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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Tilapia Farm, microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000162)
Anticodon = GCT
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.12345 (190 seq.)
>W1710785101
LJHO01000007
Alphaproteobacteria
Novosphingobium sp. AAP1 [LJHO]
160710
160802
+
Ser
GCT
[ENA]
¡û
>W1710785549
LJHY01000021
Alphaproteobacteria
Novosphingobium sp. AAP83 [LJHY]
1758
1666
-
Ser
GCT
[ENA]
¡û
>W1710856918
LLZS01000009
Alphaproteobacteria
Novosphingobium fuchskuhlense [LLZS]
82315
82223
-
Ser
GCT
[ENA]
¡û
>W1710858230
LMAU01000003
Alphaproteobacteria
Tsuneonella troitsensis [LMAU]
183476
183384
-
Ser
GCT
[ENA]
¡û
>W1710864884
LMGF01000005
Alphaproteobacteria
Sphingopyxis sp. Root1497 [LMGF]
1220936
1221028
+
Ser
GCT
[ENA]
¡û
>W1710865021
LMGI01000003
Alphaproteobacteria
Sphingopyxis sp. Root154 [LMGI]
369586
369678
+
Ser
GCT
[ENA]
¡û
>W1710867431
LMIG01000005
Alphaproteobacteria
Sphingopyxis sp. Root214 [LMIG]
369491
369583
+
Ser
GCT
[ENA]
¡û
>W1710894127
LNFK01000078
Alphaproteobacteria
Sphingomonadales bacterium Ga0077559 [LNFK]
58508
58600
+
Ser
GCT
[ENA]
¡û
>W1710912512
LNRR01000004
Alphaproteobacteria
Sphingopyxis sp. H005 [LNRR]
272470
272562
+
Ser
GCT
[ENA]
¡û
>W1710912564
LNRS01000003
Alphaproteobacteria
Sphingopyxis sp. H012 [LNRS]
203732
203640
-
Ser
GCT
[ENA]
¡û
>W1710912602
LNRT01000002
Alphaproteobacteria
Sphingopyxis sp. H038 [LNRT]
116723
116631
-
Ser
GCT
[ENA]
¡û
>W1710912655
LNRU01000005
Alphaproteobacteria
Sphingopyxis sp. H053 [LNRU]
203732
203640
-
Ser
GCT
[ENA]
¡û
>W1710912691
LNRV01000006
Alphaproteobacteria
Sphingopyxis sp. H077 [LNRV]
103994
103902
-
Ser
GCT
[ENA]
¡û
>W1710912746
LNRW01000008
Alphaproteobacteria
Sphingopyxis sp. H080 [LNRW]
103994
103902
-
Ser
GCT
[ENA]
¡û
>W1710912791
LNRX01000007
Alphaproteobacteria
Sphingopyxis sp. H085 [LNRX]
103994
103902
-
Ser
GCT
[ENA]
¡û
>W1710912826
LNRY01000005
Alphaproteobacteria
Sphingopyxis sp. H093 [LNRY]
93586
93678
+
Ser
GCT
[ENA]
¡û
>W1710912864
LNRZ01000002
Alphaproteobacteria
Sphingopyxis sp. H050 [LNRZ]
265989
266081
+
Ser
GCT
[ENA]
¡û
>W1710912932
LNSA01000015
Alphaproteobacteria
Sphingopyxis sp. H115 [LNSA]
89242
89334
+
Ser
GCT
[ENA]
¡û
>W1710913077
LNSD01000015
Alphaproteobacteria
Sphingopyxis sp. H057 [LNSD]
14648
14740
+
Ser
GCT
[ENA]
¡û
>W1710913122
LNSE01000015
Alphaproteobacteria
Sphingopyxis sp. H067 [LNSE]
14648
14740
+
Ser
GCT
[ENA]
¡û
>W1710913167
LNSF01000014
Alphaproteobacteria
Sphingopyxis sp. H071 [LNSF]
14648
14740
+
Ser
GCT
[ENA]
¡û
>W1710913218
LNSG01000020
Alphaproteobacteria
Sphingopyxis sp. H073 [LNSG]
14747
14839
+
Ser
GCT
[ENA]
¡û
>W1710913248
LNSH01000017
Alphaproteobacteria
Sphingopyxis sp. H081 [LNSH]
14648
14740
+
Ser
GCT
[ENA]
¡û
>W1710913298
LNSI01000015
Alphaproteobacteria
Sphingopyxis sp. H100 [LNSI]
73110
73018
-
Ser
GCT
[ENA]
¡û
>W1710913344
LNSJ01000020
Alphaproteobacteria
Sphingopyxis sp. H107 [LNSJ]
73110
73018
-
Ser
GCT
[ENA]
¡û
>W1710927042
LOEX01000138
Alphaproteobacteria
Sphingomonadales bacterium BRH_c42 [LOEX]
3768
3860
+
Ser
GCT
[ENA]
¡û
>W1711072119
LSHH01000107
Alphaproteobacteria
Blastomonas sp. CCH3-A3 [LSHH]
839
747
-
Ser
GCT
[ENA]
¡û
>W1711072170
LSHI01000084
Alphaproteobacteria
Blastomonas sp. CCH9-F3 [LSHI]
162458
162550
+
Ser
GCT
[ENA]
¡û
>W1711072195
LSHJ01000068
Alphaproteobacteria
Blastomonas sp. CCH6-A6 [LSHJ]
130337
130429
+
Ser
GCT
[ENA]
¡û
>W1711072248
LSHK01000045
Alphaproteobacteria
Blastomonas sp. CCH8-E1 [LSHK]
8865
8773
-
Ser
GCT
[ENA]
¡û
>W1711072270
LSHL01000037
Alphaproteobacteria
Blastomonas sp. CCH10-E1 [LSHL]
140
48
-
Ser
GCT
[ENA]
¡û
>W1711072328
LSHM01000032
Alphaproteobacteria
Blastomonas sp. CCH9-A1 [LSHM]
69470
69562
+
Ser
GCT
[ENA]
¡û
>W1711072352
LSHN01000014
Alphaproteobacteria
Blastomonas sp. CCH13-E1 [LSHN]
140
48
-
Ser
GCT
[ENA]
¡û
>W1711072401
LSHO01000031
Alphaproteobacteria
Blastomonas sp. CCH2-E1 [LSHO]
39261
39169
-
Ser
GCT
[ENA]
¡û
>W1711072451
LSHP01000069
Betaproteobacteria
Acidovorax delafieldii [LSHP]
3974
3882
-
Ser
GCT
[ENA]
¡û
>W1711072551
LSHR01000090
Alphaproteobacteria
Blastomonas sp. CCH3-E3 [LSHR]
212694
212786
+
Ser
GCT
[ENA]
¡û
>W1711072587
LSHS01000137
Alphaproteobacteria
Blastomonas sp. CCH8-A3 [LSHS]
205
297
+
Ser
GCT
[ENA]
¡û
>W1711072627
LSHT01000095
Alphaproteobacteria
Sphingomonas sp. CCH18-B1 [LSHT]
1399
1307
-
Ser
GCT
[ENA]
¡û
>W1711072642
LSHU01000007
Alphaproteobacteria
Blastomonas sp. CCH7-E1 [LSHU]
37550
37458
-
Ser
GCT
[ENA]
¡û
>W1711072695
LSHV01000072
Alphaproteobacteria
Blastomonas sp. CCH15-G10 [LSHV]
21917
21825
-
Ser
GCT
[ENA]
¡û
>W1711072807
LSHY01000067
Alphaproteobacteria
Blastomonas sp. CCH5-E3 [LSHY]
4619
4711
+
Ser
GCT
[ENA]
¡û
>W1711072844
LSHZ01000027
Alphaproteobacteria
Blastomonas sp. CCH4-D12 [LSHZ]
3974
3882
-
Ser
GCT
[ENA]
¡û
>W1711072888
LSIA01000050
Alphaproteobacteria
Novosphingobium sp. CCH12-A3 [LSIA]
60247
60339
+
Ser
GCT
[ENA]
¡û
>W1711073476
LSIO01000170
Alphaproteobacteria
Blastomonas sp. CCH5-A3 [LSIO]
1916
1824
-
Ser
GCT
[ENA]
¡û
>W1711073497
LSIP01000297
Alphaproteobacteria
Erythrobacter donghaensis [LSIP]
12558
12466
-
Ser
GCT
[ENA]
¡û
>W1711073607
LSIS01000173
Alphaproteobacteria
Blastomonas sp. CCH1-A6 [LSIS]
17889
17797
-
Ser
GCT
[ENA]
¡û
>W1711074163
LSJG01000193
Alphaproteobacteria
Porphyrobacter sp. CCH7-A1 [LSJG]
71799
71891
+
Ser
GCT
[ENA]
¡û
>W1711075059
LSKB01000090
Alphaproteobacteria
Blastomonas sp. CCH11-A4 [LSKB]
204703
204611
-
Ser
GCT
[ENA]
¡û
>W1711075453
LSKK01000250
Alphaproteobacteria
Blastomonas sp. CCH2-A2 [LSKK]
25783
25691
-
Ser
GCT
[ENA]
¡û
>W1711075830
LSKS01000554
Betaproteobacteria
Acidovorax sp. CCH12-A4 [LSKS]
53472
53564
+
Ser
GCT
[ENA]
¡û
>W1711259770
LYVN01000020
Alphaproteobacteria
Sphingopyxis sp. KK2 [LYVN]
21187
21095
-
Ser
GCT
[ENA]
¡û
>W1711386407
MEFH01000056
Alphaproteobacteria
Sphingopyxis sp. SCN 67-31 [MEFH]
94884
94792
-
Ser
GCT
[ENA]
¡û
>W1711387031
MEGD01000003
Alphaproteobacteria
Novosphingobium sp. SCN 66-18 [MEGD]
146634
146726
+
Ser
GCT
[ENA]
¡û
>C171128432
LT598653
Alphaproteobacteria
uncultured Sphingopyxis sp. [LT598653]
2217185
2217093
-
Ser
GCT
-
¡û
>W131058864
ANFZ01000006
Alphaproteobacteria
Blastomonas sp. AAP53 [ANFZ]
61338
61246
-
Ser
GCT
[ENA]
¡û
>W131104446
APCQ01000130
Alphaproteobacteria
Novosphingobium sp. B-7 [APCQ]
520
612
+
Ser
GCT
[ENA]
¡û
>C014725
CP000248
Alphaproteobacteria
Novosphingobium aromaticivorans DSM 12444 [CP000248]
839894
839802
-
Ser
GCT
[Ensembl]
¡û
>C019754
CP000356
Alphaproteobacteria
Sphingopyxis alaskensis RB2256 [CP000356]
1401192
1401100
-
Ser
GCT
[Ensembl]
¡û
>WENV180041013
LLBZ010033938
[LLBZ] soil metagenome; soil from tomato rhizosphere
7894
7802
-
Ser
GCT
[ENA]
¢þ
>WENV180298334
OBJA01282870
[OBJA] soil metagenome; sediment, water from around vicinity
34
126
+
Ser
GCT
[ENA]
¢þ
>WENV180344625
OBLL01073412
[OBLL] soil metagenome; soil
322
230
-
Ser
GCT
[ENA]
¢þ
>WENV180368334
OBOF01061206
[OBOF] marine metagenome; ENVO:00002010
158
66
-
Ser
GCT
[ENA]
¢þ
>WENV180390995
OBPM01000723
[OBPM] marine metagenome; ENVO:00002010
1766
1674
-
Ser
GCT
[ENA]
¢þ
>WENV180594047
OCOY01019945
[OCOY] marine metagenome; ENVO:00002010
202
110
-
Ser
GCT
[ENA]
¢þ
>WENV180694183
OCZS012046731
[OCZS] soil metagenome; soil
90
182
+
Ser
GCT
[ENA]
¢þ
>W141078104
ATHO01000109
Alphaproteobacteria
Sphingobium quisquiliarum P25 [ATHO]
52400
52492
+
Ser
GCT
[ENA]
¡û
>WENV181172368
OEIV010634919
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
72
164
+
Ser
GCT
[ENA]
¢þ
>WENV181222918
OFDC01000640
[OFDC] hot springs metagenome; Water
7586
7678
+
Ser
GCT
[ENA]
¢þ
>WENV181226833
OFDN01000136
[OFDN] hot springs metagenome; Water
41039
40947
-
Ser
GCT
[ENA]
¢þ
>WENV181368458
OFQL01006366
[OFQL] freshwater metagenome; Freshwater Lake
83
175
+
Ser
GCT
[ENA]
¢þ
>WENV181370275
OFQS01001747
[OFQS] freshwater metagenome; Freshwater Lake
1756
1848
+
Ser
GCT
[ENA]
¢þ
>WENV181385161
OFRI01043154
[OFRI] wastewater metagenome; Exp Tend VB 90WW
701
793
+
Ser
GCT
[ENA]
¢þ
>WENV181416800
OGCL01153603
[OGCL] hot springs metagenome; Hot spring water
250
158
-
Ser
GCT
[ENA]
¢þ
>W141193320
AYSC01000005
Alphaproteobacteria
Blastomonas sp. CACIA14H2 [AYSC]
57577
57669
+
Ser
GCT
[ENA]
¡û
>W141230385
BASZ01000004
Alphaproteobacteria
Caenibius tardaugens NBRC 16725 [BASZ]
492547
492455
-
Ser
GCT
[ENA]
¡û
>WENV183729304
PJTQ01020691
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
455
547
+
Ser
GCT
[ENA]
¢þ
>ENV08001523
ABNG01003556
freshwater metagenome; microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
28
120
+
Ser
GCT
[ENA]
¡û
>WENV170009627
APMI01001017
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
524
616
+
Ser
GCT
[ENA]
¢þ
>WENV170201810
CEPQ01052771
[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
1334
1242
-
Ser
GCT
[ENA]
¢þ
>WENV170216588
CEPX01212478
[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
385
477
+
Ser
GCT
[ENA]
¢þ
>WENV170711255
LNFM01004244
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
26736
26644
-
Ser
GCT
[ENA]
¢þ
>WENV171003061
NKIC01008297
[NKIC] algae metagenome; Clonal culture of Asterionella formosa BG1 isolated from Esthwaite Water
80
172
+
Ser
GCT
[ENA]
¢þ
>W141484886
JFYY01000009
Alphaproteobacteria
Sphingomonas paucimobilis [JFYY]
97015
96923
-
Ser
GCT
[ENA]
¡û
>C181133085
CP026381
Alphaproteobacteria
Sphingopyxis sp. MG [CP026381]
1797344
1797252
-
Ser
GCT
-
¡û
>C191000348
AP017603
Alphaproteobacteria
Sphingopyxis sp. EG6 [AP017603]
1297234
1297326
+
Ser
GCT
-
¡û
>C191000588
AP017898
Alphaproteobacteria
Sphingopyxis sp. FD7 [AP017898]
1352512
1352420
-
Ser
GCT
-
¡û
>C191057059
CP028347
Alphaproteobacteria
Novosphingobium sp. THN1 [CP028347]
1655420
1655328
-
Ser
GCT
-
¡û
>W09100301
AAAV03000001
Alphaproteobacteria
Novosphingobium aromaticivorans DSM 12444 [AAAV]
1017491
1017399
-
Ser
GCT
[ENA]
¡û
>W09102965
AAIP01000013
Alphaproteobacteria
Sphingopyxis alaskensis RB2256 [AAIP]
11136
11228
+
Ser
GCT
[ENA]
¡û
>C191121055
CP034179
Alphaproteobacteria
Caenibius tardaugens NBRC 16725 [CP034179]
1742097
1742189
+
Ser
GCT
-
¡û
>C191163815
CP039250
Alphaproteobacteria
Sphingopyxis sp. PAMC25046 [CP039250]
2593191
2593099
-
Ser
GCT
-
¡û
>C191170975
CP039695
Alphaproteobacteria
Novosphingobium sp. EMRT-2 [CP039695]
3269486
3269394
-
Ser
GCT
-
¡û
>W141726136
JNAC01000035
Alphaproteobacteria
Sphingobium sp. DC-2 [JNAC]
96568
96476
-
Ser
GCT
[ENA]
¡û
>W1910549095
FZPA01000001
Alphaproteobacteria
Sphingopyxis indica DS15 [FZPA]
727183
727275
+
Ser
GCT
[ENA]
¡û
>W1910744244
MIAJ01000001
Alphaproteobacteria
Sphingomonadales bacterium RIFCSPHIGHO2_01_FULL_65_20 [MIAJ]
15796
15704
-
Ser
GCT
[ENA]
¡û
>W1910744339
MIAL01000016
Alphaproteobacteria
Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24 [MIAL]
144146
144238
+
Ser
GCT
[ENA]
¡û
>W1910744397
MIAM01000046
Alphaproteobacteria
Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19 [MIAM]
18675
18767
+
Ser
GCT
[ENA]
¡û
>W1910934230
NIWD01000002
Alphaproteobacteria
Sphingopyxis sp. GW247-27LB [NIWD]
484601
484693
+
Ser
GCT
[ENA]
¡û
>W1911495428
OBMU01000001
Alphaproteobacteria
Novosphingobium sp. Chol11 [OBMU]
100290
100198
-
Ser
GCT
[ENA]
¡û
>W1911737903
QTTB01000004
Alphaproteobacteria
Tsuneonella troitsensis KMM 6042 [QTTB]
181824
181732
-
Ser
GCT
[ENA]
¡û
>SRA1001619
SRR001074.30570
Tilapia Farm, microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000162)
28
120
+
Ser
GCT
[SRA]
>W1810121231
PHUF01000004
Alphaproteobacteria
Novosphingobium kunmingense CGMCC 1.12274 [PHUF]
274529
274621
+
Ser
GCT
[ENA]
¡û
>W1810195677
PKRT01000001
Alphaproteobacteria
Novosphingobium sp. TH158 [PKRT]
1351302
1351394
+
Ser
GCT
[ENA]
¡û
>W1810463726
PZZU01000010
Alphaproteobacteria
Novosphingobium sp. GV064 [PZZU]
7676
7584
-
Ser
GCT
[ENA]
¡û
>W1810477317
QAOS01000010
Alphaproteobacteria
Novosphingobium sp. GV055 [QAOS]
7676
7584
-
Ser
GCT
[ENA]
¡û
>W1810513871
QBUA01000010
Alphaproteobacteria
Novosphingobium sp. GV061 [QBUA]
7676
7584
-
Ser
GCT
[ENA]
¡û
>W1810514084
QBUE01000010
Alphaproteobacteria
Novosphingobium sp. GV079 [QBUE]
7676
7584
-
Ser
GCT
[ENA]
¡û
>W1810514293
QBUI01000010
Alphaproteobacteria
Novosphingobium sp. GV027 [QBUI]
7676
7584
-
Ser
GCT
[ENA]
¡û
>W1810597635
QGHL01000020
Alphaproteobacteria
Novosphingobium meiothermophilum SYSU G00007 [QGHL]
288757
288849
+
Ser
GCT
[ENA]
¡û
>W1810658699
QJJM01000026
Alphaproteobacteria
Blastomonas natatoria DSM 3183 [QJJM]
19054
19146
+
Ser
GCT
[ENA]
¡û
>W1810677128
QKMM01000005
Alphaproteobacteria
Novosphingobium sp. B3058 49 [QKMM]
61837
61745
-
Ser
GCT
[ENA]
¡û
>W1810683134
QKVT01000001
Alphaproteobacteria
Blastomonas sp. UPD001 [QKVT]
81352
81444
+
Ser
GCT
[ENA]
¡û
>W1810789427
QRGP01000003
Alphaproteobacteria
Sphingorhabdus pulchriflava GY_G [QRGP]
314553
314461
-
Ser
GCT
[ENA]
¡û
>C151044373
CP009122
Alphaproteobacteria
Sphingopyxis fribergensis Kp5.2 [CP009122]
1624590
1624682
+
Ser
GCT
[Ensembl]
¡û
>C151051503
CP009452
Alphaproteobacteria
Sphingopyxis sp. 113P3 [CP009452]
2134515
2134607
+
Ser
GCT
-
¡û
>W1510015778
BBRO01000001
Alphaproteobacteria
Sphingopyxis sp. C-1 [BBRO]
1848741
1848833
+
Ser
GCT
[ENA]
¡û
>W1510019774
BBXA01000033
Alphaproteobacteria
Novosphingobium sp. MD-1 [BBXA]
422841
422933
+
Ser
GCT
[ENA]
¡û
>W1511221152
JNFC01000005
Alphaproteobacteria
Sphingopyxis sp. LC363 [JNFC]
51665
51573
-
Ser
GCT
[ENA]
¡û
>W1511221189
JNFD01000001
Alphaproteobacteria
Sphingopyxis sp. LC81 [JNFD]
214051
214143
+
Ser
GCT
[ENA]
¡û
>W1511324680
JQFJ01000002
Alphaproteobacteria
Sphingopyxis sp. MWB1 [JQFJ]
431347
431255
-
Ser
GCT
[ENA]
¡û
>W1511352538
JROG01000007
Alphaproteobacteria
Sphingomonas sp. 35-24ZXX 35-24ZXX 35-24zxx [JROG]
199463
199555
+
Ser
GCT
[ENA]
¡û
>W1511356993
JRVC01000003
Alphaproteobacteria
Novosphingobium subterraneum DSM 12447 [JRVC]
197163
197071
-
Ser
GCT
[ENA]
¡û
>C161021387
CP009429
Alphaproteobacteria
Sphingopyxis macrogoltabida 203 [CP009429]
1914503
1914595
+
Ser
GCT
[Ensembl]
¡û
>C161040489
CP012199
Alphaproteobacteria
Sphingopyxis granuli TFA [CP012199]
2320746
2320838
+
Ser
GCT
[Ensembl]
¡û
>C161043656
CP012700
Alphaproteobacteria
Sphingopyxis macrogoltabida EY-1 [CP012700]
2002235
2002327
+
Ser
GCT
[Ensembl]
¡û
>C161055686
CP013344
Alphaproteobacteria
Sphingopyxis macrogoltabida 203N [CP013344]
2083920
2083828
-
Ser
GCT
-
¡û
>C161099961
CP016591
Alphaproteobacteria
Tsuneonella dongtanensis KCTC 22672 [CP016591]
1182732
1182640
-
Ser
GCT
[Ensembl]
¡û
>WENV056721
AACY023263444
Marine microbial communities from Global Ocean Sampling (GOS)
819
913
+
Ser
GCT
[ENA]
>W1610071190
BCTW01000010
Alphaproteobacteria
Novosphingobium lentum NBRC 107847 [BCTW]
197665
197757
+
Ser
GCT
[ENA]
¡û
>W1610071368
BCUA01000016
Alphaproteobacteria
Sphingopyxis granuli NBRC 100800 [BCUA]
50862
50770
-
Ser
GCT
[ENA]
¡û
>W1610076565
BCYV01000010
Alphaproteobacteria
Novosphingobium capsulatum NBRC 12533 [BCYV]
13210
13302
+
Ser
GCT
[ENA]
¡û
>W1610077026
BCZF01000003
Alphaproteobacteria
Novosphingobium subterraneum NBRC 16086 [BCZF]
126057
125965
-
Ser
GCT
[ENA]
¡û
>W1610648907
LJHO01000007
Alphaproteobacteria
Novosphingobium sp. AAP1 [LJHO]
160710
160802
+
Ser
GCT
[ENA]
¡û
>W1610649355
LJHY01000021
Alphaproteobacteria
Novosphingobium sp. AAP83 [LJHY]
1758
1666
-
Ser
GCT
[ENA]
¡û
>W1610719299
LLZS01000009
Alphaproteobacteria
Novosphingobium fuchskuhlense [LLZS]
82315
82223
-
Ser
GCT
[ENA]
¡û
>W1610720576
LMAU01000003
Alphaproteobacteria
Tsuneonella troitsensis [LMAU]
183476
183384
-
Ser
GCT
[ENA]
¡û
>W1610727230
LMGF01000005
Alphaproteobacteria
Sphingopyxis sp. Root1497 [LMGF]
1220936
1221028
+
Ser
GCT
[ENA]
¡û
>W1610727367
LMGI01000003
Alphaproteobacteria
Sphingopyxis sp. Root154 [LMGI]
369586
369678
+
Ser
GCT
[ENA]
¡û
>W1610729777
LMIG01000005
Alphaproteobacteria
Sphingopyxis sp. Root214 [LMIG]
369491
369583
+
Ser
GCT
[ENA]
¡û
>W1610754393
LNFK01000078
Alphaproteobacteria
Sphingomonadales bacterium Ga0077559 [LNFK]
58508
58600
+
Ser
GCT
[ENA]
¡û
>W1610770871
LNRR01000004
Alphaproteobacteria
Sphingopyxis sp. H005 [LNRR]
272470
272562
+
Ser
GCT
[ENA]
¡û
>W1610770923
LNRS01000003
Alphaproteobacteria
Sphingopyxis sp. H012 [LNRS]
