
CTC
-
¡û
>C231061838
CP051153
Spirochaetota
Treponema vincentii OMZ 862 [CP051153]
562216
562289
+
Glu
CTC
-
¡û
>C231061972
CP051194
Spirochaetota
Treponema sp. OMZ 855 [CP051194]
2197118
2197047
-
Glu
CTC
-
¡û
>C231061993
CP051195
Spirochaetota
Treponema sp. OMZ 803 BF2M [CP051195]
172839
172912
+
Glu
CTC
-
¡û
>C231062040
CP051196
Spirochaetota
Treponema sp. OMZ 906 [CP051196]
170013
170086
+
Glu
CTC
-
¡û
>C231062088
CP051197
Spirochaetota
Treponema vincentii OMZ 802 [CP051197]
494239
494312
+
Glu
CTC
-
¡û
>C231062158
CP051198
Spirochaetota
Treponema sp. OMZ 787 [CP051198]
2748539
2748612
+
Glu
CTC
-
¡û
>C231062219
CP051199
Spirochaetota
Treponema sp. OMZ 788 [CP051199]
9882
9809
-
Glu
CTC
-
¡û
>C231062262
CP051200
Spirochaetota
Treponema sp. OMZ 789 [CP051200]
11875
11802
-
Glu
CTC
-
¡û
>C231062305
CP051201
Spirochaetota
Treponema sp. OMZ 790 [CP051201]
11875
11802
-
Glu
CTC
-
¡û
>C231062349
CP051202
Spirochaetota
Treponema sp. OMZ 791 [CP051202]
11875
11802
-
Glu
CTC
-
¡û
>C231062392
CP051203
Spirochaetota
Treponema sp. OMZ 792 [CP051203]
10600
10527
-
Glu
CTC
-
¡û
>C231062443
CP051300
Spirochaetota
Treponema sp. OMZ 305 [CP051300]
2447450
2447523
+
Glu
CTC
-
¡û
>C231062495
CP051301
Spirochaetota
Treponema sp. OMZ 799 [CP051301]
3032576
3032649
+
Glu
CTC
-
¡û
>C231062552
CP051302
Spirochaetota
Treponema denticola OMZ 853 [CP051302]
8015
7942
-
Glu
CTC
-
¡û
>C231062595
CP051303
Spirochaetota
Treponema denticola OT2B [CP051303]
7957
7884
-
Glu
CTC
-
¡û
>C231062638
CP051304
Spirochaetota
Treponema denticola CD-1 [CP051304]
7956
7883
-
Glu
CTC
-
¡û
>C231062681
CP051305
Spirochaetota
Treponema sp. OMZ 798 [CP051305]
10600
10527
-
Glu
CTC
-
¡û
>C231062695
CP051522
Spirochaetota
Treponema denticola OMZ 910 [CP051522]
2720925
2720998
+
Glu
CTC
-
¡û
>C231062767
CP051523
Spirochaetota
Treponema denticola OMZ 852 [CP051523]
7958
7885
-
Glu
CTC
-
¡û
>C231062969
CP051633
Spirochaetota
Treponema denticola OMZ 898 [CP051633]
7956
7883
-
Glu
CTC
-
¡û
>C231063012
CP051634
Spirochaetota
Treponema denticola OMZ 850 [CP051634]
7958
7885
-
Glu
CTC
-
¡û
>C231063055
CP051635
Spirochaetota
Treponema denticola OMZ 905 [CP051635]
8866
8793
-
Glu
CTC
-
¡û
>C231070475
CP054477
Spirochaetota
Treponema denticola OMZ 823 [CP054477]
8866
8793
-
Glu
CTC
-
¡û
>C231078262
CP058347
Spirochaetota
Treponema denticola OKA3 [CP058347]
7958
7885
-
Glu
CTC
-
¡û
>C231078607
CP058624
Spirochaetota
Treponema denticola OMZ 854 [CP058624]
7955
7882
-
Glu
CTC
-
¡û
>C231078683
CP058668
Spirochaetota
Treponema sp. B152 [CP058668]
7957
7884
-
Glu
CTC
-
¡û
>C231519370
CP109619
Spirochaetota
Treponema denticola KCOM 3500 [CP109619]
151778
151705
-
Glu
CTC
-
¡û
>W11108487
ACYH01000037
Spirochaetota
Treponema vincentii ATCC 35580 [ACYH]
103630
103557
-
Glu
CTC
[ENA]
¡û
>W11115125
ADEC01000011
Spirochaetota
Treponema denticola F0402 [ADEC]
267192
267119
-
Glu
CTC
[ENA]
¡û
>W1610948611
LVBL01000019
Spirochaetota
Spirochaetales bacterium Spiro_10 [LVBL]
66568
66641
+
Glu
CTC
[ENA]
¡û
Identical group No.752204 (14 seq.)
>W141064687
AQCF01000034
Spirochaetota
Treponema phagedenis 4A [AQCF]
257553
257624
+
Glu
CTC
[ENA]
¡û
>WENV181091435
OEBC01033807
[OEBC] human metagenome; G_DNA_Supragingival plaque
1267
1196
-
Glu
CTC
[ENA]
¡û
>W2010610752
JABRPI010000001
Spirochaetota
Treponema phagedenis KS1 [JABRPI]
1234661
1234590
-
Glu
CTC
[ENA]
¡û
>W2012106415
VOQA01000001
Spirochaetota
Treponema phagedenis ATCC 27087 [VOQA]
705537
705466
-
Glu
CTC
[ENA]
¡û
>C211033607
CP027018
Spirochaetota
Treponema phagedenis T320A [CP027018]
2862509
2862580
+
Glu
CTC
-
¡û
>C211038762
CP031394
Spirochaetota
Treponema phagedenis Reiter [CP031394]
2545684
2545755
+
Glu
CTC
-
¡û
>W1510074562
CDNC01000049
Spirochaetota
Treponema phagedenis V1 [CDNC]
69360
69431
+
Glu
CTC
[ENA]
¡û
>C241068682
CP042813
Spirochaetota
Treponema phagedenis S11.1 [CP042813]
2516349
2516278
-
Glu
CTC
-
¡û
>C241068728
CP042815
Spirochaetota
Treponema phagedenis S2.3 [CP042815]
2491158
2491087
-
Glu
CTC
-
¡û
>C241068765
CP042816
Spirochaetota
Treponema phagedenis B31.4 [CP042816]
2487939
2487868
-
Glu
CTC
-
¡û
>C241068820
CP042817
Spirochaetota
Treponema phagedenis B36.5 [CP042817]
2810920
2810849
-
Glu
CTC
-
¡û
>C241068837
CP042818
Spirochaetota
Treponema phagedenis B43.1 [CP042818]
983687
983758
+
Glu
CTC
-
¡û
>C241168165
CP054692
Spirochaetota
Treponema phagedenis KS1 [CP054692]
945185
945256
+
Glu
CTC
-
¡û
>W11135672
AEFH01000181
Spirochaetota
Treponema phagedenis F0421 [AEFH]
26303
26232
-
Glu
CTC
[ENA]
¡û
Identical group No.752421 (7 seq.)
>WENV180598049
OCPL01154052
[OCPL] human gut metagenome; ENVO:feces
121
49
-
Glu
CTC
[ENA]
¡û
>WENV183640060
OQVL01000965
[OQVL] human gut metagenome; human gut
11964
12036
+
Glu
CTC
[ENA]
¡û
>WENV183644882
OQVQ01000151
[OQVQ] human gut metagenome; human gut
5842
5770
-
Glu
CTC
[ENA]
¡û
>WENV183649877
OQVT01006632
[OQVT] human gut metagenome; human gut
6536
6464
-
Glu
CTC
[ENA]
¡û
>WENV183651713
OQVU01002724
[OQVU] human gut metagenome; human gut
6474
6546
+
Glu
CTC
[ENA]
¡û
>WENV183653848
OQWA01001749
[OQWA] human gut metagenome; human gut
1291
1219
-
Glu
CTC
[ENA]
¡û
>C211195807
CP064936
Spirochaetota
Treponema sp. RCC2812 [CP064936]
1140649
1140577
-
Glu
CTC
-
¡û
Identical group No.752941 (2 seq.)
>WENV183704606
PDWI01000398
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
37429
37502
+
Glu
CTC
[ENA]
¡û
>C231194522
CP084606
Spirochaetota
Brucepastera parasyntrophica RmG11 [CP084606]
854120
854049
-
Glu
CTC
-
¡û
Identical group No.753638 (1 seq.)
>C241127258
CP048020
Spirochaetota
Treponema vincentii OMZ 804 [CP048020]
157102
157175
+
Glu
CTC
-
¡û
Identical group No.754829 (1 seq.)
>C11119670
CP002868
Spirochaetota
Gracilinema caldarium DSM 7334 [CP002868]
859340
859413
+
Glu
CTC
[Ensembl]
¡û
Identical group No.757926 (26 seq.)
>W131205851
ATFD01000014
Spirochaetota
Treponema socranskii subsp. paredis ATCC 35535 [ATFD]
226570
226641
+
Glu
CTC
[ENA]
¡û
>WENV180721700
ODGL01006558
[ODGL] human metagenome; G_DNA_Subgingival plaque
40
111
+
Glu
CTC
[ENA]
¡û
>WENV180728257
ODGU01033993
[ODGU] human metagenome; G_DNA_Supragingival plaque
46
117
+
Glu
CTC
[ENA]
¡û
>WENV180734825
ODGZ01026975
[ODGZ] human metagenome; G_DNA_Supragingival plaque
68
139
+
Glu
CTC
[ENA]
¡û
>WENV180750665
ODHS01005329
[ODHS] human metagenome; G_DNA_Supragingival plaque
1239
1310
+
Glu
CTC
[ENA]
¡û
>WENV180765210
ODIB01041526
[ODIB] human metagenome; G_DNA_Supragingival plaque
364
293
-
Glu
CTC
[ENA]
¡û
>WENV180788490
ODIS01067326
[ODIS] human metagenome; G_DNA_Supragingival plaque
666
595
-
Glu
CTC
[ENA]
¡û
>WENV180797085
ODJB01028549
[ODJB] human metagenome; G_DNA_Supragingival plaque
1099
1028
-
Glu
CTC
[ENA]
¡û
>WENV180809420
ODJK01016367
[ODJK] human metagenome; G_DNA_Subgingival plaque
1770
1699
-
Glu
CTC
[ENA]
¡û
>WENV180884317
ODMC01080330
[ODMC] human metagenome; G_DNA_Tongue dorsum
284
213
-
Glu
CTC
[ENA]
¡û
>WENV180923206
ODTJ01067439
[ODTJ] human metagenome; G_DNA_Supragingival plaque
387
458
+
Glu
CTC
[ENA]
¡û
>W141091819
AUZJ01000043
Spirochaetota
Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AUZJ]
98272
98201
-
Glu
CTC
[ENA]
¡û
>WENV180944468
ODUC01018569
[ODUC] human metagenome; G_DNA_Supragingival plaque
2524
2453
-
Glu
CTC
[ENA]
¡û
>WENV180950346
ODUG01192662
[ODUG] human metagenome; G_DNA_Tongue dorsum
10
81
+
Glu
CTC
[ENA]
¡û
>WENV180974962
ODUY01000336
[ODUY] human metagenome; G_DNA_Supragingival plaque
16301
16372
+
Glu
CTC
[ENA]
¡û
>WENV180975680
ODUY01015495
[ODUY] human metagenome; G_DNA_Supragingival plaque
1965
2036
+
Glu
CTC
[ENA]
¡û
>WENV180981024
ODVE01005390
[ODVE] human metagenome; G_DNA_Supragingival plaque
2093
2164
+
Glu
CTC
[ENA]
¡û
>WENV181076673
OEAP01010148
[OEAP] human metagenome; G_DNA_Supragingival plaque
3785
3714
-
Glu
CTC
[ENA]
¡û
>WENV181080375
OEAS01043783
[OEAS] human metagenome; G_DNA_Supragingival plaque
1484
1413
-
Glu
CTC
[ENA]
¡û
>WENV181084044
OEAV01052961
[OEAV] human metagenome; G_DNA_Supragingival plaque
38
109
+
Glu
CTC
[ENA]
¡û
>W141107071
AVQI01000028
Spirochaetota
Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 [AVQI]
54212
54283
+
Glu
CTC
[ENA]
¡û
>WENV181179747
OEJT01015399
[OEJT] human metagenome; G_DNA_Supragingival plaque
224
295
+
Glu
CTC
[ENA]
¡û
>W2110250940
JACSET010000006
Spirochaetota
Treponema sp. Marseille-Q4130 [JACSET]
45772
45843
+
Glu
CTC
[ENA]
¡û
>W2110492783
JAFEVM010000006
Spirochaetota
Treponema sp. Marseille-Q4523 [JAFEVM]
5406
5477
+
Glu
CTC
[ENA]
¡û
>C201314827
LR796240
Spirochaetota
Treponema socranskii subsp. buccale Marseille-CSURQ0203 [LR796240]
513774
513703
-
Glu
CTC
-
¡û
>C231070080
CP054258
Spirochaetota
Treponema socranskii subsp. buccale ATCC 35534 [CP054258]
760655
760584
-
Glu
CTC
-
¡û
Identical group No.759310 (17 seq.)
>W131205943
ATFF01000006
Spirochaetota
Treponema maltophilum ATCC 51939 [ATFF]
1213331
1213260
-
Glu
CTC
[ENA]
¡û
>WENV180721808
ODGL01015125
[ODGL] human metagenome; G_DNA_Subgingival plaque
654
727
+
Glu
CTC
[ENA]
¡û
>WENV180728193
ODGU01030544
[ODGU] human metagenome; G_DNA_Supragingival plaque
937
866
-
Glu
CTC
[ENA]
¡û
>WENV180751362
ODHS01046281
[ODHS] human metagenome; G_DNA_Supragingival plaque
14
87
+
Glu
CTC
[ENA]
¡û
>WENV180797779
ODJB01118230
[ODJB] human metagenome; G_DNA_Supragingival plaque
118
189
+
Glu
CTC
[ENA]
¡û
>WENV180809177
ODJK01006387
[ODJK] human metagenome; G_DNA_Subgingival plaque
2295
2368
+
Glu
CTC
[ENA]
¡û
>WENV180824826
ODJX01060644
[ODJX] human metagenome; G_DNA_Supragingival plaque
282
211
-
Glu
CTC
[ENA]
¡û
>WENV180939767
ODTX01085673
[ODTX] human metagenome; G_DNA_Supragingival plaque
518
447
-
Glu
CTC
[ENA]
¡û
>WENV180944309
ODUC01013187
[ODUC] human metagenome; G_DNA_Supragingival plaque
3168
3097
-
Glu
CTC
[ENA]
¡û
>WENV180951225
ODUH01013305
[ODUH] human metagenome; G_DNA_Subgingival plaque
1778
1851
+
Glu
CTC
[ENA]
¡û
>WENV180976717
ODUY01209725
[ODUY] human metagenome; G_DNA_Supragingival plaque
229
300
+
Glu
CTC
[ENA]
¡û
>WENV181076000
OEAP01001134
[OEAP] human metagenome; G_DNA_Supragingival plaque
14615
14542
-
Glu
CTC
[ENA]
¡û
>WENV181080630
OEAS01063696
[OEAS] human metagenome; G_DNA_Supragingival plaque
290
219
-
Glu
CTC
[ENA]
¡û
>WENV181153473
OEIA01094082
[OEIA] human metagenome; G_DNA_Supragingival plaque
404
331
-
Glu
CTC
[ENA]
¡û
>WENV181179352
OEJT01003655
[OEJT] human metagenome; G_DNA_Supragingival plaque
4423
4496
+
Glu
CTC
[ENA]
¡û
>W141146185
AWVH01000033
Spirochaetota
Treponema lecithinolyticum ATCC 700332 [AWVH]
34298
34371
+
Glu
CTC
[ENA]
¡û
>WENV183510939
OMHT01004010
[OMHT] human oral metagenome; human oral
126
199
+
Glu
CTC
[ENA]
¡û
Identical group No.762137 (3 seq.)
>W1711422287
MIAV01000023
Spirochaetota
Spirochaetes bacterium GWC2_52_13 [MIAV]
1952
2023
+
Pseudo
CTC
[ENA]
¡û
>WENV181231352
OFEK01021343
[OFEK] activated sludge metagenome; Anaerobic digester
215
289
+
Glu
CTC
[ENA]
¡û
>WENV170723334
LSQX01264836
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
1475
1402
-
Glu
CTC
[ENA]
¡û
Identical group No.767755 (1 seq.)
>W2011952149
UWYT01000278
Spirochaetota
Olavius algarvensis spirochete endosymbiont [UWYT]
16391
16462
+
Glu
CTC
[ENA]
¡û
Identical group No.768123 (3 seq.)
>WENV180036705
FVAA010273573
[FVAA] soil metagenome; Soil
106
35
-
Glu
CTC
[ENA]
¡û
>WENV170007561
AMWB02139375
[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
2257
2331
+
Glu
CTC
[ENA]
¡û
>W2012317497
WESA01000018
Spirochaetota
Rectinema sp. SURF-ANA-1 [WESA]
9487
9558
+
Glu
CTC
[ENA]
¡û
Identical group No.772220 (9 seq.)
>WENV180339549
OBLI01005620
[OBLI] pig gut metagenome; faeces
6069
6140
+
Glu
CTC
[ENA]
¡û
>WENV182524596
OIWT01000369
[OIWT] human gut metagenome; faeces
10929
10858
-
Glu
CTC
[ENA]
¡û
>WENV182528227
OIWU01002158
[OIWU] human gut metagenome; faeces
10929
10858
-
Glu
CTC
[ENA]
¡û
>WENV183045119
OLGE01005360
[OLGE] human gut metagenome; faeces
6380
6451
+
Glu
CTC
[ENA]
¡û
>WENV183640647
OQVL01007891
[OQVL] human gut metagenome; human gut
5499
5570
+
Glu
CTC
[ENA]
¡û
>WENV183642174
OQVN01000121
[OQVN] human gut metagenome; human gut
24373
24302
-
Glu
CTC
[ENA]
¡û
>WENV183646322
OQVR01001375
[OQVR] human gut metagenome; human gut
2258
2187
-
Glu
CTC
[ENA]
¡û
>WENV183657986
OQWM01000026
[OQWM] human gut metagenome; human gut
17500
17429
-
Glu
CTC
[ENA]
¡û
>C11123114
CP002631
Spirochaetota
Treponema succinifaciens DSM 2489 [CP002631]
1628133
1628062
-
Glu
CTC
[Ensembl]
¡û
Identical group No.785377 (1 seq.)
>W1730028922
MIAQ01000234
Spirochaetota
Spirochaetes bacterium GWB1_59_5 [MIAQ]
21033
20959
-
Glu
CTC
[ENA]
¡û
Identical group No.785558 (4 seq.)
>W131168543
AREC01000019
Spirochaetota
Alkalispirochaeta alkalica DSM 8900 [AREC]
53952
54026
+
Glu
CTC
[ENA]
¡û
>W1910636843
LPWH01000001
Spirochaetota
Alkalispirochaeta sphaeroplastigenens JC133 [LPWH]
53637
53708
+
Glu
CTC
[ENA]
¡û
>W2010784180
LPWH01000001
Spirochaetota
Alkalispirochaeta sphaeroplastigenens JC133 [LPWH]
53637
53708
+
Glu
CTC
[ENA]
¡û
>W1710596630
FTMS01000003
Spirochaetota
Alkalispirochaeta americana [FTMS]
211181
211255
+
Glu
CTC
[ENA]
¡û
Identical group No.789903 (4 seq.)
>W1711137294
LVBF01000068
Spirochaetota
Spirochaetales bacterium Spiro_04 [LVBF]
2175
2101
-
Glu
CTC
[ENA]
¡û
>WENV180095428
MTBK01067616
[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
1509
1438
-
Glu
CTC
[ENA]
¡û
>WENV170719919
LSQX01133766
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
6282
6356
+
Glu
CTC
[ENA]
¡û
>W1610948414
LVBF01000068
Spirochaetota
Spirochaetales bacterium Spiro_04 [LVBF]
2175
2101
-
Glu
CTC
[ENA]
¡û
Identical group No.794933 (4 seq.)
>W2010568547
JAATLL010000002
Spirochaetota
Spirochaetales bacterium BR151 [JAATLL]
208852
208926
+
Glu
CTC
[ENA]
¡û
>W2010568585
JAATLM010000001
Spirochaetota
Spirochaetales bacterium BR149 [JAATLM]
404700
404774
+
Glu
CTC
[ENA]
¡û
>C231610212
CP118181
Spirochaetota
Entomospira culicis BR151 [CP118181]
402284
402358
+
Glu
CTC
-
¡û
>C231610253
CP118185
Spirochaetota
Entomospira culicis BR149 [CP118185]
404700
404774
+
Glu
CTC
-
¡û
Identical group No.797330 (2 seq.)
>W1711422185
MIAS01000178
Spirochaetota
Spirochaetes bacterium GWB1_66_5 [MIAS]
370
297
-
Glu
CTC
[ENA]
¡û
>W1711422791
MIBK01000116
Spirochaetota
Spirochaetes bacterium RBG_16_67_19 [MIBK]
14228
14301
+
Glu
CTC
[ENA]
¡û
Identical group No.797339 (2 seq.)
>W1711423873
MIDL01000164
Spirochaetota
Treponema sp. GWB1_62_6 [MIDL]
2001
2072
+
Glu
CTC
[ENA]
¡û
>W1711423959
MIDN01000259
Spirochaetota
Treponema sp. RIFOXYC1_FULL_61_9 [MIDN]
32652
32581
-
Glu
CTC
[ENA]
¡û
Identical group No.797927 (2 seq.)
>C211235911
CP067089
Spirochaetota
Breznakiella homolactica RmG30 [CP067089]
4461865
4461936
+
Glu
CTC
-
¡û
>W11134606
AEEA01000050
Spirochaetota
Treponema primitia ZAS-1 [AEEA]
183852
183781
-
Glu
CTC
[ENA]
¡û
Identical group No.800706 (2 seq.)
>C11122378
CP001841
Spirochaetota
Leadbettera azotonutricia ZAS-9 [CP001841]
2711240
2711311
+
Glu
CTC
[Ensembl]
¡û
>C11122985
CP001843
Spirochaetota
Treponema primitia ZAS-2 [CP001843]
722354
722283
-
Glu
CTC
[Ensembl]
¡û
Identical group No.800758 (3 seq.)
>C10112759
CP001698
Spirochaetota
Spirochaeta thermophila DSM 6192 [CP001698]
819701
819774
+
Glu
CTC
[Ensembl]
¡û
>C11122017
CP002903
Spirochaetota
Spirochaeta thermophila DSM 6578 [CP002903]
1603976
1603903
-
Glu
CTC
[Ensembl]
¡û
>W11141837
AEOG01000014
Spirochaetota
Spirochaeta thermophila DSM 6578 [AEOG]
4817
4744
-
Glu
CTC
[ENA]
¡û
Identical group No.805280 (3 seq.)
>WENV180343485
OBLK01024840
[OBLK] soil metagenome; Clay
420
347
-
Glu
CTC
[ENA]
¡û
>WENV181296248
OFHJ01017385
[OFHJ] soil metagenome; Clay
480
553
+
Glu
CTC
[ENA]
¡û
>C10112576
CP002116
Spirochaetota
Sediminispirochaeta smaragdinae DSM 11293 [CP002116]
1946907
1946980
+
Glu
CTC
[Ensembl]
¡û
Identical group No.808454 (1 seq.)
>W2012156101
VUNN01000017
Spirochaetota
Spirochaetales bacterium NM-380-WT-3C1 [VUNN]
38169
38095
-
Glu
CTC
[ENA]
¡û
Identical group No.809015 (3 seq.)
>W1510014374
BBPV01000004
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. C1 [BBPV]
10070
10145
+
Glu
CTC
[ENA]
¡û
>W1510014444
BBPX01000141
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. D2 [BBPX]
1564
1639
+
Glu
CTC
[ENA]
¡û
>W1510014473
BBPY01000006
Spirochaetota
Treponema endosymbiont of Eucomonympha sp. of Eucomonympha sp. E12 [BBPY]
4377
4452
+
Glu
CTC
[ENA]
¡û
Identical group No.812374 (5 seq.)
>W1711796907
MWQY01000003
Spirochaetota
Marispirochaeta aestuarii sp. JC444 [MWQY]
50506
50433
-
Glu
CTC
[ENA]
¡û
>WENV183712742
PDWI01112068
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1977
1904
-
Glu
CTC
[ENA]
¡û
>WENV183712770
PDWI01113162
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1963
1890
-
Glu
CTC
[ENA]
¡û
>WENV183719097
PDWJ01009618
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
5909
5836
-
Glu
CTC
[ENA]
¡û
>W1710652157
JWTM01000532
Spirochaetota
Candidatus Marispirochaeta associata [JWTM]
257322
257396
+
Glu
CTC
[ENA]
¡û
Identical group No.828720 (2 seq.)
>W2010568468
JAATLJ010000001
Spirochaetota
Spirochaetales bacterium BR193 [JAATLJ]
918578
918649
+
Glu
CTC
[ENA]
¡û
>W2010568531
JAATLK010000001
Spirochaetota
Spirochaetales bacterium BR208 [JAATLK]
524548
524477
-
Glu
CTC
[ENA]
¡û
Identical group No.829760 (2 seq.)
>W1711137257
LVBD01000068
Spirochaetota
Spirochaetales bacterium Spiro_02 [LVBD]
73093
73164
+
Glu
CTC
[ENA]
¡û
>W1610948377
LVBD01000068
Spirochaetota
Spirochaetales bacterium Spiro_02 [LVBD]
73093
73164
+
Glu
CTC
[ENA]
¡û
Identical group No.829762 (2 seq.)
>W1711137441
LVBK01000006
Spirochaetota
Spirochaetales bacterium Spiro_09 [LVBK]
32384
32457
+
Glu
CTC
[ENA]
¡û
>W1610948561
LVBK01000006
Spirochaetota
Spirochaetales bacterium Spiro_09 [LVBK]
32384
32457
+
Glu
CTC
[ENA]
¡û
Identical group No.832648 (2 seq.)
>C241192382
CP097901
Spirochaetota
Treponema paraluiscuniculi L2 [CP097901]
125027
125100
+
Glu
CTC
-
¡û
>C11122887
CP002103
Spirochaetota
Treponema paraluiscuniculi Cuniculi A [CP002103]
125031
125104
+
Glu
CTC
[Ensembl]
¡û
Identical group No.856545 (1 seq.)
>C11119859
CP002659
Spirochaetota
Parasphaerochaeta coccoides DSM 17374 [CP002659]
723196
723123
-
Glu
CTC
[Ensembl]
¡û
Identical group No.857592 (1 seq.)
>W131176130
ARJU01000070
Spirochaetota
Sediminispirochaeta bajacaliforniensis DSM 16054 [ARJU]
36547
36620
+
Pseudo
CTC
[ENA]
¡û
Identical group No.861604 (1 seq.)
>W2310011504
BNUR01000014
Spirochaetota
Spirochaetia bacterium MS495-2 [BNUR]
15980
16051
+
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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