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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Thermodesulfobacteriota
Anticodon = ACT
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.276940 (3 seq.)
>W1711410987
MGQV01000075
Unclassified
Deltaproteobacteria bacterium RBG_16_58_17 [MGQV]
5281
5207
-
Ser
ACT
[ENA]
¡û
>W1711423150
MICJ01000085
Thermodesulfobacteriota
Syntrophobacterales bacterium GWC2_56_13 [MICJ]
28884
28958
+
Ser
ACT
[ENA]
¡û
>W1711423178
MICK01000117
Thermodesulfobacteriota
Syntrophobacterales bacterium GWF2_56_9 [MICK]
15214
15288
+
Ser
ACT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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