203732
203640
-
Ser
GCT
[ENA]
¡û
>W1610770961
LNRT01000002
Alphaproteobacteria
Sphingopyxis sp. H038 [LNRT]
116723
116631
-
Ser
GCT
[ENA]
¡û
>W1610771014
LNRU01000005
Alphaproteobacteria
Sphingopyxis sp. H053 [LNRU]
203732
203640
-
Ser
GCT
[ENA]
¡û
>W1610771050
LNRV01000006
Alphaproteobacteria
Sphingopyxis sp. H077 [LNRV]
103994
103902
-
Ser
GCT
[ENA]
¡û
>W1610771105
LNRW01000008
Alphaproteobacteria
Sphingopyxis sp. H080 [LNRW]
103994
103902
-
Ser
GCT
[ENA]
¡û
>W1610771150
LNRX01000007
Alphaproteobacteria
Sphingopyxis sp. H085 [LNRX]
103994
103902
-
Ser
GCT
[ENA]
¡û
>W1610771185
LNRY01000005
Alphaproteobacteria
Sphingopyxis sp. H093 [LNRY]
93586
93678
+
Ser
GCT
[ENA]
¡û
>W1610771223
LNRZ01000002
Alphaproteobacteria
Sphingopyxis sp. H050 [LNRZ]
265989
266081
+
Ser
GCT
[ENA]
¡û
>W1610771291
LNSA01000015
Alphaproteobacteria
Sphingopyxis sp. H115 [LNSA]
89242
89334
+
Ser
GCT
[ENA]
¡û
>W1610771436
LNSD01000015
Alphaproteobacteria
Sphingopyxis sp. H057 [LNSD]
14648
14740
+
Ser
GCT
[ENA]
¡û
>W1610771481
LNSE01000015
Alphaproteobacteria
Sphingopyxis sp. H067 [LNSE]
14648
14740
+
Ser
GCT
[ENA]
¡û
>W1610771526
LNSF01000014
Alphaproteobacteria
Sphingopyxis sp. H071 [LNSF]
14648
14740
+
Ser
GCT
[ENA]
¡û
>W1610771577
LNSG01000020
Alphaproteobacteria
Sphingopyxis sp. H073 [LNSG]
14747
14839
+
Ser
GCT
[ENA]
¡û
>W1610771607
LNSH01000017
Alphaproteobacteria
Sphingopyxis sp. H081 [LNSH]
14648
14740
+
Ser
GCT
[ENA]
¡û
>W1610771657
LNSI01000015
Alphaproteobacteria
Sphingopyxis sp. H100 [LNSI]
73110
73018
-
Ser
GCT
[ENA]
¡û
>W1610771703
LNSJ01000020
Alphaproteobacteria
Sphingopyxis sp. H107 [LNSJ]
73110
73018
-
Ser
GCT
[ENA]
¡û
>W1610784584
LOEX01000138
Alphaproteobacteria
Sphingomonadales bacterium BRH_c42 [LOEX]
3768
3860
+
Ser
GCT
[ENA]
¡û
>W1610911379
LSHH01000107
Alphaproteobacteria
Blastomonas sp. CCH3-A3 [LSHH]
839
747
-
Ser
GCT
[ENA]
¡û
>W1610911430
LSHI01000084
Alphaproteobacteria
Blastomonas sp. CCH9-F3 [LSHI]
162458
162550
+
Ser
GCT
[ENA]
¡û
>W1610911455
LSHJ01000068
Alphaproteobacteria
Blastomonas sp. CCH6-A6 [LSHJ]
130337
130429
+
Ser
GCT
[ENA]
¡û
>W1610911508
LSHK01000045
Alphaproteobacteria
Blastomonas sp. CCH8-E1 [LSHK]
8865
8773
-
Ser
GCT
[ENA]
¡û
>W1610911530
LSHL01000037
Alphaproteobacteria
Blastomonas sp. CCH10-E1 [LSHL]
140
48
-
Ser
GCT
[ENA]
¡û
>W1610911588
LSHM01000032
Alphaproteobacteria
Blastomonas sp. CCH9-A1 [LSHM]
69470
69562
+
Ser
GCT
[ENA]
¡û
>W1610911612
LSHN01000014
Alphaproteobacteria
Blastomonas sp. CCH13-E1 [LSHN]
140
48
-
Ser
GCT
[ENA]
¡û
>W1610911661
LSHO01000031
Alphaproteobacteria
Blastomonas sp. CCH2-E1 [LSHO]
39261
39169
-
Ser
GCT
[ENA]
¡û
>W1610911711
LSHP01000069
Betaproteobacteria
Acidovorax delafieldii [LSHP]
