This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Anticodon = AGT
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.247539 (4 seq.)
>PHG181003819
KY223999
Siphoviridae
Mycobacterium phage MrMagoo (KY223999)
61725
61802
+
Thr
AGT
[ENA]
¡û
>PHG181004361
KY783914
Siphoviridae
Mycobacterium phage GardenSalsa (KY783914)
61724
61801
+
Thr
AGT
[ENA]
¡û
>PHG181005182
MF319184
Siphoviridae
Mycobacterium phage GenevaB15 (MF319184)
61529
61606
+
Thr
AGT
[ENA]
¡û
>PHG14100982
JF937105
Siphoviridae
Mycobacterium phage Rey (JF937105)
61696
61773
+
Thr
AGT
[ENA]
¡û
Identical group No.265117 (1 seq.)
>PHG181006814
MG515223
Podoviridae
Streptomyces phage WRightOn (MG515223)
18096
18171
+
Thr
AGT
[ENA]
¡û
Identical group No.265118 (1 seq.)
>PHG181006828
MG518519
Podoviridae
Streptomyces phage Manuel (MG518519)
17853
17928
+
Thr
AGT
[ENA]
¡û
Identical group No.323284 (3 seq.)
>PHG0100433
DQ398052
Siphoviridae
Mycobacterium phage Wildcat Brazil-1 (DQ398052)
61657
61731
+
Thr
AGT
[ENA]
¡û
>PHG181000806
KP027195
Siphoviridae
Mycobacterium phage Cosmo (KP027195)
61613
61687
+
Thr
AGT
[ENA]
¡û
>PHG181003974
KY385381
Siphoviridae
Mycobacterium phage EniyanLRS (KY385381)
61321
61395
+
Thr
AGT
[ENA]
¡û
Identical group No.504493 (2 seq.)
>PHG181007922
MH271300
Siphoviridae
Microbacterium phage Hortus1 (MH271300)
7101
7174
+
Thr
AGT
[ENA]
¡û
>PHG181007928
MH271307
Siphoviridae
Microbacterium phage OlinDD (MH271307)
7100
7173
+
Thr
AGT
[ENA]
¡û
Identical group No.536354 (1 seq.)
>PHG181007934
MH271310
Siphoviridae
Microbacterium phage Pioneer3 (MH271310)
7001
7074
+
Thr
AGT
[ENA]
¡û
Identical group No.549188 (2 seq.)
>PHG181008273
MH371109
Siphoviridae
Microbacterium phage Lyell (MH371109)
8419
8492
+
Thr
AGT
[ENA]
¡û
>PHG181008430
MH536823
Siphoviridae
Microbacterium phage Musetta (MH536823)
8498
8571
+
Thr
AGT
[ENA]
¡û
Identical group No.561458 (1 seq.)
>PHG181007835
MH155868
Podoviridae
Streptomyces phage FlowerPower (MH155868)
17752
17826
+
Thr
AGT
[ENA]
¡û
Identical group No.619437 (1 seq.)
>PHG181007943
MH271316
Siphoviridae
Microbacterium phage Tandem (MH271316)
7038
7111
+
Thr
AGT
[ENA]
¡û
Identical group No.744954 (3 seq.)
>PHG181001736
KT591491
Siphoviridae
Mycobacterium phage Bricole (KT591491)
60086
60158
+
Thr
AGT
[ENA]
¡û
>PHG14101328
JN699628
Siphoviridae
Mycobacterium phage Bongo (JN699628)
59938
60010
+
Thr
AGT
[ENA]
¡û
>PHG14102395
KC900379
Siphoviridae
Mycobacterium phage PegLeg phi47:1 (KC900379)
60706
60778
+
Thr
AGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK