tRNA genes clustered and arranged according to each identical group

Tilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)

Anticodon = CAT

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.310548 (48 seq.)
>W1711293544 LZYT01000052 Bacillota Clostridium felsineum DSM 794 [LZYT] 311 387 + Met CAT [ENA] ¡û
>W1711293629 LZYV01000099 Firmicutes Clostridium roseum (LZYV) roseum [LZYV] 314 390 + Met CAT [ENA] ¡û
>W1711293709 LZYW01000140 Firmicutes Clostridium aurantibutyricum (LZYW) aurantibutyricum [LZYW] 260 336 + Met CAT [ENA] ¡û
>W1711293769 LZYX01000004 Bacillota Clostridium acetobutylicum [LZYX] 87050 87126 + Met CAT [ENA] ¡û
>W1711293790 LZYX01000013 Bacillota Clostridium acetobutylicum [LZYX] 127 203 + Met CAT [ENA] ¡û
>W1711293826 LZYY01000010 Bacillota Clostridium acetobutylicum [LZYY] 57 133 + Met CAT [ENA] ¡û
>W1711293846 LZYY01000016 Bacillota Clostridium acetobutylicum [LZYY] 644 568 - Met CAT [ENA] ¡û
>W1711902973 MZGV01000091 Bacillota Clostridium oryzae [MZGV] 1041 967 - Met CAT [ENA] ¡û
>C004959 AE001437 Bacillota Clostridium acetobutylicum ATCC 824 [AE001437] 14497 14573 + Met CAT [Ensembl] ¡û
>C004993 AE001437 Bacillota Clostridium acetobutylicum ATCC 824 [AE001437] 3338114 3338038 - Met CAT [Ensembl] ¡û
>WENV180326904 OBKS01233697 [OBKS] human gut metagenome; human gut 221 145 - Ile2 CAT [ENA] ¡û
>WENV180474788 OBYS01051681 [OBYS] human gut metagenome; faeces 134 58 - Ile2 CAT [ENA] ¡û
>WENV181449907 OGDX01028120 [OGDX] metagenome; Human gut stool 585 659 + Ile2 CAT [ENA] ¡û
>WENV182075208 OHFQ01049759 [OHFQ] human gut metagenome; feces 82 6 - Ile2 CAT [ENA] ¡û
>WENV182838210 OKGO01003248 [OKGO] human gut metagenome; human gut 61 137 + Ile2 CAT [ENA] ¡û
>WENV183282798 OLSC01025897 [OLSC] human gut metagenome; faeces 497 421 - Ile2 CAT [ENA] ¡û
>ENV08001509 ABNF01012941 freshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) 9 85 + Met CAT [ENA] ¡û
>WENV170563607 CZCB01022830 [CZCB] anaerobic digester metagenome; anaerobic digester 3851 3775 - Met CAT [ENA] ¡û
>W1910888191 NERJ01000008 Bacillota Clostridium acetobutylicum JB200 [NERJ] 86972 87048 + Met CAT [ENA] ¡û
>SRA1001613 SRR001073.55216 Tilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161) 9 85 + Met CAT [SRA]
>W1810394209 PYBN01000003 Bacillota Clostridium sp. NJ4 [PYBN] 609461 609537 + Met CAT [ENA] ¡û
>W1810394214 PYBN01000004 Bacillota Clostridium sp. NJ4 [PYBN] 773109 773033 - Met CAT [ENA] ¡û
>W2010583858 JAAZWQ010000020 Bacillota Clostridium acetobutylicum DJ038 [JAAZWQ] 592 516 - Ile2 CAT [ENA] ¡û
>W2010586101 JABANX010000033 Bacillota Clostridium acetobutylicum DJ103 [JABANX] 592 516 - Ile2 CAT [ENA] ¡û
>W2010600355 JABFUK010000001 Bacillota Clostridium acetobutylicum DJ074 [JABFUK] 1950412 1950488 + Ile2 CAT [ENA] ¡û
>W2010600383 JABFUK010000001 Bacillota Clostridium acetobutylicum DJ074 [JABFUK] 1332962 1332886 - Ile2 CAT [ENA] ¡û
>W2010601747 JABFUZ010000001 Bacillota Clostridium acetobutylicum DJ313 [JABFUZ] 943754 943830 + Ile2 CAT [ENA] ¡û
>W2010601789 JABFUZ010000001 Bacillota Clostridium acetobutylicum DJ313 [JABFUZ] 326295 326219 - Ile2 CAT [ENA] ¡û
>W2010627029 JABTAD010000001 Bacillota Clostridium acetobutylicum DJ310 [JABTAD] 1433633 1433557 - Ile2 CAT [ENA] ¡û
>W2010627076 JABTAD010000003 Bacillota Clostridium acetobutylicum DJ310 [JABTAD] 444809 444885 + Ile2 CAT [ENA] ¡û
>W2010631097 JABTDX010000001 Bacillota Clostridium acetobutylicum DJ024 [JABTDX] 771152 771228 + Ile2 CAT [ENA] ¡û
>W2010631139 JABTDX010000001 Bacillota Clostridium acetobutylicum DJ024 [JABTDX] 153697 153621 - Ile2 CAT [ENA] ¡û
>W2010662446 JACBAB010000001 Bacillota Clostridium acetobutylicum DJ311 [JACBAB] 765905 765981 + Ile2 CAT [ENA] ¡û
