tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = GAA

HIT: 16 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.461419 (15 seq.)
>WENV181230276 OFEK01000582 [OFEK] activated sludge metagenome; Anaerobic digester 25266 25341 + Phe GAA [ENA] ¢þ
>WENV183514099 OMKS01011869 [OMKS] sediment metagenome; hot spring sediment 4406 4331 - Phe GAA [ENA] ¢þ
>WENV170008228 AMZC01005281 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 1339 1414 + Phe GAA [ENA] ¢þ
>WENV170561536 CZCA01012879 [CZCA] anaerobic digester metagenome; anaerobic digester 1196 1271 + Phe GAA [ENA] ¢þ
>WENV170562825 CZCB01005732 [CZCB] anaerobic digester metagenome; anaerobic digester 1196 1271 + Phe GAA [ENA] ¢þ
>WENV170685654 LFRM01103005 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 702 627 - Phe GAA [ENA] ¢þ
>WENV170968341 MTKW01008389 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 341 266 - Phe GAA [ENA] ¢þ
>WENV170968677 MTKW01012995 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 390 315 - Phe GAA [ENA] ¢þ
>WENV170972401 MTKX01029124 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 21165 21240 + Phe GAA [ENA] ¢þ
>WENV170974160 MTKY01054733 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 19331 19406 + Phe GAA [ENA] ¢þ
>WENV170976294 MTKZ01006422 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 135546 135621 + Phe GAA [ENA] ¢þ
>W09126629 ACJX01000176 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 15024 14949 - Phe GAA [ENA] ¡û
>C121008048 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 216920 216995 + Phe GAA [Ensembl] ¡û
>W1710530851 FNPD01000014 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 32595 32520 - Phe GAA [ENA] ¡û
>W1710594077 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 854810 854735 - Phe GAA [ENA] ¡û
Identical group No.466933 (27 seq.)
>W1711137613 LVBQ01000027 Synergistota Synergistales bacterium Syner_03 [LVBQ] 30797 30872 + Phe GAA [ENA] ¡û
>W1712039355 NFJQ01000002 Synergistota Cloacibacillus sp. An23 [NFJQ] 128320 128395 + Phe GAA [ENA] ¡û
>C171050539 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1584216 1584291 + Phe GAA - ¡û
>C171050541 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1584524 1584599 + Phe GAA - ¡û
>WENV180221152 OBAX01054985 [OBAX] human gut metagenome; human gut 10 85 + Phe GAA [ENA] ¢þ
>WENV180223826 OBBH01039254 [OBBH] human gut metagenome; human gut 142 217 + Phe GAA [ENA] ¢þ
>WENV180224020 OBBI01024341 [OBBI] human gut metagenome; human gut 194 269 + Phe GAA [ENA] ¢þ
>WENV180240651 OBDD01041448 [OBDD] human gut metagenome; human gut 184 259 + Phe GAA [ENA] ¢þ
>WENV180246686 OBDP01043695 [OBDP] human gut metagenome; human gut 117 42 - Phe GAA [ENA] ¢þ
>WENV180274733 OBHE01025304 [OBHE] human gut metagenome; human gut 257 182 - Phe GAA [ENA] ¢þ
>WENV180544256 OCIP01028414 [OCIP] human gut metagenome; human gut 288 363 + Phe GAA [ENA] ¢þ
>WENV180544556 OCIQ01033797 [OCIQ] human gut metagenome; human gut 126 201 + Phe GAA [ENA] ¢þ
>WENV180545467 OCIT01025001 [OCIT] human gut metagenome; human gut 215 290 + Phe GAA [ENA] ¢þ
>WENV181908446 OGYB01000027 [OGYB] human gut metagenome; faeces 135939 135864 - Phe GAA [ENA] ¢þ
>WENV181915170 OGYF01003639 [OGYF] human gut metagenome; faeces 9274 9349 + Phe GAA [ENA] ¢þ
>WENV181915172 OGYF01003639 [OGYF] human gut metagenome; faeces 9584 9659 + Phe GAA [ENA] ¢þ
>WENV182006066 OHBE01064678 [OHBE] human gut metagenome; faeces 574 499 - Phe GAA [ENA] ¢þ
>WENV182031200 OHCS01005330 [OHCS] human gut metagenome; feces 3201 3126 - Phe GAA [ENA] ¢þ
>WENV182172672 OHMY01029824 [OHMY] human gut metagenome; feces 65 140 + Phe GAA [ENA] ¢þ
>WENV182180632 OHNO01004625 [OHNO] human gut metagenome; feces 3600 3525 - Phe GAA [ENA] ¢þ
>WENV182216034 OHQM01013743 [OHQM] human gut metagenome; feces 1032 957 - Phe GAA [ENA] ¢þ
>WENV182537978 OIXH01028019 [OIXH] human gut metagenome; faeces 1878 1953 + Phe GAA [ENA] ¢þ
>WENV183039652 OLGB01011383 [OLGB] human gut metagenome; faeces 2662 2587 - Phe GAA [ENA] ¢þ
>W141452028 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 209234 209309 + Phe GAA [ENA] ¡û
>W121000484 ACUH01000050 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 10306 10381 + Phe GAA [ENA] ¡û
>W121000486 ACUH01000050 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 10617 10692 + Phe GAA [ENA] ¡û
>W1610948733 LVBQ01000027 Synergistota Synergistales bacterium Syner_03 [LVBQ] 30797 30872 + Phe GAA [ENA] ¡û
Identical group No.490520 (2 seq.)
