This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Vulcanimicrobiota
Anticodon = GAT
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.365110 (5 seq.)
>WENV183092571
OLLG01000192
[OLLG] soil metagenome; soil
12697
12621
-
Ile
GAT
[ENA]
¡û
>W2010578502
JAAXCW010000008
Vulcanimicrobiota
Candidatus Eremiobacteraeota bacterium [JAAXCW]
85824
85900
+
Ile
GAT
[ENA]
¡û
>W2010578913
JAAXLW010000006
Vulcanimicrobiota
Candidatus Eremiobacteraeota bacterium [JAAXLW]
1897
1821
-
Ile
GAT
[ENA]
¡û
>W2010578937
JAAXLY010000042
Vulcanimicrobiota
Candidatus Eremiobacteraeota bacterium [JAAXLY]
2221
2145
-
Ile
GAT
[ENA]
¡û
>W2010578982
JAAXMA010000007
Vulcanimicrobiota
Candidatus Eremiobacteraeota bacterium [JAAXMA]
9475
9399
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK