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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Anticodon = GAG
HIT:
4 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.138218 (1 seq.)
>SC0300002
NC_001139
Ascomycota
Saccharomyces cerevisiae S288c
700678
700761
+
Leu
GAG
[ENA]
¡û
Identical group No.139659 (1 seq.)
>FG090300006
CR382124
Ascomycota
Kluyveromyces lactis NRRL Y-1140
1309317
1309400
+
Leu
GAG
[ENA]
¡û
Identical group No.140272 (1 seq.)
>FG090300001
CR380950
Ascomycota
Candida glabrata CBS 138 CBS138
450102
450019
-
Leu
GAG
[ENA]
¡û
Identical group No.145857 (1 seq.)
>FG091300001
AE016814
Ascomycota
Ashbya gossypii ATCC 10895
517869
517951
+
Leu
GAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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