>W1711629538 MPPC01000004 Synergistota Aminobacterium sp. EBM-42 [MPPC] 80671 80596 - Phe GAA [ENA] ¡û
>C10100298 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 337231 337306 + Phe GAA [Ensembl] ¡û
Identical group No.491397 (7 seq.)
>W141701185 JMKI01000002 Synergistota Synergistes jonesii [JMKI] 14702 14777 + Phe GAA [ENA] ¡û
>W121031612 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 297231 297306 + Phe GAA [ENA] ¡û
>W1710629228 JPZQ01000001 Synergistota Synergistes jonesii [JPZQ] 12659 12734 + Phe GAA [ENA] ¡û
>W1710629271 JPZR01000001 Synergistota Synergistes jonesii [JPZR] 12659 12734 + Phe GAA [ENA] ¡û
>W1710629314 JPZS01000001 Synergistota Synergistes jonesii [JPZS] 12659 12734 + Phe GAA [ENA] ¡û
>W1710631854 JQEK01000047 Synergistota Synergistes jonesii [JQEK] 172166 172091 - Phe GAA [ENA] ¡û
>W1710631862 JQEL01000001 Synergistota Synergistes jonesii [JQEL] 12659 12734 + Phe GAA [ENA] ¡û
Identical group No.495398 (10 seq.)
>W1711137579 LVBO01000648 Synergistota Synergistales bacterium Syner_01 [LVBO] 1598 1673 + Phe GAA [ENA] ¡û
>WENV180731896 ODGW01031308 [ODGW] human metagenome; G_DNA_Supragingival plaque 156 81 - Phe GAA [ENA] ¢þ
>WENV180735334 ODGZ01160172 [ODGZ] human metagenome; G_DNA_Supragingival plaque 159 234 + Phe GAA [ENA] ¢þ
>WENV180751904 ODHS01264406 [ODHS] human metagenome; G_DNA_Supragingival plaque 99 24 - Phe GAA [ENA] ¢þ
>WENV180944645 ODUC01027292 [ODUC] human metagenome; G_DNA_Supragingival plaque 310 385 + Phe GAA [ENA] ¢þ
>WENV180982199 ODVE01207816 [ODVE] human metagenome; G_DNA_Supragingival plaque 194 119 - Phe GAA [ENA] ¢þ
>WENV181050711 ODYD01045969 [ODYD] human metagenome; G_DNA_Supragingival plaque 328 403 + Phe GAA [ENA] ¢þ
>WENV181077625 OEAP01093315 [OEAP] human metagenome; G_DNA_Supragingival plaque 177 252 + Phe GAA [ENA] ¢þ
>WENV181182926 OEJV01079106 [OEJV] human metagenome; G_DNA_Supragingival plaque 325 400 + Phe GAA [ENA] ¢þ
>W1610948699 LVBO01000648 Synergistota Synergistales bacterium Syner_01 [LVBO] 1598 1673 + Phe GAA [ENA] ¡û
Identical group No.538077 (1 seq.)
>C161104049 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 945335 945260 - Phe GAA - ¡û
Identical group No.541235 (1 seq.)
>W11300462 ADFP01000084 Synergistota Pyramidobacter piscolens W5455 [ADFP] 4947 5022 + Phe GAA [ENA] ¡û
Identical group No.541395 (1 seq.)
>W11138619 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 707382 707307 - Phe GAA [ENA] ¡û
Identical group No.553405 (3 seq.)
>W141146851 AWWC01000018 Synergistota Jonquetella sp. BV3C21 [AWWC] 46287 46362 + Phe GAA [ENA] ¡û
>W09132953 ACOO02000017 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 46520 46595 + Phe GAA [ENA] ¡û
>W121017480 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 51259 51334 + Phe GAA [ENA] ¡û
Identical group No.565201 (1 seq.)
>W131157317 AQRZ01000027 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 1116 1041 - Phe GAA [ENA] ¡û
Identical group No.601733 (3 seq.)
>WENV170655929 JTFN01097194 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 344 269 - Phe GAA [ENA] ¢þ
>WENV170656587 JTFO01026602 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 15 90 + Phe GAA [ENA] ¢þ
>W1710608704 FXBB01000019 Synergistota Dethiosulfovibrio salsuginis [FXBB] 5541 5616 + Phe GAA [ENA] ¡û
Identical group No.620676 (2 seq.)
>W141278943 JAFY01000005 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 427540 427465 - Phe GAA [ENA] ¡û
>W1610945996 LUYG01000291 Euryarchaeota Methanosarcinales archaeon Methan_03 [LUYG] 844 769 - Phe GAA [ENA] ¡û
Identical group No.621929 (1 seq.)
>W09108893 ABTR01000001 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 416866 416791 - Phe GAA [ENA] ¡û
Identical group No.621930 (3 seq.)
>WENV181409529 OGCI01000259 [OGCI] hot springs metagenome; Hot spring water 56980 56905 - Phe GAA [ENA] ¢þ
>W09110115 ABUW01000002 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 10797 10872 + Phe GAA [ENA] ¡û
>C10112999 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1573238 1573163 - Phe GAA [Ensembl] ¡û
Identical group No.641281 (1 seq.)
>C121005672 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 484223 484298 + Phe GAA [Ensembl] ¡û
Identical group No.642162 (1 seq.)
>W141279028 JAFZ01000004 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 84865 84790 - Phe GAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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