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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
metagenomic water samples (SRP000427)
Anticodon = CTA
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.653482 (174 seq.)
>W1711146167
LVIW01000324
Gammaproteobacteria
Shigella flexneri [LVIW]
31745
31819
+
Sup
CTA
[ENA]
¡û
>W1711330672
MBNY01000001
Gammaproteobacteria
Escherichia coli [MBNY]
2572177
2572103
-
Sup
CTA
[ENA]
¡û
>W1711602761
MOLI01000010
Gammaproteobacteria
Escherichia coli [MOLI]
7474
7400
-
Sup
CTA
[ENA]
¡û
>W1711774791
MVJG01000018
Gammaproteobacteria
Escherichia coli [MVJG]
86081
86007
-
Sup
CTA
[ENA]
¡û
>W1711938607
NARF01000030
Gammaproteobacteria
Escherichia coli [NARF]
7582
7508
-
Sup
CTA
[ENA]
¡û
>W1711938669
NARG01000017
Gammaproteobacteria
Escherichia coli [NARG]
33503
33577
+
Sup
CTA
[ENA]
¡û
>C171007608
CP011124
Gammaproteobacteria
Escherichia coli USML2 [CP011124]
4164487
4164561
+
Sup
CTA
-
¡û
>C171036008
CP015134
Gammaproteobacteria
Klebsiella pneumoniae ATCC 35657 [CP015134]
2773090
2773016
-
Sup
CTA
-
¡û
>C171057062
CP017100
Gammaproteobacteria
Escherichia coli K-12 NEB 5-alpha [CP017100]
591615
591541
-
Sup
CTA
-
¡û
>C171084096
CP018801
Gammaproteobacteria
Escherichia coli tolC- [CP018801]
3238865
3238939
+
Sup
CTA
-
¡û
>C171129525
LT615377
Gammaproteobacteria
Escherichia coli [LT615377]
693445
693371
-
Sup
CTA
-
¡û
>WENV180221224
OBAY01000270
[OBAY] human gut metagenome; human gut
7514
7440
-
Sup
CTA
[ENA]
¢þ
>WENV180222905
OBBF01000155
[OBBF] human gut metagenome; human gut
3798
3872
+
Sup
CTA
[ENA]
¢þ
>WENV180223695
OBBH01005095
[OBBH] human gut metagenome; human gut
629
703
+
Sup
CTA
[ENA]
¢þ
>WENV180236737
OBCW01000026
[OBCW] human gut metagenome; human gut
23071
23145
+
Sup
CTA
[ENA]
¢þ
>WENV180240231
OBDC01000788
[OBDC] human gut metagenome; human gut
3497
3571
+
Sup
CTA
[ENA]
¢þ
>WENV180246761
OBDQ01000241
[OBDQ] human gut metagenome; human gut
199
273
+
Sup
CTA
[ENA]
¢þ
>WENV180273802
OBGC01000030
[OBGC] soil metagenome; soil
7510
7436
-
Sup
CTA
[ENA]
¢þ
>WENV180273868
OBGD01000110
[OBGD] soil metagenome; soil
7530
7456
-
Sup
CTA
[ENA]
¢þ
>WENV180273938
OBGE01000034
[OBGE] soil metagenome; soil
7510
7436
-
Sup
CTA
[ENA]
¢þ
>WENV180273998
OBGF01000114
[OBGF] soil metagenome; soil
7514
7440
-
Sup
CTA
[ENA]
¢þ
>WENV180274043
OBGG01000044
[OBGG] soil metagenome; soil
1667
1593
-
Sup
CTA
[ENA]
¢þ
>WENV180274101
OBGH01000412
[OBGH] soil metagenome; soil
94
168
+
Sup
CTA
[ENA]
¢þ
>WENV180274160
OBGI01000300
[OBGI] soil metagenome; soil
201
275
+
Sup
CTA
[ENA]
¢þ
>WENV180274260
OBGN01000030
[OBGN] soil metagenome; soil
7510
7436
-
Sup
CTA
[ENA]
¢þ
>WENV180274306
OBGQ01000455
[OBGQ] soil metagenome; soil
292
218
-
Sup
CTA
[ENA]
¢þ
>WENV180274320
OBGS01000544
[OBGS] soil metagenome; soil
342
268
-
Sup
CTA
[ENA]
¢þ
>WENV180274425
OBGV01000066
[OBGV] soil metagenome; soil
608
682
+
Sup
CTA
[ENA]
¢þ
>WENV180274475
OBGZ01002708
[OBGZ] soil metagenome; soil
449
375
-
Sup
CTA
[ENA]
¢þ
>WENV180274604
OBHE01001090
[OBHE] human gut metagenome; human gut
159
85
-
Sup
CTA
[ENA]
¢þ
>WENV180286104
OBIE01000046
[OBIE] soil metagenome; soil
24975
25049
+
Sup
CTA
[ENA]
¢þ
>WENV180509764
OCFU01000035
[OCFU] soil metagenome; soil
7510
7436
-
Sup
CTA
[ENA]
¢þ
>WENV180509831
OCFV01000032
[OCFV] soil metagenome; soil
7514
7440
-
Sup
CTA
[ENA]
¢þ
>WENV180509898
OCFW01000030
[OCFW] soil metagenome; soil
7530
7456
-
Sup
CTA
[ENA]
¢þ
>WENV180510010
OCFZ01001429
[OCFZ] soil metagenome; soil
93
167
+
Sup
CTA
[ENA]
¢þ
>WENV180510099
OCGD01000032
[OCGD] soil metagenome; soil
7510
7436
-
Sup
CTA
[ENA]
¢þ
>WENV180510201
OCGH01000035
[OCGH] soil metagenome; soil
7510
7436
-
Sup
CTA
[ENA]
¢þ
>WENV180510296
OCGM01000035
[OCGM] soil metagenome; soil
7508
7434
-
Sup
CTA
[ENA]
¢þ
>WENV180510386
OCGO01000033
[OCGO] soil metagenome; soil
7510
7436
-
Sup
CTA
[ENA]
¢þ
>WENV180510454
OCGQ01000039
[OCGQ] soil metagenome; soil
32670
32744
+
Sup
CTA
[ENA]
¢þ
>WENV180510529
OCGR01000037
[OCGR] soil metagenome; soil
7514
7440
-
Sup
CTA
[ENA]
¢þ
>WENV180510595
OCGS01000035
[OCGS] soil metagenome; soil
7510
7436
-
Sup
CTA
[ENA]
¢þ
>WENV180510662
OCGU01000087
[OCGU] soil metagenome; soil
92
166
+
Sup
CTA
[ENA]
¢þ
>WENV180510736
OCGV01000037
[OCGV] soil metagenome; soil
33287
33361
+
Sup
CTA
[ENA]
¢þ
>WENV180510798
OCGW01000107
[OCGW] soil metagenome; soil
10994
11068
+
Sup
CTA
[ENA]
¢þ
>WENV180543905
OCIO01025511
[OCIO] human gut metagenome; human gut
354
280
-
Sup
CTA
[ENA]
¢þ
>WENV180544050
OCIP01000395
[OCIP] human gut metagenome; human gut
7514
7440
-
Sup
CTA
[ENA]
¢þ
>WENV180544470
OCIQ01012377
[OCIQ] human gut metagenome; human gut
215
289
+
Sup
CTA
[ENA]
¢þ
>WENV180544740
OCIR01008968
[OCIR] human gut metagenome; human gut
93
167
+
Sup
CTA
[ENA]
¢þ
>WENV180545244
OCIT01000035
[OCIT] human gut metagenome; human gut
7514
7440
-
Sup
CTA
[ENA]
¢þ
>WENV180548631
OCIX01012276
[OCIX] human gut metagenome; human gut
242
168
-
Sup
CTA
[ENA]
¢þ
>W141058170
AOYD01000070
Gammaproteobacteria
Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 19940 [AOYD]
36730
36804
+
Sup
CTA
[ENA]
¡û
>WENV181116083
OEFA01000069
[OEFA] human gut metagenome; human gut
32741
32815
+
Sup
CTA
[ENA]
¢þ
>WENV181190260
OEOQ01000040
[OEOQ] soil metagenome; soil
7568
7494
-
Sup
CTA
[ENA]
¢þ
>WENV181190333
OEOR01000158
[OEOR] soil metagenome; soil
4009
3935
-
Sup
CTA
[ENA]
¢þ
>WENV181190486
OEPL01005235
[OEPL] activated sludge metagenome; activated sludge
123
197
+
Sup
CTA
[ENA]
¢þ
>WENV181190548
OEPP01000087
[OEPP] soil metagenome; soil
608
682
+
Sup
CTA
[ENA]
¢þ
>C181118378
CP025520
Gammaproteobacteria
Escherichia coli DH5alpha [CP025520]
4088124
4088050
-
Sup
CTA
-
¡û
>C181167531
CP028702
Gammaproteobacteria
Escherichia coli J53 [CP028702]
1079783
1079709
-
Sup
CTA
-
¡û
>C181167645
CP028704
Gammaproteobacteria
Escherichia coli VH1 [CP028704]
3156721
3156795
+
Sup
CTA
-
¡û
>C181196776
CP031214
Gammaproteobacteria
Escherichia coli C600 [CP031214]
3224992
3225066
+
Sup
CTA
-
¡û
>C191063375
CP029239
Gammaproteobacteria
Escherichia coli BH212 [CP029239]
684489
684415
-
STOP
CTA
-
¡û
>C191128044
CP034595
Gammaproteobacteria
Escherichia coli WCHEC035053S1G0 [CP034595]
3099805
3099879
+
STOP
CTA
-
¡û
>C191181174
CP040663
Gammaproteobacteria
Escherichia coli EK2009 [CP040663]
685693
685619
-
STOP
CTA
-
¡û
>C191181260
CP040664
Gammaproteobacteria
Escherichia coli KR2009 [CP040664]
685013
684939
-
STOP
CTA
-
¡û
>C191181345
CP040667
Gammaproteobacteria
Escherichia coli S17-1 [CP040667]
2716404
2716478
+
STOP
CTA
-
¡û
>C191194945
LR134083
Gammaproteobacteria
Escherichia coli NCTC12655 [LR134083]
3185524
3185598
+
STOP
CTA
-
¡û
>W141822641
JRBB01000019
Gammaproteobacteria
Escherichia coli [JRBB]
7568
7494
-
Sup
CTA
[ENA]
¡û
>W1910034913
BEET01000069
Gammaproteobacteria
Enterobacter hormaechei TUM10679 [BEET]
12783
12709
-
STOP
CTA
[ENA]
¡û
>W1910213443
FMKC01000041
Gammaproteobacteria
Escherichia coli [FMKC]
33233
33307
+
STOP
CTA
[ENA]
¡û
>W1910815025
MVOX01000091
Gammaproteobacteria
Escherichia coli Tc-RA453.16 [MVOX]
24393
24467
+
STOP
CTA
[ENA]
¡û
>W1910815113
MVOZ01000009
Gammaproteobacteria
Escherichia coli Tc-S1257 [MVOZ]
2871
2945
+
STOP
CTA
[ENA]
¡û
>W1910815197
MVPA01000018
Gammaproteobacteria
Escherichia coli Tc-S1454 [MVPA]
7585
7511
-
STOP
CTA
[ENA]
¡û
>W1910815316
MVPB01000078
Gammaproteobacteria
Escherichia coli Tc-S356 [MVPB]
11298
11372
+
STOP
CTA
[ENA]
¡û
>W1910815379
MVPC01000113
Gammaproteobacteria
Escherichia coli Tc-RA372.16 [MVPC]
7587
7513
-
STOP
CTA
[ENA]
¡û
>W1910815452
MVPD01000080
Gammaproteobacteria
Escherichia coli Tc-RA402.16 [MVPD]
7585
7511
-
STOP
CTA
[ENA]
¡û
>W1910815529
MVPE01000065
Gammaproteobacteria
Escherichia coli Tc-RA229.16 [MVPE]
7587
7513
-
STOP
CTA
[ENA]
¡û
>W1910815595
MVPF01000086
Gammaproteobacteria
Escherichia coli Tc-RA346.16 [MVPF]
7587
7513
-
STOP
CTA
[ENA]
¡û
>W1910958604
NJTR01000039
Gammaproteobacteria
Escherichia coli MOD1-EC1831 [NJTR]
7590
7516
-
STOP
CTA
[ENA]
¡û
>W1911001161
NLEG01000002
Gammaproteobacteria
Klebsiella pneumoniae L48 [NLEG]
138980
138906
-
STOP
CTA
[ENA]
¡û
>W1810003701
BFAJ01000048
Gammaproteobacteria
Escherichia coli ME8077 [BFAJ]
7516
7442
-
STOP
CTA
[ENA]
¡û
>W1810003764
BFAK01000036
Gammaproteobacteria
Escherichia coli ME8162 [BFAK]
33361
33435
+
STOP
CTA
[ENA]
¡û
>W1810004066
BFAO01000044
Gammaproteobacteria
Escherichia coli R3 [BFAO]
33361
33435
+
STOP
CTA
[ENA]
¡û
>W1810011001
BGKK01000046
Gammaproteobacteria
Escherichia coli TUM1134 [BGKK]
7752
7678
-
STOP
CTA
[ENA]
¡û
>W1810011081
BGKL01000035
Gammaproteobacteria
Escherichia coli TUM1135 [BGKL]
7640
7566
-
STOP
CTA
[ENA]
¡û
>W1810011100
BGKL01000164
Gammaproteobacteria
Escherichia coli TUM1135 [BGKL]
125
51
-
STOP
CTA
[ENA]
¡û
>W1810011167
BGKM01000045
Gammaproteobacteria
Escherichia coli TUM1136 [BGKM]
7752
7678
-
STOP
CTA
[ENA]
¡û
>W1810012902
BGLI01000047
Gammaproteobacteria
Escherichia coli TUM1521 [BGLI]
7640
7566
-
STOP
CTA
[ENA]
¡û
>W1810012971
BGLJ01000155
Gammaproteobacteria
Escherichia coli TUM1522 [BGLJ]
7640
7566
-
STOP
CTA
[ENA]
¡û
>W1810013544
BGLQ01000120
Gammaproteobacteria
Escherichia coli TUM1809 [BGLQ]
7640
7566
-
STOP
CTA
[ENA]
¡û
>W1810013711
BGLS01000073
Gammaproteobacteria
Escherichia coli TUM1813 [BGLS]
7640
7566
-
STOP
CTA
[ENA]
¡û
>W1810013880
BGLU01000042
Gammaproteobacteria
Escherichia coli TUM1825 [BGLU]
7752
7678
-
STOP
CTA
[ENA]
¡û
>W1810013955
BGLV01000037
Gammaproteobacteria
Escherichia coli TUM1826 [BGLV]
7752
7678
-
STOP
CTA
[ENA]
¡û
>W1810225329
POVQ01000020
Gammaproteobacteria
Escherichia coli GX1-3T [POVQ]
7543
7469
-
STOP
CTA
[ENA]
¡û
>W1810276830
PSSV01000006
Gammaproteobacteria
Escherichia coli cont_1 [PSSV]
209183
209257
+
STOP
CTA
[ENA]
¡û
>SRA1004453
SRR006906.34982
metagenomic water samples (SRP000427)
1
75
+
Sup
CTA
[SRA]
>W1810344023
PVAA01000014
Gammaproteobacteria
Klebsiella pneumoniae subsp. pneumoniae 1424/2328 [PVAA]
11190
11116
-
STOP
CTA
[ENA]
¡û
>W1810381405
PXKZ01000001
Gammaproteobacteria
Klebsiella pneumoniae CRE25 [PXKZ]
59703
59777
+
STOP
CTA
[ENA]
¡û
>W1810381464
PXLA01000001
Gammaproteobacteria
Klebsiella pneumoniae CRE24 [PXLA]
59513
59587
+
STOP
CTA
[ENA]
¡û
>W1810382573
PXLR01000001
Gammaproteobacteria
Klebsiella pneumoniae CRE04 [PXLR]
59703
59777
+
STOP
CTA
[ENA]
¡û
>W1810599047
QGIK01000034
Gammaproteobacteria
Escherichia coli WCHEC025943C1G0 [QGIK]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810599122
QGIL01000036
Gammaproteobacteria
Escherichia coli WCHEC025943C1G1000LB [QGIL]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810599199
QGIM01000034
Gammaproteobacteria
Escherichia coli WCHEC025943C1G1000M9 [QGIM]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810599275
QGIN01000035
Gammaproteobacteria
Escherichia coli WCHEC025943C2G0 [QGIN]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810599351
QGIO01000037
Gammaproteobacteria
Escherichia coli WCHEC025943C2G1000LB [QGIO]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810599427
QGIP01000036
Gammaproteobacteria
Escherichia coli WCHEC025943C2G1000M9 [QGIP]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810599499
QGIQ01000035
Gammaproteobacteria
Escherichia coli WCHEC025943C3G1000M9 [QGIQ]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810599575
QGIR01000033
Gammaproteobacteria
Escherichia coli WCHEC035053S1G0 [QGIR]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810599651
QGIS01000033
Gammaproteobacteria
Escherichia coli WCHEC035053S1G0M9 [QGIS]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810599727
QGIT01000034
Gammaproteobacteria
Escherichia coli WCHEC035053S1G1000 [QGIT]
7565
7491
-
STOP
CTA
[ENA]
¡û
>W1810599802
QGIU01000033
Gammaproteobacteria
Escherichia coli WCHEC035053S1G1000M9 [QGIU]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810599954
QGIW01000033
Gammaproteobacteria
Escherichia coli WCHEC035053S2G0M9 [QGIW]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810600104
QGIY01000033
Gammaproteobacteria
Escherichia coli WCHEC035053S2G1000M9 [QGIY]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810600180
QGIZ01000035
Gammaproteobacteria
Escherichia coli WCHEC050604C1G0 [QGIZ]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810600256
QGJA01000034
Gammaproteobacteria
Escherichia coli WCHEC050604C1G0M9 [QGJA]
7565
7491
-
STOP
CTA
[ENA]
¡û
>W1810600483
QGJD01000035
Gammaproteobacteria
Escherichia coli WCHEC050604C2G0 [QGJD]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810600559
QGJE01000034
Gammaproteobacteria
Escherichia coli WCHEC050604C2G0M9 [QGJE]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810600635
QGJF01000036
Gammaproteobacteria
Escherichia coli WCHEC050604C2G1000 [QGJF]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810600710
QGJG01000036
Gammaproteobacteria
Escherichia coli WCHEC050604C2G1000M9 [QGJG]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810600787
QGJH01000035
Gammaproteobacteria
Escherichia coli WCHEC050604C3G0 [QGJH]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810600863
QGJI01000037
Gammaproteobacteria
Escherichia coli WCHEC050604C3G1000 [QGJI]
7565
7491
-
STOP
CTA
[ENA]
¡û
>W1810600931
QGJJ01000033
Gammaproteobacteria
Escherichia coli WCHEC050604C4G0 [QGJJ]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810601012
QGJK01000037
Gammaproteobacteria
Escherichia coli WCHEC050604C4G1000 [QGJK]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810601720
QGJT01000035
Gammaproteobacteria
Escherichia coli WCHEC050618C1G0 [QGJT]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810601796
QGJU01000034
Gammaproteobacteria
Escherichia coli WCHEC050618C1G0M9 [QGJU]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810601872
QGJV01000034
Gammaproteobacteria
Escherichia coli WCHEC050618C1G1000 [QGJV]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810601945
QGJW01000035
Gammaproteobacteria
Escherichia coli WCHEC050618C1G1000M9 [QGJW]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810602022
QGJX01000035
Gammaproteobacteria
