This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
unclassifiedviruses
Anticodon = CGG
HIT:
4 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.428289 (1 seq.)
>VRL181000561
KX853510
unclassifiedviruses
Virus Rctr197k (KX853510)
187989
187914
-
Pro
CGG
[ENA]
¡û
Identical group No.808947 (1 seq.)
>VRL181000394
KC977571
unclassifiedviruses
Pandoravirus salinus (KC977571)
84511
84581
+
Pro
CGG
[ENA]
¡û
Identical group No.808948 (3 seq.)
>VRL181000724
MG011689
unclassifiedviruses
Pandoravirus quercus (MG011689)
96870
96945
+
Pro
CGG
[ENA]
¡û
>VRL181000725
MG011690
unclassifiedviruses
Pandoravirus neocaledonia (MG011690)
57740
57810
+
Pro
CGG
[ENA]
¡û
>VRL181000726
MG011691
unclassifiedviruses
Pandoravirus macleodensis (MG011691)
59278
59348
+
Pro
CGG
[ENA]
¡û
Identical group No.833163 (1 seq.)
>VRL181000393
KC977570
unclassifiedviruses
Pandoravirus dulcis (KC977570)
60582
60652
+
Pro
CGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK