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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Unclassified
Anticodon = TTA
HIT:
5 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.264107 (1 seq.)
>W1911494339
OBKE01003733
Unclassified
bacterium [OBKE]
398
477
+
STOP
TTA
[ENA]
¡û
Identical group No.753110 (1 seq.)
>C231354552
CP094968
Unclassified
Candidatus Vidania fulgoroideae [CP094968]
62789
62860
+
Sup
TTA
-
¡û
Identical group No.832357 (1 seq.)
>C231354526
CP094967
Unclassified
Candidatus Vidania fulgoroideae [CP094967]
62801
62872
+
Sup
TTA
-
¡û
Identical group No.834197 (1 seq.)
>W141143552
AWSN01000001
Unclassified
Parcubacteria bacterium RAAC4_OD1_1 [AWSN]
349784
349856
+
Sup
TTA
[ENA]
¡û
Identical group No.855842 (1 seq.)
>C231354501
CP094966
Unclassified
Candidatus Vidania fulgoroideae [CP094966]
62847
62918
+
Sup
TTA
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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