Escherichia coli WCHEC050618C2G0 [QGJX]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810602098
QGJY01000034
Gammaproteobacteria
Escherichia coli WCHEC050618C2G0M9 [QGJY]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810602169
QGJZ01000035
Gammaproteobacteria
Escherichia coli WCHEC050618C2G1000 [QGJZ]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810602250
QGKA01000035
Gammaproteobacteria
Escherichia coli WCHEC050618C2G1000M9 [QGKA]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810602326
QGKB01000035
Gammaproteobacteria
Escherichia coli WCHEC050622C1G0 [QGKB]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810602402
QGKC01000035
Gammaproteobacteria
Escherichia coli WCHEC050622C1G0M9 [QGKC]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810602551
QGKE01000035
Gammaproteobacteria
Escherichia coli WCHEC050622C1G1000M9 [QGKE]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810602627
QGKF01000035
Gammaproteobacteria
Escherichia coli WCHEC050622C2G0 [QGKF]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810602703
QGKG01000034
Gammaproteobacteria
Escherichia coli WCHEC050622C2G0M9 [QGKG]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810602779
QGKH01000037
Gammaproteobacteria
Escherichia coli WCHEC050622C2G1000 [QGKH]
7571
7497
-
STOP
CTA
[ENA]
¡û
>W1810602852
QGKI01000034
Gammaproteobacteria
Escherichia coli WCHEC050622C2G1000M9 [QGKI]
33186
33260
+
STOP
CTA
[ENA]
¡û
>W1810634694
QIUF01000026
Gammaproteobacteria
Klebsiella pneumoniae SCPM-O-B-8392 [QIUF]
57038
56964
-
STOP
CTA
[ENA]
¡û
>W1810906651
QVGD01000035
Gammaproteobacteria
Escherichia coli SWEC456 [QVGD]
7694
7620
-
STOP
CTA
[ENA]
¡û
>C151056576
CP009644
Gammaproteobacteria
Escherichia coli ER2796 [CP009644]
693336
693262
-
Sup
CTA
[Ensembl]
¡û
>C151059850
CP009789
Gammaproteobacteria
Escherichia coli K-12 ER3413 [CP009789]
693337
693263
-
Sup
CTA
[Ensembl]
¡û
>C151069092
CP010438
Gammaproteobacteria
Escherichia coli K-12 ER3454 [CP010438]
1453190
1453116
-
Sup
CTA
[Ensembl]
¡û
>C151069178
CP010439
Gammaproteobacteria
Escherichia coli K-12 ER3440 [CP010439]
1438005
1437931
-
Sup
CTA
[Ensembl]
¡û
>C151069264
CP010440
Gammaproteobacteria
Escherichia coli K-12 ER3476 [CP010440]
1454414
1454340
-
Sup
CTA
[Ensembl]
¡û
>C151077235
CP011113
Gammaproteobacteria
Escherichia coli RR1 [CP011113]
679892
679818
-
Sup
CTA
-
¡û
>C151083342
CP011495
Gammaproteobacteria
Escherichia coli NCM3722 [CP011495]
1900379
1900305
-
Sup
CTA
[Ensembl]
¡û
>C151091319
CP012125
Gammaproteobacteria
Escherichia coli DH1Ec095 [CP012125]
686763
686689
-
Sup
CTA
[Ensembl]
¡û
>C151091404
CP012126
Gammaproteobacteria
Escherichia coli DH1Ec104 [CP012126]
686763
686689
-
Sup
CTA
[Ensembl]
¡û
>C151091489
CP012127
Gammaproteobacteria
Escherichia coli DH1Ec169 [CP012127]
685503
685429
-
Sup
CTA
[Ensembl]
¡û
>C151104601
LN832404
Gammaproteobacteria
Escherichia coli K-12 [LN832404]
693445
693371
-
Sup
CTA
[Ensembl]
¡û
>W1510055108
CCTH01000001
Gammaproteobacteria
Salmonella enterica subsp. enterica serovar Paratyphi A [CCTH]
4039990
4040064
+
Sup
CTA
[ENA]
¡û
>C10106220
CP001637
Gammaproteobacteria
Escherichia coli DH1 [CP001637]
3184615
3184689
+
Sup
CTA
-
¡û
>C11107902
AP012030
Gammaproteobacteria
Escherichia coli DH1 [AP012030]
686764
686690
-
Sup
CTA
-
¡û
>W1510752929
CYPX01000027
Gammaproteobacteria
Escherichia coli KRX [CYPX]
7459
7385
-
Sup
CTA
[ENA]
¡û
>W1511359348
JRYM01000022
Gammaproteobacteria
Escherichia coli DH5[alpha] DH5alpha [JRYM]
7475
7401
-
Sup
CTA
[ENA]
¡û
>W1511458268
JVJE01000052
Gammaproteobacteria
Klebsiella quasipneumoniae 385_ECLO [JVJE]
91
165
+
Sup
CTA
[ENA]
¡û
>W1511509717
JXRE01000010
Gammaproteobacteria
Escherichia coli USML2 [JXRE]
219586
219660
+
Sup
CTA
[ENA]
¡û
>W1511627106
LDAX01000006
Alphaproteobacteria
Rhizobium sp. KAs 5-22 [LDAX] KAs 5-22 [LDAX]
209183
209257
+
Sup
CTA
[ENA]
¡û
>W11177107
AFYG01000035
Gammaproteobacteria
Escherichia coli XH001 [AFYG]
33510
33584
+
Sup
CTA
[ENA]
¡û
>C121004547
CP003047
Gammaproteobacteria
Salmonella enterica subsp. enterica serovar Gallinarum/Pullorum RKS5078 [CP003047]
2294452
2294526
+
Sup
CTA
-
¡û
>C161093211
CP016018
Gammaproteobacteria
Escherichia coli ER1821R [CP016018]
3172976
3173050
+
Sup
CTA
-
¡û
>W1610020710
ASRI01000039
Gammaproteobacteria
Escherichia coli NCTC 50110 [ASRI]
33913
33987
+
Sup
CTA
[ENA]
¡û
>W121045063
AICK01000031
Gammaproteobacteria
Escherichia coli J53 [AICK]
2852
2926
+
Sup
CTA
[ENA]
¡û
>W1610186187
FBSE01000015
Gammaproteobacteria
Escherichia coli [FBSE]
7459
7385
-
Sup
CTA
[ENA]
¡û
>W1610438587
FJWV01000001
Gammaproteobacteria
Enterobacter hormaechei cloacae [FJWV]
653692
653766
+
Sup
CTA
[ENA]
¡û
>W1610448205
FKCB01000005
Gammaproteobacteria
Enterobacter hormaechei cloacae [FKCB]
150690
150616
-
Sup
CTA
[ENA]
¡û
>W1610501993
FLKR01000036
Gammaproteobacteria
Escherichia coli [FLKR]
7610
7536
-
Sup
CTA
[ENA]
¡û
>W1610957115
LVIW01000324
Gammaproteobacteria
Shigella flexneri [LVIW]
31745
31819
+
Sup
CTA
[ENA]
¡û
>W1611065460
MBNY01000001
Gammaproteobacteria
Escherichia coli [MBNY]
2572177
2572103
-
Sup
CTA
[ENA]
¡û
>W1710017576
ASRI01000039
Gammaproteobacteria
Escherichia coli NCTC 50110 [ASRI]
33913
33987
+
Sup
CTA
[ENA]
¡û
>W1710187803
FBSE01000015
Gammaproteobacteria
Escherichia coli [FBSE]
7459
7385
-
Sup
CTA
[ENA]
¡û
>W1710438215
FJWV01000001
Gammaproteobacteria
Enterobacter hormaechei cloacae [FJWV]
653692
653766
+
Sup
CTA
[ENA]
¡û
>W1710447833
FKCB01000005
Gammaproteobacteria
Enterobacter hormaechei cloacae [FKCB]
150690
150616
-
Sup
CTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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