tRNA genes clustered and arranged according to each identical group

Tilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161)

Anticodon = CGG

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.313629 (47 seq.)
>W1710892493 LNDU01000051 Nitrospirota Nitrospira sp. Ga0074138 [LNDU] 14018 14094 + Pro CGG [ENA] ¡û
>W1711385784 MEEP01000154 Nitrospirota Nitrospira sp. SCN 59-13 [MEEP] 1605 1681 + Pro CGG [ENA] ¡û
>WENV180041208 LLBZ010064546 [LLBZ] soil metagenome; soil from tomato rhizosphere 147 71 - Pro CGG [ENA] ¡û
>WENV180283417 OBID01000032 [OBID] metagenome; sludge 17294 17218 - Pro CGG [ENA] ¡û
>WENV180354568 OBLQ011922938 [OBLQ] soil metagenome; soil 129 53 - Pro CGG [ENA] ¡û
>WENV181168361 OEIU01299732 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 157 81 - Pro CGG [ENA] ¡û
>WENV181172308 OEIV010595276 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 90 166 + Pro CGG [ENA] ¡û
>WENV181192156 OEPS010438149 [OEPS] soil metagenome; soil 139 63 - Pro CGG [ENA] ¡û
>WENV183725311 PJQE01232069 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 189 265 + Pro CGG [ENA] ¡û
>ENV08001508 ABNF01012766 freshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) 31 107 + Pro CGG [ENA] ¡û
>WENV170551404 CXWJ01006772 [CXWJ] wastewater metagenome; activated sludge 9562 9486 - Pro CGG [ENA] ¡û
>WENV170552092 CXWJ01038277 [CXWJ] wastewater metagenome; activated sludge 1396 1320 - Pro CGG [ENA] ¡û
>WENV170552941 CXWK01004341 [CXWK] wastewater metagenome; activated sludge 24025 23949 - Pro CGG [ENA] ¡û
>WENV170556071 CXWL01004547 [CXWL] groundwater metagenome; biofilm material 1900 1976 + Pro CGG [ENA] ¡û
>WENV170556266 CXWL01006357 [CXWL] groundwater metagenome; biofilm material 3100 3176 + Pro CGG [ENA] ¡û
>WENV170556890 CXWL01015673 [CXWL] groundwater metagenome; biofilm material 2068 1992 - Pro CGG [ENA] ¡û
>WENV170557735 CXWL01035666 [CXWL] groundwater metagenome; biofilm material 1533 1457 - Pro CGG [ENA] ¡û
>WENV170565746 FKKE01000362 [FKKE] freshwater metagenome; freshwater 5996 5920 - Pro CGG [ENA] ¡û
>WENV170565802 FKKE01001018 [FKKE] freshwater metagenome; freshwater 15720 15796 + Pro CGG [ENA] ¡û
>WENV170576353 FRDC01000435 [FRDC] freshwater metagenome; water 167437 167361 - Pro CGG [ENA] ¡û
>WENV170577896 FSSH01002472 [FSSH] freshwater metagenome; drinking water 11777 11701 - Pro CGG [ENA] ¡û
>WENV170653484 JRYJ01002145 [JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 11060 10984 - Pro CGG [ENA] ¡û
>WENV170709406 LNFM01000317 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 14014 14090 + Pro CGG [ENA] ¡û
>WENV170713932 LNFM01047201 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 2313 2389 + Pro CGG [ENA] ¡û
>WENV170973821 MTKY01051110 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 14817 14741 - Pro CGG [ENA] ¡û
>W1910204674 FJVM01000007 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVM] 167437 167361 - Pro CGG [ENA] ¡û
>W1910204744 FJVM02000061 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVM] 9028 8952 - Pro CGG [ENA] ¡û
>W1910204748 FJVN01000021 Nitrospirota Nitrospira cf. moscoviensis SBR1015 [FJVN] 5996 5920 - Pro CGG [ENA] ¡û
>W1910441987 FWEX01000006 Nitrospirota Nitrospira sp. ND1 [FWEX] 640540 640464 - Pro CGG [ENA] ¡û
>SRA1001599 SRR001073.13403 Tilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA) (SRP000161) 31 107 + Pro CGG [SRA]
>SRA1002062 SRR001308.218790 Metagenomic characterization of a wastewater treatment plant (SRP000180) 249 173 - Pro CGG [SRA]
>C151086589 CP011801 Nitrospirota Nitrospira moscoviensis NSP M-1 [CP011801] 1074031 1074107 + Pro CGG - ¡û
>W2010405412 FWEX01000006 Nitrospirota Nitrospira sp. ND1 [FWEX] 640540 640464 - Pro CGG [ENA] ¡û
>W2110115320 CAJNBJ010000001 Nitrospirota Nitrospira defluvii [CAJNBJ] 40472 40396 - Pro CGG [ENA] ¡û
>C201201657 CP047423 Unclassified Candidatus Nitrospira sp. comreactor17 [CP047423] 2414386 2414310 - Pro CGG - ¡û
>C211096021 CP054184 Nitrospirota Nitrospira sp. [CP054184] 1170469 1170393 - Pro CGG - ¡û
>C241267233 CP126121 Nitrospirota Nitrospira sp. [CP126121] 4490424 4490348 - Pro CGG - ¡û
>C241267289 CP126123 Nitrospirota Nitrospira sp. [CP126123] 1782402 1782326 - Pro CGG - ¡û
>C10109721 FP929003 Nitrospirota Nitrospira defluvii [FP929003] 1210875 1210951 + Pro CGG [Ensembl] ¡û
>C161107288 LN885086 Nitrospirota Candidatus Nitrospira inopinata [LN885086] 3127365 3127289 - Pro CGG [Ensembl] ¡û
>W1610121148 CZPZ01000005 Nitrospirota Candidatus Nitrospira nitrificans [CZPZ] 62106 62030 - Pro CGG [ENA] ¡û
>W1610121216 CZQA01000010 Nitrospirota Candidatus Nitrospira nitrosa [CZQA] 38259 38183 - Pro CGG [ENA] ¡û
>W1610574661 JZQY01000033 Nitrospirota Nitrospira sp. OLB3 [JZQY] 244144 244220 + Pro CGG [ENA] ¡û
>W1610752759 LNDU01000051 Nitrospirota Nitrospira sp. Ga0074138 [LNDU] 14018 14094 + Pro CGG [ENA] ¡û
>W1710123852 CZPZ01000005 Nitrospirota Candidatus Nitrospira nitrificans [CZPZ] 62106 62030 - Pro CGG [ENA] ¡û
>W1710123920 CZQA01000010 Nitrospirota Candidatus Nitrospira nitrosa [CZQA] 38259 38183 - Pro CGG [ENA] ¡û
>W1710691896 JZQY01000033 Nitrospirota Nitrospira sp. OLB3 [JZQY] 244144 244220 + Pro CGG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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