tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = CCC

HIT: 14 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.461173 (22 seq.)
>W131157322 AQRZ01000036 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 11555 11480 - Gly CCC [ENA] ¡û
>WENV180346855 OBLN01355226 [OBLN] sediment metagenome; sediment 234 159 - Gly CCC [ENA] ¢þ
>WENV181230669 OFEK01002237 [OFEK] activated sludge metagenome; Anaerobic digester 2262 2187 - Gly CCC [ENA] ¢þ
>WENV181312425 OFJB01113237 [OFJB] sludge metagenome; sludge 502 427 - Gly CCC [ENA] ¢þ
>WENV170676501 LDZS01000244 [LDZS] terrestrial metagenome; oil reservoir sample K3 6509 6434 - Gly CCC [ENA] ¢þ
>WENV170676905 LDZS01003181 [LDZS] terrestrial metagenome; oil reservoir sample K3 56390 56465 + Gly CCC [ENA] ¢þ
>WENV170678357 LDZT01014035 [LDZT] terrestrial metagenome; oil reservoir sample SB1 9062 8987 - Gly CCC [ENA] ¢þ
>WENV170678619 LDZU01003377 [LDZU] terrestrial metagenome; oil reservoir sample SB2 6077 6002 - Gly CCC [ENA] ¢þ
>WENV170967234 MTKW01000525 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 228319 228244 - Gly CCC [ENA] ¢þ
>WENV170971385 MTKX01004560 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 79004 78929 - Gly CCC [ENA] ¢þ
>WENV170976204 MTKZ01005715 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 22194 22269 + Gly CCC [ENA] ¢þ
>W09126614 ACJX01000145 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 4579 4504 - Gly CCC [ENA] ¡û
>C121008059 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 697609 697684 + Gly CCC [Ensembl] ¡û
>W121031637 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 878351 878426 + Gly CCC [ENA] ¡û
>W1610613273 LGFQ01000001 Synergistota Synergistales bacterium 54_24 [LGFQ] 56390 56465 + Gly CCC [ENA] ¡û
>W1610613709 LGGE01000028 Synergistota Synergistales bacterium 57_84 [LGGE] 9062 8987 - Gly CCC [ENA] ¡û
>W1610614157 LGGV01000002 Synergistota Synergistales bacterium 58_81 [LGGV] 6077 6002 - Gly CCC [ENA] ¡û
>W1710530813 FNPD01000001 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 296055 296130 + Gly CCC [ENA] ¡û
>W1710594088 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 376488 376413 - Gly CCC [ENA] ¡û
>W1710734480 LGFQ01000001 Synergistota Synergistales bacterium 54_24 [LGFQ] 56390 56465 + Gly CCC [ENA] ¡û
>W1710734862 LGGE01000028 Synergistota Synergistales bacterium 57_84 [LGGE] 9062 8987 - Gly CCC [ENA] ¡û
>W1710735240 LGGV01000002 Synergistota Synergistales bacterium 58_81 [LGGV] 6077 6002 - Gly CCC [ENA] ¡û
Identical group No.488003 (5 seq.)
>W1712039388 NFJQ01000011 Synergistota Cloacibacillus sp. An23 [NFJQ] 31630 31555 - Gly CCC [ENA] ¡û
>WENV180096748 MTBK01144849 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 192367 192292 - Gly CCC [ENA] ¢þ
>WENV183580394 OOCM01090359 [OOCM] human gut metagenome; human gut 110 35 - Gly CCC [ENA] ¢þ
>WENV183712384 PDWI01098104 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1276 1201 - Gly CCC [ENA] ¢þ
>WENV183716741 PDWJ01000160 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 1665 1590 - Gly CCC [ENA] ¢þ
Identical group No.490523 (10 seq.)
>W1711629546 MPPC01000006 Synergistota Aminobacterium sp. EBM-42 [MPPC] 44314 44389 + Gly CCC [ENA] ¡û
>WENV180096327 MTBK01123758 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 273 348 + Gly CCC [ENA] ¢þ
>W141279010 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 1334284 1334209 - Gly CCC [ENA] ¡û
>WENV170655222 JTFN01012656 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 38 113 + Gly CCC [ENA] ¢þ
>WENV170656560 JTFO01025071 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 1541 1616 + Gly CCC [ENA] ¢þ
>WENV170657067 JTFO01075884 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 311 386 + Gly CCC [ENA] ¢þ
>WENV170716609 LSQX01005233 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3489 3564 + Gly CCC [ENA] ¢þ
>WENV170725207 LSQX01334504 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 38184 38109 - Gly CCC [ENA] ¢þ
>C10100314 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 837835 837910 + Gly CCC [Ensembl] ¡û
>W1710608676 FXBB01000001 Synergistota Dethiosulfovibrio salsuginis [FXBB] 175779 175704 - Gly CCC [ENA] ¡û
Identical group No.491404 (19 seq.)
>C171050563 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1856162 1856087 - Gly CCC - ¡û
>WENV181614375 OGLV01054624 [OGLV] metagenome; Human gut stool 445 370 - Gly CCC [ENA] ¢þ
>WENV181637882 OGNB01077251 [OGNB] metagenome; Human gut stool 171 96 - Gly CCC [ENA] ¢þ
>WENV181908462 OGYB01000037 [OGYB] human gut metagenome; faeces 23319 23244 - Gly CCC [ENA] ¢þ
>WENV181910805 OGYC01064482 [OGYC] human gut metagenome; faeces 433 508 + Gly CCC [ENA] ¢þ
>WENV181914363 OGYF01000160 [OGYF] human gut metagenome; faeces 68418 68493 + Gly CCC [ENA] ¢þ
>WENV182031104 OHCS01002723 [OHCS] human gut metagenome; feces 1725 1800 + Gly CCC [ENA] ¢þ
>WENV182215769 OHQM01002127 [OHQM] human gut metagenome; feces 1559 1634 + Gly CCC [ENA] ¢þ
>WENV182883699 OKSB01026803 [OKSB] human gut metagenome; faeces 1146 1071 - Gly CCC [ENA] ¢þ
>WENV183039147 OLGB01003594 [OLGB] human gut metagenome; faeces 2016 1941 - Gly CCC [ENA] ¢þ
>WENV183484377 OMFO01027858 [OMFO] human gut metagenome; feces 380 305 - Gly CCC [ENA] ¢þ
>W141452049 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 451755 451680 - Gly CCC [ENA] ¡û
>W141701217 JMKI01000047 Synergistota Synergistes jonesii [JMKI] 83930 83855 - Gly CCC [ENA] ¡û
>W121000500 ACUH01000051 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 69934 69859 - Gly CCC [ENA] ¡û
>W1710629258 JPZQ01000056 Synergistota Synergistes jonesii [JPZQ] 83099 83024 - Gly CCC [ENA] ¡û
>W1710629308 JPZR01000047 Synergistota Synergistes jonesii [JPZR] 423 348 - Gly CCC [ENA] ¡û
>W1710629350 JPZS01000049 Synergistota Synergistes jonesii [JPZS] 56238 56163 - Gly CCC [ENA] ¡û
>W1710631827 JQEK01000023 Synergistota Synergistes jonesii [JQEK] 83102 83027 - Gly CCC [ENA] ¡û
>W1710631892 JQEL01000049 Synergistota Synergistes jonesii [JQEL] 83099 83024 - Gly CCC [ENA] ¡û
Identical group No.500378 (8 seq.)
>WENV180094833 MTBK01033955 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 133 208 + Gly CCC [ENA] ¢þ
>WENV183515015 OMKS01042409 [OMKS] sediment metagenome; hot spring sediment 1573 1648 + Gly CCC [ENA] ¢þ
>WENV170677171 LDZT01003318 [LDZT] terrestrial metagenome; oil reservoir sample SB1 147 222 + Gly CCC [ENA] ¢þ
>WENV170679055 LDZU01006810 [LDZU] terrestrial metagenome; oil reservoir sample SB2 12680 12605 - Gly CCC [ENA] ¢þ
>W1610613632 LGGB01000070 Synergistota Synergistales bacterium 53_16 [LGGB] 147 222 + Gly CCC [ENA] ¡û
>W1610614502 LGHG01000061 Synergistota Synergistales bacterium 54_9 [LGHG] 12680 12605 - Gly CCC [ENA] ¡û
>W1710734804 LGGB01000070 Synergistota Synergistales bacterium 53_16 [LGGB] 147 222 + Gly CCC [ENA] ¡û
>W1710735483 LGHG01000061 Synergistota Synergistales bacterium 54_9 [LGHG] 12680 12605 - Gly CCC [ENA] ¡û
Identical group No.518812 (9 seq.)
>WENV180094548 MTBK01014500 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 725 800 + Gly CCC [ENA] ¢þ
>WENV182621077 OJKI01048812 [OJKI] metagenome; faeces 426 351 - Gly CCC [ENA] ¢þ
>W141278982 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 826127 826052 - Gly CCC [ENA] ¡û
>WENV183518397 OMNQ01004160 [OMNQ] human gut metagenome; feces 3693 3768 + Gly CCC [ENA] ¢þ
>WENV183721243 PDWJ01060518 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 829 754 - Gly CCC [ENA] ¢þ
>WENV170040237 CDYS01024316 [CDYS] gut metagenome; human stools 43083 43008 - Gly CCC [ENA] ¢þ
>WENV170671744 LAHU01147386 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 520 445 - Gly CCC [ENA] ¢þ
>W11172512 AFSL01000074 Bacteroidota Thermophagus xiamenensis HS1 [AFSL] 68906 68979 + Gly CCC [ENA] ¡û
>W1710559939 FONA01000004 Bacteroidota Thermophagus xiamenensis [FONA] 160170 160243 + Gly CCC [ENA] ¡û
Identical group No.541210 (4 seq.)
>WENV181989192 OHAO01004268 [OHAO] human gut metagenome; faeces 125 50 - Gly CCC [ENA] ¢þ
>WENV183763885 PPYE01311176 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 49395 49470 + Gly CCC [ENA] ¢þ
>W10113043 ADFP01000116 Synergistota Pyramidobacter piscolens W5455 [ADFP] 7543 7618 + Gly CCC [ENA] ¡û
>W11116270 ADFP01000116 Synergistota Pyramidobacter piscolens W5455 [ADFP] 7543 7618 + Gly CCC [ENA] ¡û
Identical group No.541237 (1 seq.)
>W11300943 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 219423 219348 - Gly CCC [ENA] ¡û
Identical group No.553413 (3 seq.)
>W141146837 AWWC01000006 Synergistota Jonquetella sp. BV3C21 [AWWC] 43493 43568 + Gly CCC [ENA] ¡û
>W09132991 ACOO02000037 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 46849 46924 + Gly CCC [ENA] ¡û
>W121017471 AGRU01000001 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 146266 146341 + Gly CCC [ENA] ¡û
Identical group No.560599 (6 seq.)
>W1711137620 LVBQ01000037 Synergistota Synergistales bacterium Syner_03 [LVBQ] 97278 97203 - Gly CCC [ENA] ¡û
>WENV181080626 OEAS01063371 [OEAS] human metagenome; G_DNA_Supragingival plaque 1114 1039 - Gly CCC [ENA] ¢þ
>WENV170677175 LDZT01003441 [LDZT] terrestrial metagenome; oil reservoir sample SB1 2333 2258 - Gly CCC [ENA] ¢þ
>W1610613636 LGGB01000193 Synergistota Synergistales bacterium 53_16 [LGGB] 2333 2258 - Gly CCC [ENA] ¡û
>W1610948740 LVBQ01000037 Synergistota Synergistales bacterium Syner_03 [LVBQ] 97278 97203 - Gly CCC [ENA] ¡û
>W1710734808 LGGB01000193 Synergistota Synergistales bacterium 53_16 [LGGB] 2333 2258 - Gly CCC [ENA] ¡û
Identical group No.621937 (1 seq.)
>W09108924 ABTR01000003 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 214076 214001 - Gly CCC [ENA] ¡û
Identical group No.621938 (3 seq.)
>WENV181409417 OGCI01000159 [OGCI] hot springs metagenome; Hot spring water 27573 27498 - Gly CCC [ENA] ¢þ
>W09110145 ABUW01000004 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 87181 87256 + Gly CCC [ENA] ¡û
>C10112989 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 890803 890878 + Gly CCC [Ensembl] ¡û
Identical group No.640935 (1 seq.)
>W1711744486 MUHX01000004 Synergistota Pyramidobacter sp. C12-8 [MUHX] 33967 33892 - Gly CCC [ENA] ¡û
Identical group No.641273 (1 seq.)
>C121005689 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1017364 1017439 + Gly CCC [Ensembl] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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