>W2010662488 JACBAB010000001 Bacillota Clostridium acetobutylicum DJ311 [JACBAB] 148404 148328 - Ile2 CAT [ENA] ¡û
>W2010952817 NERJ01000008 Bacillota Clostridium acetobutylicum JB200 [NERJ] 86972 87048 + Ile2 CAT [ENA] ¡û
>W2012036709 VIBM01000010 Bacillota Clostridium acetobutylicum BOH3 [VIBM] 592 516 - Ile2 CAT [ENA] ¡û
>W2110453927 JAESWC010000014 Bacillota Clostridium sp. YIM B02515 [JAESWC] 433116 433040 - Ile2 CAT [ENA] ¡û
>W2110453951 JAESWC010000022 Bacillota Clostridium sp. YIM B02515 [JAESWC] 1021 945 - Ile2 CAT [ENA] ¡û
>C231376194 CP096980 Bacillota Clostridium felsineum DSM 794 [CP096980] 90807 90731 - Ile2 CAT - ¡û
>C231376200 CP096983 Bacillota Clostridium felsineum DSM 7320 [CP096983] 216262 216338 + Ile2 CAT - ¡û
>C231376293 CP096986 Bacillota Clostridium felsineum DSM 6424 [CP096986] 4653914 4653990 + Ile2 CAT - ¡û
>C231376419 CP096988 Bacillota Clostridium felsineum DSM 793 [CP096988] 3118133 3118057 - Ile2 CAT - ¡û
>C11104553 CP002660 Bacillota Clostridium acetobutylicum DSM 1731 [CP002660] 14497 14573 + Met CAT [Ensembl] ¡û
>C11104587 CP002660 Bacillota Clostridium acetobutylicum DSM 1731 [CP002660] 3339740 3339664 - Met CAT [Ensembl] ¡û
>C11104626 CP002118 Bacillota Clostridium acetobutylicum EA 2018 [CP002118] 14497 14573 + Met CAT [Ensembl] ¡û
>C11104662 CP002118 Bacillota Clostridium acetobutylicum EA 2018 [CP002118] 3337370 3337294 - Met CAT [Ensembl] ¡û
>W1511357557 JRWL01000011 Bacillota Clostridium acetobutylicum GXAS18-1 [JRWL] 87431 87507 + Met CAT [ENA] ¡û
>W1511707448 LGVB01000016 Bacillota Clostridium sp. DMHC 10 [LGVB] 366272 366348 + Met CAT [ENA] ¡û
Identical group No.324842 (17 seq.)
>WENV181427956 OGCU01000405 [OGCU] metagenome; Human gut stool 20761 20685 - Met CAT [ENA] ¡û
>WENV181561585 OGJD01019570 [OGJD] metagenome; Human gut stool 572 648 + Met CAT [ENA] ¡û
>WENV181580376 OGJZ01052897 [OGJZ] metagenome; Human gut stool 509 433 - Met CAT [ENA] ¡û
>WENV181623917 OGMJ01000485 [OGMJ] metagenome; Human gut stool 21018 21094 + Met CAT [ENA] ¡û
>W141171008 AXZF01000206 Fusobacteriota Cetobacterium somerae ATCC BAA-474 [AXZF] 118 194 + Met CAT [ENA] ¡û
>WENV181869739 OGWY01000608 [OGWY] human gut metagenome; faeces 24436 24360 - Met CAT [ENA] ¡û
>ENV08001510 ABNF01013481 freshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) 18 94 + Met CAT [ENA] ¡û
>SRA1001597 SRR001073.12657 Tilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161) 18 94 + Met CAT [SRA]
>W2010270676 CABKSZ020000131 Fusobacteriota Cetobacterium somerae [CABKSZ] 17835 17911 + Met CAT [ENA] ¡û
>W2010713544 JACHTH010000005 Fusobacteriota Cetobacterium sp. 2G large [JACHTH] 414211 414135 - Met CAT [ENA] ¡û
>W2010713563 JACHTH010000007 Fusobacteriota Cetobacterium sp. 2G large [JACHTH] 607683 607759 + Met CAT [ENA] ¡û
>W2010713569 JACHTH010000007 Fusobacteriota Cetobacterium sp. 2G large [JACHTH] 449624 449548 - Met CAT [ENA] ¡û
>C231318820 CP092519 Fusobacteriota Cetobacterium somerae CS2105-BJ [CP092519] 1462651 1462727 + Met CAT - ¡û
>W1511347887 JRJZ01000085 Fusobacteriota Cetobacterium sp. ZWU0022 [JRJZ] 38097 38021 - Met CAT [ENA] ¡û
>W1511347889 JRJZ01000117 Fusobacteriota Cetobacterium sp. ZWU0022 [JRJZ] 112591 112515 - Met CAT [ENA] ¡û
>W1511347895 JRJZ01000132 Fusobacteriota Cetobacterium sp. ZWU0022 [JRJZ] 190 114 - Met CAT [ENA] ¡û
>W1511403692 JTLI01000053 Fusobacteriota Cetobacterium sp. ZOR0034 [JTLI] 10440 10516 + Met CAT [ENA] ¡û
Identical group No.748759 (2 seq.)
>ENV08001518 ABNF01031528 freshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) 96 22 - Met CAT [ENA] ¡û
>SRA1001604 SRR001073.27219 Tilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161) 96 22 - Met CAT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK