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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
unclassified Herelleviridae
Anticodon = TAG
HIT:
3 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.297351 (1 seq.)
>PHG181007259
MG765277
unclassified Herelleviridae
Lactobacillus phage Bacchae (MG765277)
25431
25356
-
Leu
TAG
[ENA]
¡û
Identical group No.414299 (1 seq.)
>PHG181006128
MF787246
unclassified Herelleviridae
Lactobacillus phage LpeD (MF787246)
137792
137717
-
Leu
TAG
[ENA]
¡û
Identical group No.639006 (1 seq.)
>PHG181007266
MG765279
unclassified Herelleviridae
Lactobacillus phage Semele (MG765279)
87608
87534
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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