3974
3882
-
Ser
GCT
[ENA]
¡û
>W1610911811
LSHR01000090
Alphaproteobacteria
Blastomonas sp. CCH3-E3 [LSHR]
212694
212786
+
Ser
GCT
[ENA]
¡û
>W1610911847
LSHS01000137
Alphaproteobacteria
Blastomonas sp. CCH8-A3 [LSHS]
205
297
+
Ser
GCT
[ENA]
¡û
>W1610911887
LSHT01000095
Alphaproteobacteria
Sphingomonas sp. CCH18-B1 [LSHT]
1399
1307
-
Ser
GCT
[ENA]
¡û
>W1610911902
LSHU01000007
Alphaproteobacteria
Blastomonas sp. CCH7-E1 [LSHU]
37550
37458
-
Ser
GCT
[ENA]
¡û
>W1610911955
LSHV01000072
Alphaproteobacteria
Blastomonas sp. CCH15-G10 [LSHV]
21917
21825
-
Ser
GCT
[ENA]
¡û
>W1610912067
LSHY01000067
Alphaproteobacteria
Blastomonas sp. CCH5-E3 [LSHY]
4619
4711
+
Ser
GCT
[ENA]
¡û
>W1610912104
LSHZ01000027
Alphaproteobacteria
Blastomonas sp. CCH4-D12 [LSHZ]
3974
3882
-
Ser
GCT
[ENA]
¡û
>W1610912148
LSIA01000050
Alphaproteobacteria
Novosphingobium sp. CCH12-A3 [LSIA]
60247
60339
+
Ser
GCT
[ENA]
¡û
>W1610912781
LSIO01000170
Alphaproteobacteria
Blastomonas sp. CCH5-A3 [LSIO]
1916
1824
-
Ser
GCT
[ENA]
¡û
>W1610912802
LSIP01000297
Alphaproteobacteria
Erythrobacter donghaensis [LSIP]
12558
12466
-
Ser
GCT
[ENA]
¡û
>W1610912912
LSIS01000173
Alphaproteobacteria
Blastomonas sp. CCH1-A6 [LSIS]
17889
17797
-
Ser
GCT
[ENA]
¡û
>W1610913468
LSJG01000193
Alphaproteobacteria
Porphyrobacter sp. CCH7-A1 [LSJG]
71799
71891
+
Ser
GCT
[ENA]
¡û
>W1610914364
LSKB01000090
Alphaproteobacteria
Blastomonas sp. CCH11-A4 [LSKB]
204703
204611
-
Ser
GCT
[ENA]
¡û
>W1610914758
LSKK01000250
Alphaproteobacteria
Blastomonas sp. CCH2-A2 [LSKK]
25783
25691
-
Ser
GCT
[ENA]
¡û
>W1610915135
LSKS01000554
Betaproteobacteria
Acidovorax sp. CCH12-A4 [LSKS]
53472
53564
+
Ser
GCT
[ENA]
¡û
>W1710068555
BCTW01000010
Alphaproteobacteria
Novosphingobium lentum NBRC 107847 [BCTW]
197665
197757
+
Ser
GCT
[ENA]
¡û
>W1710068733
BCUA01000016
Alphaproteobacteria
Sphingopyxis granuli NBRC 100800 [BCUA]
50862
50770
-
Ser
GCT
[ENA]
¡û
>W1710074254
BCYV01000010
Alphaproteobacteria
Novosphingobium capsulatum NBRC 12533 [BCYV]
13210
13302
+
Ser
GCT
[ENA]
¡û
>W1710074715
BCZF01000003
Alphaproteobacteria
Novosphingobium subterraneum NBRC 16086 [BCZF]
126057
125965
-
Ser
GCT
[ENA]
¡û
>W1710507975
FMVR01000001
Alphaproteobacteria
Novosphingobium aromaticivorans stygium [FMVR]
131742
131650
-
Ser
GCT
[ENA]
¡û
>W1710540053
FNWK01000002
Alphaproteobacteria
Sphingopyxis sp. YR583 [FNWK]
431446
431354
-
Ser
GCT
[ENA]
¡û
>W1710602892
FUYP01000013
Alphaproteobacteria
Sphingopyxis flava [FUYP]
9573
9481
-
Ser
GCT
[ENA]
¡û
>W1710606008
FWXL01000012
Alphaproteobacteria
Novosphingobium sp. B1 [FWXL]
82358
82450
+
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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